Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.7e-171 605.9 304 100.0
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 9.3e-162 573.5 304 93.8
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 5.5e-154 547.7 304 91.1
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 4.6e-153 544.7 304 90.5
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 7.9e-153 543.9 304 90.5
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.1e-151 540.0 304 89.5
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 7.2e-146 520.8 304 84.9
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 1.6e-145 519.6 303 84.5
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 3.6e-145 518.5 304 84.2
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 7.9e-145 517.3 304 84.2
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 1.0e-144 516.9 304 84.2
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 9.7e-143 510.4 299 83.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.3e-142 510.0 304 83.2
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 2.8e-142 508.8 302 81.5
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 5.3e-141 504.6 304 81.9
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 2.0e-140 502.7 304 82.6
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 3.4e-140 501.9 301 81.4
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 7.7e-140 500.7 304 82.6
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 1.0e-139 500.4 304 82.9
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.3e-139 500.0 304 81.9
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 2.2e-139 499.2 304 81.2
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 3.8e-139 498.4 304 79.9
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 79.9
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 82.2
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 78.9
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 4.2e-138 495.0 304 79.9
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.5e-138 494.6 304 80.6
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 7.2e-138 494.2 304 79.6
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 9.4e-138 493.8 304 78.6
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-137 493.4 302 80.8
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 1.2e-137 493.4 304 81.2
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 80.3
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 80.3
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 79.9
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.1e-137 492.7 299 81.3
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 4.7e-137 491.5 304 77.3
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 6.1e-137 491.1 304 79.3
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 3.0e-136 488.8 297 80.1
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 3.9e-136 488.4 304 78.6
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 3.9e-136 488.4 304 78.6
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 5.1e-136 488.0 304 77.3
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 5.1e-136 488.0 300 80.3
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 6.7e-136 487.6 304 78.6
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 6.7e-136 487.6 304 78.6
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 8.8e-136 487.3 300 80.7
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 8.8e-136 487.3 304 77.6
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 1.1e-135 486.9 304 78.6
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 2.0e-135 486.1 304 77.6
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 1.3e-134 483.4 304 78.3
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 2.2e-134 482.6 304 77.6
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 6.3e-134 481.1 304 77.3
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 1.1e-133 480.3 304 77.3
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 2.4e-133 479.2 304 77.3
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 7.0e-133 477.6 304 76.6
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 4.5e-132 474.9 304 76.3
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 4.5e-132 474.9 304 76.6
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.0e-131 473.8 304 76.6
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 3.8e-131 471.9 304 76.3
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 9.4e-130 467.2 306 75.5
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 2.1e-129 466.1 306 73.9
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 3.6e-129 465.3 306 73.5
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 3.6e-129 465.3 284 82.0
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 4.7e-129 464.9 306 74.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 4.7e-129 464.9 306 74.2
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 6.1e-129 464.5 306 74.2
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 1.0e-128 463.8 306 73.9
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.0e-128 463.8 304 74.7
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.4e-128 463.4 304 74.7
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 9.7e-127 457.2 305 74.8
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 4.8e-126 454.9 304 74.0
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 8.2e-126 454.1 306 72.5
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.1e-125 453.8 304 74.0
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.4e-125 453.4 306 74.5
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 2.4e-125 452.6 303 73.6
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 4.5e-124 448.4 304 73.0
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.3e-123 446.8 304 73.4
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 1.3e-123 446.8 300 74.0
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 3.8e-123 445.3 306 72.9
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 2.5e-122 442.6 306 73.2
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 9.4e-122 440.7 306 72.9
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 2.1e-121 439.5 300 73.0
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 6.1e-121 438.0 283 77.7
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 2.2e-115 419.5 304 67.8
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 8.5e-115 417.5 301 68.1
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.5e-114 416.8 294 72.4
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 7.2e-114 414.5 262 78.6
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 6.8e-112 407.9 304 68.1
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 2.0e-111 406.4 246 82.1
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 2.6e-111 406.0 301 66.8
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 4.8e-110 401.7 301 65.8
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 1.7e-107 393.3 266 74.4
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 6.6e-107 391.3 286 68.9
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.0e-99 367.5 305 60.7
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 2.5e-98 362.8 242 72.3
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 3.5e-92 342.4 220 76.4
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 3.5e-92 342.4 292 59.9
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 3.0e-91 339.3 230 72.6
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 2.5e-90 336.3 295 61.0
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 2.1e-89 333.2 302 56.3
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 4.0e-88 328.9 265 63.0
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 2.6e-87 326.2 299 55.9
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 4.1e-85 318.9 256 63.3
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.1e-81 306.6 196 76.0
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.7e-78 297.0 306 55.6
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 2.1e-76 290.0 302 50.7
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 1.7e-70 270.4 196 67.3
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 9.3e-69 264.6 315 45.4
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 3.6e-65 252.7 214 63.1
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 4.8e-57 225.7 303 46.5
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-54 217.2 143 76.2
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.9e-54 216.5 144 76.4
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.4e-53 212.2 144 74.3
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.7e-46 190.7 144 70.1
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 3.8e-46 189.5 317 38.2
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 4.2e-45 186.0 164 53.7
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.2e-39 167.9 364 31.9
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.5e-39 167.5 123 66.7
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-36 157.9 91 79.1
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 1.3e-35 154.5 263 41.8
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.3e-35 154.5 320 32.8
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.2e-30 137.1 80 80.0
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 3.6e-28 129.8 340 29.7
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 9.4e-13 78.6 43 81.4


User provided reference genes

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