Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G072500 Prunus persica HOM05D015618 ORTHO05D010335 9.3e-84 313.5 163 100.0
MD00G1115000 Malus domestica HOM05D015618 ORTHO05D010335 6.3e-40 167.9 173 60.1
CiPaw.12G108600 Carya illinoinensis HOM05D009510 ORTHO05D010335 8.6e-21 104.4 179 39.7
RcHm_v2.0_Chr7g0202891 Rosa chinensis HOM05D015618 ORTHO05D010335 1.9e-20 103.2 185 46.5
Duzib205G1076 Durio zibethinus HOM05D009510 ORTHO05D010335 1.2e-19 100.5 173 39.3
Potri.001G122600 Populus trichocarpa HOM05D009510 ORTHO05D010335 1.6e-19 100.1 183 37.2
Duzib068G0669 Durio zibethinus HOM05D009510 ORTHO05D010335 4.7e-19 98.6 178 36.0
GSVIVG01001306001 Vitis vinifera HOM05D009510 ORTHO05D010335 1.8e-18 96.7 185 37.3
FvH4_5g00070 Fragaria vesca HOM05D015618 ORTHO05D010335 3.1e-18 95.9 176 41.5
Gohir.D12G222201 Gossypium hirsutum HOM05D009510 ORTHO05D010335 4.4e-17 92.0 176 37.5
FAN08G2540 Fragaria x ananassa HOM05D015618 ORTHO05D010335 5.8e-17 91.7 177 40.1
FAN13G2980 Fragaria x ananassa HOM05D015618 ORTHO05D010335 5.8e-17 91.7 174 40.8
FAN04G3221 Fragaria x ananassa HOM05D015618 ORTHO05D010335 7.5e-17 91.3 178 41.0
Thecc.03G254000 Theobroma cacao HOM05D009510 ORTHO05D010335 1.3e-16 90.5 180 33.9
Sabra01G0094500 Salix brachista HOM05D009510 ORTHO05D010335 1.7e-16 90.1 179 35.2
Gohir.A12G220001 Gossypium hirsutum HOM05D009510 ORTHO05D010335 3.7e-16 89.0 175 36.6
Gohir.D08G190400 Gossypium hirsutum HOM05D009510 ORTHO05D010335 3.7e-16 89.0 174 37.4
Gorai.008G238200 Gossypium raimondii HOM05D009510 ORTHO05D010335 4.9e-16 88.6 173 34.1
Gohir.A08G172100 Gossypium hirsutum HOM05D009510 ORTHO05D010335 1.9e-15 86.7 174 36.8
FAN18G0050 Fragaria x ananassa HOM05D015618 ORTHO05D010335 2.4e-15 86.3 191 38.7
Gorai.004G200500 Gossypium raimondii HOM05D009510 ORTHO05D010335 3.2e-15 85.9 174 36.8
Manes.01G079300 Manihot esculenta HOM05D009510 ORTHO05D010335 9.2e-15 84.3 178 33.7
Dinv21618 Davidia involucrata HOM05D009510 ORTHO05D010335 1.2e-14 84.0 185 34.6
Ciclev10022879m.g Citrus clementina HOM05D009510 ORTHO05D010335 3.0e-13 79.3 164 37.2
Hma1.2p1_0753F.1_g212990 Hydrangea macrophylla HOM05D009510 ORTHO05D010335 5.0e-13 78.6 189 33.3
Dinv39126 Davidia involucrata HOM05D009510 ORTHO05D010335 2.8e-11 72.8 184 32.1
DCAR_006823 Daucus carota HOM05D009510 ORTHO05D010335 4.7e-11 72.0 166 34.9
DCAR_027783 Daucus carota HOM05D009510 ORTHO05D010335 4.7e-11 72.0 157 32.5
Atru.chr9.1339 Acer truncatum HOM05D009510 ORTHO05D010335 6.2e-11 71.6 169 34.3
Glyma.11G031700 Glycine max HOM05D013054 ORTHO05D010335 6.2e-11 71.6 164 33.5
Phvul.002G062100 Phaseolus vulgaris HOM05D013054 ORTHO05D010335 1.1e-10 70.9 162 32.7
CSS0028488 Camellia sinensis var. sinensis HOM05D009510 ORTHO05D010335 1.4e-10 70.5 131 35.9
Cfa012745 Carpinus fangiana HOM05D009510 ORTHO05D010335 1.8e-10 70.1 89 47.2
Glyma.01G210300 Glycine max HOM05D013054 ORTHO05D010335 2.3e-10 69.7 172 33.1
DCAR_004946 Daucus carota HOM05D012984 ORTHO05D010335 6.8e-10 68.2 166 34.3
Lsat_1_v5_gn_6_91520 Lactuca sativa HOM05D012984 ORTHO05D010335 1.3e-08 63.9 159 34.6
TWI81G0126 Tripterygium wilfordii HOM05D009510 ORTHO05D010335 1.3e-08 63.9 124 35.5
VMungo1215G2077 Vigna mungo HOM05D013054 ORTHO05D010335 1.7e-08 63.5 170 32.4
Nitab4.5_0002727g0010 Nicotiana tabacum HOM05D012984 ORTHO05D010335 3.7e-08 62.4 163 29.4
PGSC0003DMG400004801 Solanum tuberosum HOM05D012984 ORTHO05D010335 6.4e-08 61.6 163 30.1
Haze_07883 Corylus avellana HOM05D009510 ORTHO05D010335 8.3e-08 61.2 68 50.0
Potri.001G123900 Populus trichocarpa HOM05D028323 ORTHO05D036648 1.9e-07 60.1 165 30.9
Migut.A00962 Erythranthe guttata HOM05D012984 ORTHO05D010335 3.2e-07 59.3 57 49.1
HanXRQChr03g0088641 Helianthus annuus HOM05D012984 ORTHO05D010335 3.2e-07 59.3 161 31.7
Nitab4.5_0000312g0200 Nicotiana tabacum HOM05D012984 ORTHO05D010335 3.2e-07 59.3 164 29.9
Medtr5g012400 Medicago truncatula HOM05D013054 ORTHO05D010335 2.7e-06 56.2 163 31.9
vmacro00232 Vaccinium macrocarpon HOM05D009510 ORTHO05D010335 3.5e-06 55.8 67 44.8
PGR042G1660 Punica granatum HOM05D015618 ORTHO05D010335 6.0e-06 55.1 71 43.7


User provided reference genes

Program Settings