Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G095200 Prunus persica HOM05D008852 ORTHO05D010731 8.9e-41 169.9 87 100.0
QL12p017912 Quercus lobata HOM05D008852 ORTHO05D010731 5.8e-16 87.4 86 54.7
CiPaw.12G095900 Carya illinoinensis HOM05D008852 ORTHO05D010731 8.4e-15 83.6 87 55.2
CiPaw.11G138500 Carya illinoinensis HOM05D008852 ORTHO05D010731 3.0e-12 75.1 87 52.9
Ciclev10023081m.g Citrus clementina HOM05D008852 ORTHO05D010731 5.6e-11 70.9 73 50.7
Glyma.05G205400 Glycine max HOM05D008852 ORTHO05D010731 5.6e-11 70.9 89 47.2
Hma1.2p1_0514F.1_g169790 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 7.3e-11 70.5 77 51.9
Hma1.2p1_3255F.1_g334555 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 7.3e-11 70.5 77 51.9
Cfa012137 Carpinus fangiana HOM05D008852 ORTHO05D010731 1.6e-10 69.3 87 48.3
Potri.001G107400 Populus trichocarpa HOM05D008852 ORTHO05D010731 1.6e-10 69.3 88 47.7
Glyma.08G012300 Glycine max HOM05D008852 ORTHO05D010731 2.1e-10 68.9 89 47.2
Phvul.002G287300 Phaseolus vulgaris HOM05D008852 ORTHO05D010731 6.2e-10 67.4 89 47.2
Haze_08906 Corylus avellana HOM05D008852 ORTHO05D010731 1.1e-09 66.6 87 49.4
Haze_08910 Corylus avellana HOM05D008852 ORTHO05D010731 1.1e-09 66.6 87 49.4
Thecc.03G275000 Theobroma cacao HOM05D008852 ORTHO05D010731 1.4e-09 66.2 87 44.8
Potri.003G124000 Populus trichocarpa HOM05D008852 ORTHO05D010731 2.4e-09 65.5 77 48.1
Manes.01G064900 Manihot esculenta HOM05D008852 ORTHO05D010731 3.1e-09 65.1 81 46.9
Manes.02G024700 Manihot esculenta HOM05D008852 ORTHO05D010731 9.0e-09 63.5 81 40.7
Lalb_Chr05g0224961 Lupinus albus HOM05D008852 ORTHO05D010731 2.0e-08 62.4 89 42.7
Medtr8g096970 Medicago truncatula HOM05D008852 ORTHO05D010731 5.8e-08 60.8 91 44.0
Eucgr.D01882 Eucalyptus grandis HOM05D008852 ORTHO05D010731 7.6e-08 60.5 87 42.5
Potri.002G228000 Populus trichocarpa HOM05D008852 ORTHO05D010731 9.9e-08 60.1 81 44.4
DCAR_008411 Daucus carota HOM05D008852 ORTHO05D010731 2.2e-07 58.9 87 42.5
Nn1g01419 Nelumbo nucifera HOM05D008852 ORTHO05D010731 2.9e-07 58.5 88 40.9
Gohir.A08G179900 Gossypium hirsutum HOM05D008852 ORTHO05D010731 6.4e-07 57.4 90 40.0
Lj4g0016563 Lotus japonicus HOM05D008852 ORTHO05D010731 6.4e-07 57.4 90 41.1
Lsat_1_v5_gn_6_6920 Lactuca sativa HOM05D066622 ORTHO05D010731 8.4e-07 57.0 90 38.9
Gohir.D08G198700 Gossypium hirsutum HOM05D008852 ORTHO05D010731 1.1e-06 56.6 90 40.0
Gorai.004G209500 Gossypium raimondii HOM05D008852 ORTHO05D010731 1.4e-06 56.2 90 40.0
Cc08_g14310 Coffea canephora HOM05D008852 ORTHO05D010731 3.2e-06 55.1 87 42.5
FAN04G1088 Fragaria x ananassa HOM05D008852 ORTHO05D010731 3.2e-06 55.1 47 61.7
Nn6g33541 Nelumbo nucifera HOM05D008852 ORTHO05D010731 4.2e-06 54.7 88 38.6


User provided reference genes

Program Settings