Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 1.2e-124 449.9 240 100.0
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.3e-110 403.3 237 90.3
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.1e-104 381.7 240 82.9
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 4.1e-104 381.7 240 82.9
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.0e-104 380.9 240 84.2
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 7.7e-103 377.5 249 81.1
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 4.0e-99 365.2 239 80.3
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 2.8e-97 359.0 241 80.1
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 5.4e-96 354.8 241 79.7
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 1.2e-95 353.6 244 77.5
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 1.6e-95 353.2 240 77.9
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.0e-95 352.8 241 79.3
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.9e-94 349.0 242 78.5
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 4.3e-93 345.1 244 75.4
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 7.3e-93 344.4 242 76.0
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 2.8e-92 342.4 242 76.9
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 8.0e-92 340.9 241 74.3
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 1.3e-89 333.6 245 73.9
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.2e-89 332.8 243 72.8
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 2.2e-89 332.8 241 73.4
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 2.9e-89 332.4 242 75.2
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 4.9e-89 331.6 242 73.6
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 4.9e-89 331.6 243 73.3
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 4.9e-89 331.6 240 75.8
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 8.3e-89 330.9 240 73.8
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 2.4e-88 329.3 240 73.8
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 9.2e-88 327.4 244 72.1
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 9.2e-88 327.4 241 71.8
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 9.2e-88 327.4 244 72.5
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 1.2e-87 327.0 243 71.6
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 1.6e-87 326.6 236 75.8
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 1.6e-87 326.6 204 83.8
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 5.9e-87 324.7 237 73.0
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 1.0e-86 323.9 214 77.1
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 3.9e-86 322.0 241 72.2
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 5.0e-86 321.6 245 71.0
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 6.6e-86 321.2 240 71.2
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 1.9e-85 319.7 242 69.0
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 4.3e-85 318.5 242 71.5
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 7.3e-85 317.8 213 75.1
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.2e-84 317.0 219 77.6
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 2.1e-84 316.2 246 69.1
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 2.1e-84 316.2 225 71.6
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.0e-83 313.9 241 68.5
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 1.4e-83 313.5 240 69.6
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 1.8e-83 313.2 246 68.7
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 2.3e-83 312.8 241 68.5
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 2.3e-83 312.8 252 69.0
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 4.0e-83 312.0 241 68.5
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 5.2e-83 311.6 215 74.9
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 6.8e-83 311.2 225 69.3
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.5e-82 310.1 241 66.4
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 2.0e-82 309.7 241 66.4
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 2.0e-82 309.7 240 67.9
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 2.0e-82 309.7 215 74.9
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 2.0e-82 309.7 243 68.3
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 7.5e-82 307.8 231 68.8
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 9.8e-82 307.4 229 70.7
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 1.3e-81 307.0 241 67.6
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 1.7e-81 306.6 241 67.2
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 1.7e-81 306.6 241 67.2
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 2.9e-81 305.8 242 67.4
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 2.9e-81 305.8 215 74.0
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 3.7e-81 305.4 238 66.8
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 3.7e-81 305.4 241 66.8
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 3.7e-81 305.4 241 67.2
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 3.7e-81 305.4 241 67.2
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 3.7e-81 305.4 240 68.8
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 3.7e-81 305.4 215 74.0
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 6.4e-81 304.7 215 71.6
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 1.9e-80 303.1 244 66.4
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 2.4e-80 302.8 241 66.8
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 2.4e-80 302.8 243 67.5
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 4.1e-80 302.0 246 66.7
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 5.4e-80 301.6 215 73.5
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 9.2e-80 300.8 242 66.9
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 6.6e-78 294.7 208 72.6
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.2e-76 290.4 250 62.4
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 4.7e-76 288.5 242 66.5
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 4.7e-76 288.5 247 61.9
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 6.2e-76 288.1 218 70.2
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 8.1e-76 287.7 224 66.1
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 1.4e-75 287.0 233 65.2
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 4.0e-75 285.4 241 66.0
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 2.6e-74 282.7 222 64.9
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 9.8e-74 280.8 234 66.2
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 4.1e-72 275.4 233 65.2
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 7.1e-72 274.6 242 60.3
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 2.7e-71 272.7 221 62.9
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 1.7e-70 270.0 240 62.9
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 2.3e-70 269.6 222 64.9
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 6.8e-67 258.1 190 72.1
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 5.8e-66 255.0 231 58.4
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 8.6e-62 241.1 222 59.0
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.9e-61 240.0 172 76.2
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 3.3e-61 239.2 246 58.9
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 1.1e-59 234.2 213 56.3
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 4.4e-58 228.8 243 53.1
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 1.7e-57 226.9 206 57.8
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 2.2e-49 199.9 227 48.5
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 9.9e-42 174.5 240 49.2
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 8.4e-41 171.4 163 60.1
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 2.1e-39 166.8 227 44.9
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.8e-38 163.7 99 85.9
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 1.9e-37 160.2 119 72.3
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 9.7e-29 131.3 117 65.8
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 4.1e-27 125.9 243 38.7
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.0e-25 121.3 79 78.5
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 5.0e-17 92.4 209 32.5
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 2.8e-12 76.6 59 64.4
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 8.2e-12 75.1 156 31.4
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 5.3e-11 72.4 52 69.2
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 6.5e-09 65.5 46 71.7


User provided reference genes

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