Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 1.5e-127 459.5 233 100.0
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 8.6e-99 364.0 233 79.4
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 4.7e-97 358.2 228 79.8
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 1.0e-96 357.1 230 78.3
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 2.3e-96 355.9 236 77.5
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.0e-96 355.1 232 77.2
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 5.2e-96 354.8 232 75.9
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 6.8e-96 354.4 232 78.0
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 8.9e-96 354.0 233 76.4
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.6e-95 352.4 236 77.1
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.6e-95 352.4 235 76.6
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 1.3e-94 350.1 232 76.7
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 4.1e-93 345.1 230 73.9
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 5.4e-93 344.7 235 74.0
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.5e-92 342.0 240 72.9
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 6.0e-92 341.3 231 74.5
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 7.8e-92 340.9 228 75.4
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 7.8e-92 340.9 234 74.8
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 1.3e-91 340.1 233 73.8
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 3.0e-91 339.0 237 72.2
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.0e-91 339.0 256 68.4
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.9e-91 338.6 239 72.8
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 5.0e-91 338.2 232 74.1
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 5.0e-91 338.2 233 73.8
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 6.6e-91 337.8 225 76.4
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 6.6e-91 337.8 225 76.4
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 6.6e-91 337.8 238 71.4
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 8.6e-91 337.4 238 72.3
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 8.6e-91 337.4 233 72.5
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 8.6e-91 337.4 229 75.1
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.1e-90 337.0 233 73.0
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 1.9e-90 336.3 230 73.5
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 1.9e-90 336.3 228 75.0
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 1.9e-90 336.3 232 73.3
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.9e-90 336.3 236 72.5
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 2.5e-90 335.9 233 74.2
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.5e-90 335.9 233 72.5
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 4.3e-90 335.1 230 74.3
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 4.3e-90 335.1 228 75.0
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 5.6e-90 334.7 236 72.9
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 9.5e-90 334.0 230 73.0
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 1.2e-89 333.6 230 73.9
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 1.6e-89 333.2 232 72.4
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.6e-89 333.2 235 71.5
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 2.8e-89 332.4 233 71.2
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 3.6e-89 332.0 240 72.1
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.1e-88 330.5 245 68.2
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.4e-88 330.1 230 73.5
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.4e-88 330.1 225 74.7
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 1.4e-88 330.1 233 72.1
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 1.4e-88 330.1 229 72.1
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 2.3e-88 329.3 230 71.3
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 3.1e-88 328.9 230 74.3
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 4.0e-88 328.6 240 69.2
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 4.0e-88 328.6 228 73.2
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 4.0e-88 328.6 246 70.3
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 8.9e-88 327.4 230 71.7
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 8.9e-88 327.4 228 71.9
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.5e-87 326.6 231 71.9
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 3.4e-87 325.5 237 71.3
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 4.4e-87 325.1 230 72.2
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 5.8e-87 324.7 231 71.4
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 5.8e-87 324.7 232 68.1
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 9.8e-87 323.9 232 67.7
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 2.2e-86 322.8 229 72.5
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 2.9e-86 322.4 233 70.0
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 4.9e-86 321.6 231 71.0
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 4.9e-86 321.6 234 70.9
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 4.9e-86 321.6 223 74.4
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 6.4e-86 321.2 235 69.4
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 4.1e-85 318.5 271 62.4
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.6e-84 316.6 230 70.4
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 2.1e-84 316.2 178 83.7
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 3.5e-84 315.5 241 67.6
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 3.5e-84 315.5 281 61.6
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 4.6e-84 315.1 233 67.4
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 6.0e-84 314.7 232 69.0
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 7.8e-84 314.3 226 71.2
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 3.9e-83 312.0 303 57.4
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.1e-82 310.5 230 69.6
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.1e-82 310.5 201 74.1
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 4.3e-82 308.5 227 70.5
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 4.7e-81 305.1 191 77.0
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 3.1e-80 302.4 230 66.1
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 7.6e-79 297.7 293 56.3
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 1.9e-77 293.1 207 68.1
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 6.0e-76 288.1 199 74.4
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 2.3e-75 286.2 230 62.2
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 7.3e-74 281.2 231 64.5
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.6e-73 280.0 231 62.3
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 3.6e-73 278.9 233 62.7
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 1.3e-70 270.4 231 60.2
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 1.1e-69 267.3 186 74.2
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 5.4e-69 265.0 242 58.3
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 2.7e-68 262.7 163 76.1
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 5.1e-67 258.5 180 66.1
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 6.6e-67 258.1 386 43.3
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 7.3e-66 254.6 179 67.6
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 6.2e-65 251.5 232 58.6
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.4e-63 245.7 190 65.3
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 3.1e-56 222.6 180 58.9
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 5.6e-50 201.8 156 69.2
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.6e-47 193.0 161 64.0
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 4.9e-46 188.7 211 45.5
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 6.5e-46 188.3 155 65.2
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 2.4e-40 169.9 133 68.4
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 2.4e-40 169.9 133 68.4
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 7.6e-39 164.9 164 56.7
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 3.9e-35 152.5 220 38.6
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 2.2e-33 146.7 224 39.3
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 2.8e-33 146.4 140 58.6
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 4.5e-31 139.0 149 53.7
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 1.7e-30 137.1 149 53.7
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 1.1e-24 117.9 102 62.7
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 1.5e-23 114.0 139 45.3
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.9e-21 107.1 108 58.3
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 4.2e-21 105.9 80 66.2
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 2.7e-20 103.2 101 57.4
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 2.0e-18 97.1 54 75.9
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 1.4e-16 90.9 102 52.9
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 7.2e-13 78.6 75 48.0
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 5.2e-11 72.4 48 68.8


User provided reference genes

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