Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G091900 Prunus persica HOM05D006075 ORTHO05D007527 3.0e-271 937.9 479 100.0
MD06G1073700 Malus domestica HOM05D006075 ORTHO05D007527 2.4e-244 848.6 480 90.2
RcHm_v2.0_Chr7g0199111 Rosa chinensis HOM05D006075 ORTHO05D007527 3.3e-238 828.2 475 89.1
MD04G1066500 Malus domestica HOM05D006075 ORTHO05D007527 2.8e-229 798.5 443 90.7
FAN18G0544 Fragaria x ananassa HOM05D006075 ORTHO05D007527 4.5e-227 791.2 475 85.3
FAN08G0877 Fragaria x ananassa HOM05D006075 ORTHO05D007527 1.3e-226 789.6 475 85.1
FAN04G1557 Fragaria x ananassa HOM05D006075 ORTHO05D007527 3.8e-226 788.1 475 84.8
CiPaw.11G140500 Carya illinoinensis HOM05D006075 ORTHO05D007527 2.6e-206 722.2 481 77.5
CANSAT21G0515 Cannabis sativa HOM05D006075 ORTHO05D007527 1.3e-205 719.9 466 77.5
QL12p017421 Quercus lobata HOM05D006075 ORTHO05D007527 6.3e-205 717.6 473 75.7
Ciclev10019953m.g Citrus clementina HOM05D006075 ORTHO05D007527 1.0e-202 710.3 480 76.0
Potri.001G109200 Populus trichocarpa HOM05D006075 ORTHO05D007527 1.5e-201 706.4 469 75.9
FvH4_5g01570 Fragaria vesca HOM05D006075 ORTHO05D007527 3.2e-201 705.3 424 85.1
Atru.chr9.1549 Acer truncatum HOM05D006075 ORTHO05D007527 2.0e-198 696.0 473 75.5
Glyma.17G131000 Glycine max HOM05D006075 ORTHO05D007527 7.4e-198 694.1 468 76.1
Dinv37681 Davidia involucrata HOM05D006075 ORTHO05D007527 9.7e-198 693.7 449 77.7
Lj4g0025720 Lotus japonicus HOM05D006075 ORTHO05D007527 1.7e-197 693.0 469 75.5
Gohir.A01G010200 Gossypium hirsutum HOM05D006075 ORTHO05D007527 2.2e-197 692.6 469 74.8
Manes.01G066100 Manihot esculenta HOM05D006075 ORTHO05D007527 6.3e-197 691.0 480 74.2
Medtr4g102820 Medicago truncatula HOM05D006075 ORTHO05D007527 8.2e-197 690.6 481 73.2
TPR.G19222 Trifolium pratense HOM05D006075 ORTHO05D007527 3.1e-196 688.7 470 74.5
Gorai.002G011900 Gossypium raimondii HOM05D006075 ORTHO05D007527 1.2e-195 686.8 469 74.6
TPR.G23260 Trifolium pratense HOM05D006075 ORTHO05D007527 1.6e-195 686.4 469 74.0
Gohir.D01G009800 Gossypium hirsutum HOM05D006075 ORTHO05D007527 2.6e-195 685.6 469 74.2
TWI81G0173 Tripterygium wilfordii HOM05D006075 ORTHO05D007527 3.5e-195 685.3 466 75.8
Psat4g067760 Pisum sativum HOM05D006075 ORTHO05D007527 1.0e-194 683.7 480 73.1
Phvul.003G211900 Phaseolus vulgaris HOM05D006075 ORTHO05D007527 3.8e-194 681.8 468 73.9
Sabra01G0082500 Salix brachista HOM05D006075 ORTHO05D007527 8.5e-194 680.6 508 69.9
Thecc.02G127300 Theobroma cacao HOM05D006075 ORTHO05D007527 1.1e-193 680.2 475 72.2
GSVIVG01019817001 Vitis vinifera HOM05D006075 ORTHO05D007527 2.7e-192 675.6 455 74.7
Eucgr.E00536 Eucalyptus grandis HOM05D006075 ORTHO05D007527 3.6e-192 675.2 462 75.1
Psat1g082240 Pisum sativum HOM05D006075 ORTHO05D007527 3.6e-192 675.2 480 72.1
Rhsim07G0094000 Rhododendron simsii HOM05D006075 ORTHO05D007527 1.4e-191 673.3 488 71.1
Nn6g34229 Nelumbo nucifera HOM05D006075 ORTHO05D007527 2.3e-191 672.5 465 73.8
CSS0042428 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 2.0e-187 659.4 453 73.7
Lalb_Chr16g0389751 Lupinus albus HOM05D006075 ORTHO05D007527 4.5e-187 658.3 456 73.5
CsaV3_5G003210 Cucumis sativus L. HOM05D006075 ORTHO05D007527 5.0e-186 654.8 471 70.9
MELO3C005634.2 Cucumis melo HOM05D006075 ORTHO05D007527 8.5e-186 654.1 471 70.5
Lalb_Chr09g0333281 Lupinus albus HOM05D006075 ORTHO05D007527 1.5e-185 653.3 462 71.9
Lj2A193G48 Lonicera japonica HOM05D006075 ORTHO05D007527 3.2e-185 652.1 436 76.4
arahy.Tifrunner.gnm1.ann1.M2EVQD Arachis hypogaea HOM05D006075 ORTHO05D007527 2.7e-184 649.0 469 70.6
Oeu011664.1 Olea europaea HOM05D006075 ORTHO05D007527 6.1e-184 647.9 464 71.1
FAN08G0114 Fragaria x ananassa HOM05D006075 ORTHO05D007527 8.0e-184 647.5 413 81.8
Sed0007766 Sechium edule HOM05D006075 ORTHO05D007527 1.8e-183 646.4 468 70.7
FAN13G2280 Fragaria x ananassa HOM05D006075 ORTHO05D007527 4.0e-183 645.2 386 84.7
Sopen08g028750 Solanum pennellii HOM05D006075 ORTHO05D007527 2.0e-182 642.9 467 71.1
CAN.G981.23 Capsicum annuum HOM05D006075 ORTHO05D007527 4.4e-182 641.7 456 71.9
Solyc08g080420.4 Solanum lycopersicum HOM05D006075 ORTHO05D007527 1.7e-181 639.8 467 70.7
PSO478G2556 Papaver somniferum HOM05D006075 ORTHO05D007527 2.4e-180 636.0 466 68.5
PSO782G2103 Papaver somniferum HOM05D006075 ORTHO05D007527 5.9e-179 631.3 466 68.2
Cc08_g14070 Coffea canephora HOM05D006075 ORTHO05D007527 1.3e-178 630.2 453 72.6
THA.LOC104818186 Tarenaya hassleriana HOM05D006075 ORTHO05D007527 6.6e-178 627.9 469 69.1
MSTRG.13821 Avicennia marina HOM05D006075 ORTHO05D007527 5.5e-177 624.8 466 68.2
Thhalv10023435m.g Eutrema salsugineum HOM05D006075 ORTHO05D007527 1.6e-176 623.2 477 69.4
Sp2g01480 Schrenkiella parvula HOM05D006075 ORTHO05D007527 1.6e-176 623.2 459 71.2
Carub.0002s0185 Capsella rubella HOM05D006075 ORTHO05D007527 8.0e-176 620.9 469 68.9
AT1G63110 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 1.8e-175 619.8 470 68.3
Migut.E01290 Erythranthe guttata HOM05D006075 ORTHO05D007527 4.0e-175 618.6 473 67.9
arahy.Tifrunner.gnm1.ann1.S8HR28 Arachis hypogaea HOM05D006075 ORTHO05D007527 5.2e-175 618.2 469 68.4
AL2G12410 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 1.2e-174 617.1 468 69.7
ECA240G3011 Erigeron canadensis HOM05D006075 ORTHO05D007527 5.7e-174 614.8 468 67.1
BcaC04g22472 Brassica carinata HOM05D006075 ORTHO05D007527 1.7e-173 613.2 468 68.6
VMungo1215G1399 Vigna mungo HOM05D006075 ORTHO05D007527 2.2e-173 612.8 423 74.9
BcaB07g31383 Brassica carinata HOM05D006075 ORTHO05D007527 4.9e-173 611.7 467 67.7
A09p15680 Brassica napus HOM05D006075 ORTHO05D007527 6.3e-173 611.3 470 68.7
BraA09t37209Z Brassica rapa HOM05D006075 ORTHO05D007527 6.3e-173 611.3 470 68.7
Aa31LG2G590 Aethionema arabicum HOM05D006075 ORTHO05D007527 1.2e-171 607.1 483 66.7
C09p18910 Brassica napus HOM05D006075 ORTHO05D007527 2.0e-171 606.3 470 68.3
HanXRQChr03g0085661 Helianthus annuus HOM05D006075 ORTHO05D007527 2.3e-170 602.8 464 68.5
PGR042G3166 Punica granatum HOM05D006075 ORTHO05D007527 2.3e-170 602.8 464 67.9
Actinidia05225 Actinidia chinensis HOM05D006075 ORTHO05D007527 5.8e-166 588.2 470 67.4
Os02g0688900 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 1.4e-164 583.6 454 65.6
BolC9t54793H Brassica oleracea HOM05D006075 ORTHO05D007527 3.2e-164 582.4 473 66.6
EL10Ac5g12736 Beta vulgaris HOM05D006075 ORTHO05D007527 8.6e-162 574.3 439 66.7
AT1G12730 Arabidopsis thaliana HOM05D006075 ORTHO05D007527 1.2e-160 570.5 477 62.1
HPP92_001310 Vanilla planifolia HOM05D006075 ORTHO05D007527 4.0e-159 565.5 449 63.7
SalBow1G6580 Salvia bowleyana HOM05D006075 ORTHO05D007527 6.4e-157 558.1 571 53.9
Peaxi162Scf00714g00528 Petunia axillaris HOM05D006075 ORTHO05D007527 1.1e-156 557.4 537 57.9
Lsat_1_v5_gn_6_87521 Lactuca sativa HOM05D006075 ORTHO05D007527 7.1e-156 554.7 451 65.9
TAR629G3145 Trochodendron aralioides HOM05D006075 ORTHO05D007527 7.8e-155 551.2 370 74.3
SGA_v2.0_scaffold385G50455 Striga asiatica HOM05D006075 ORTHO05D007527 1.0e-154 550.8 469 62.7
CDE11G0531 Ceratophyllum demersum HOM05D006075 ORTHO05D007527 2.3e-154 549.7 456 62.1
Carub.0001s1243 Capsella rubella HOM05D006075 ORTHO05D007527 1.2e-152 543.9 459 61.9
vmacro13924 Vaccinium macrocarpon HOM05D006075 ORTHO05D007527 2.9e-149 532.7 457 62.6
ClCG01G003090 Citrullus lanatus HOM05D006075 ORTHO05D007527 1.4e-148 530.4 472 61.2
Manes.02G026900 Manihot esculenta HOM05D006075 ORTHO05D007527 1.7e-146 523.5 526 58.2
SEGI_27555 Sequoiadendron giganteum HOM05D006075 ORTHO05D007527 7.3e-145 518.1 460 57.8
COL.COLO4_32412 Corchorus olitorius HOM05D006075 ORTHO05D007527 2.1e-144 516.5 480 60.2
AL1G24320 Arabidopsis lyrata HOM05D006075 ORTHO05D007527 7.6e-142 508.1 461 59.7
Duzib052G1148 Durio zibethinus HOM05D006075 ORTHO05D007527 6.4e-141 505.0 469 59.5
TAR629G0535 Trochodendron aralioides HOM05D006075 ORTHO05D007527 1.2e-139 500.7 342 74.3
HanXRQChr11g0323321 Helianthus annuus HOM05D006075 ORTHO05D007527 1.5e-137 493.8 465 59.8
Nitab4.5_0002853g0070 Nicotiana tabacum HOM05D006075 ORTHO05D007527 1.1e-132 477.6 508 55.1
Nitab4.5_0016932g0010 Nicotiana tabacum HOM05D006075 ORTHO05D007527 5.6e-129 465.3 468 56.4
Sc01g0008740 Simmondsia chinensis HOM05D006075 ORTHO05D007527 5.6e-129 465.3 365 66.3
unitig_744.g24646 Utricularia gibba HOM05D006075 ORTHO05D007527 2.8e-128 463.0 468 55.6
PSO478G1113 Papaver somniferum HOM05D006075 ORTHO05D007527 2.0e-126 456.8 321 71.3
Glyma.05G049100 Glycine max HOM05D006075 ORTHO05D007527 2.7e-123 446.4 355 67.3
PGSC0003DMG400003033 Solanum tuberosum HOM05D006075 ORTHO05D007527 1.1e-116 424.5 446 54.0
CARHR013020 Cardamine hirsuta HOM05D006075 ORTHO05D007527 1.9e-113 413.7 371 58.2
ATR0322G053 Amborella trichopoda HOM05D006075 ORTHO05D007527 2.5e-113 413.3 330 63.9
Haze_08940 Corylus avellana HOM05D006075 ORTHO05D007527 6.9e-111 405.2 282 74.8
Mapoly0001s0316 Marchantia polymorpha HOM05D006075 ORTHO05D007527 2.9e-109 399.8 469 46.7
Pp3c9_23740 Physcomitrium patens HOM05D006075 ORTHO05D007527 2.9e-109 399.8 467 48.6
Ah.12g057560 Amaranthus hybridus HOM05D006075 ORTHO05D007527 3.9e-106 389.4 454 49.8
CARHR048400 Cardamine hirsuta HOM05D006075 ORTHO05D007527 5.7e-105 385.6 310 64.8
Hund14727 Selenicereus undatus HOM05D006075 ORTHO05D007527 1.8e-103 380.6 468 49.6
SMO270G0127 Selaginella moellendorffii HOM05D006075 ORTHO05D007527 1.7e-101 374.0 488 45.1
Sed0016840 Sechium edule HOM05D006075 ORTHO05D007527 1.5e-97 360.9 274 68.6
Zm00001eb251050 Zea mays HOM05D006075 ORTHO05D007527 1.0e-93 348.2 308 57.5
Cpa.g.sc74.79 Carica papaya HOM05D006075 ORTHO05D007527 1.9e-92 344.0 299 59.2
Dinv39003 Davidia involucrata HOM05D006075 ORTHO05D007527 2.8e-80 303.5 288 59.7
AagrBONN_evm.TU.Sc2ySwM_117.1004 Anthoceros agrestis HOM05D006075 ORTHO05D007527 1.2e-73 281.6 367 45.8
Os01g0870201 Oryza sativa ssp. japonica HOM05D006075 ORTHO05D007527 2.2e-69 267.3 459 39.4
CSS0009197 Camellia sinensis var. sinensis HOM05D006075 ORTHO05D007527 9.4e-68 261.9 416 41.8
CBR_g17923 Chara braunii HOM05D006075 ORTHO05D007527 9.8e-65 251.9 756 28.2
Ca_20251_v3 Cicer arietinum L. HOM05D006075 ORTHO05D007527 9.5e-60 235.3 156 75.6
TAR636G1294 Trochodendron aralioides HOM05D006075 ORTHO05D007527 4.9e-48 196.4 152 67.8
AUR62017286 Chenopodium quinoa HOM05D006075 ORTHO05D007527 1.0e-45 188.7 191 57.1
AUR62010644 Chenopodium quinoa HOM05D006075 ORTHO05D007527 7.3e-36 156.0 188 49.5
MCO15G123 Micromonas commoda HOM05D006075 ORTHO05D007527 2.6e-33 147.5 459 28.8
C09p15950 Brassica napus HOM05D006075 ORTHO05D007527 3.3e-28 130.6 88 73.9
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 5.6e-28 129.8 98 65.3
PRCOL_00005762 Prasinoderma coloniale HOM05D006075 ORTHO05D007527 2.4e-26 124.4 517 24.6
ATR0322G060 Amborella trichopoda HOM05D006075 ORTHO05D007527 4.4e-25 120.2 85 68.2
TAR636G2798 Trochodendron aralioides HOM05D006075 ORTHO05D007527 9.9e-25 119.0 67 83.6
BolC9t54506H Brassica oleracea HOM05D006075 ORTHO05D007527 2.7e-22 110.9 105 60.0
Actinidia27405 Actinidia chinensis HOM05D006075 ORTHO05D007527 2.7e-14 84.3 63 68.3
Cre03.g150400 Chlamydomonas reinhardtii HOM05D006075 ORTHO05D007527 1.8e-13 81.6 225 30.7
Pp3c15_22645 Physcomitrium patens HOM05D006075 ORTHO05D007527 3.6e-11 73.9 111 41.4
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 4.5e-09 67.0 70 50.0
Eucgr.A01818 Eucalyptus grandis HOM05D004519 ORTHO05D006283 7.9e-06 56.2 52 57.7


User provided reference genes

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