Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 6.1e-160 567.4 277 100.0
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 2.3e-151 538.9 273 95.6
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 9.7e-150 533.5 271 93.7
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 1.1e-148 530.0 273 93.0
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 5.9e-147 524.2 272 91.9
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 7.7e-147 523.9 272 92.3
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 1.5e-145 519.6 272 91.2
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.0e-143 513.5 271 90.0
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 1.4e-143 513.1 274 90.9
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 5.2e-143 511.1 268 90.7
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 6.8e-143 510.8 268 90.7
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 6.8e-143 510.8 267 90.3
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 8.8e-143 510.4 273 87.5
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 1.2e-142 510.0 272 89.7
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 2.6e-142 508.8 273 89.0
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 3.4e-142 508.4 268 90.7
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 5.7e-142 507.7 272 88.6
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 1.7e-141 506.1 270 88.1
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 2.2e-141 505.8 273 87.9
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 2.8e-141 505.4 271 88.9
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 3.7e-141 505.0 273 87.9
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 3.7e-141 505.0 270 87.4
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 1.1e-140 503.4 272 86.0
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 1.4e-140 503.1 269 88.5
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 3.1e-140 501.9 273 86.8
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 9.1e-140 500.4 273 86.8
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 1.2e-139 500.0 279 86.0
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 1.6e-139 499.6 267 89.1
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 1.6e-139 499.6 271 87.5
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 2.0e-139 499.2 273 85.7
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 2.7e-139 498.8 273 86.8
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 3.5e-139 498.4 270 87.4
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 4.5e-139 498.0 267 88.8
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 5.9e-139 497.7 273 86.4
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 1.3e-138 496.5 271 85.2
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 2.2e-138 495.7 268 88.1
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 6.5e-138 494.2 267 87.6
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 1.1e-137 493.4 267 87.3
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 2.5e-137 492.3 271 86.3
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 2.5e-137 492.3 271 85.2
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 3.2e-137 491.9 270 87.4
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 7.2e-137 490.7 269 86.2
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 9.4e-137 490.3 267 86.9
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 2.1e-136 489.2 272 86.0
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 6.1e-136 487.6 271 83.4
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 8.0e-136 487.3 268 85.8
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 1.8e-135 486.1 268 84.7
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 5.2e-135 484.6 297 81.1
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 2.0e-134 482.6 267 84.3
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 5.7e-134 481.1 273 83.2
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 9.8e-134 480.3 272 83.8
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 1.3e-133 479.9 268 82.5
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 2.8e-133 478.8 268 81.3
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 8.3e-133 477.2 270 82.6
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 2.4e-132 475.7 268 82.5
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 2.4e-132 475.7 268 82.5
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 4.1e-132 474.9 273 81.7
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 7.0e-132 474.2 270 83.0
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 7.0e-132 474.2 268 82.1
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 9.1e-132 473.8 270 81.1
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 9.1e-132 473.8 266 83.1
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 9.1e-132 473.8 266 82.7
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 9.1e-132 473.8 270 82.2
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 1.6e-131 473.0 268 82.1
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 2.0e-131 472.6 270 83.0
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 2.0e-131 472.6 272 82.0
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 2.0e-131 472.6 270 82.6
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 3.5e-131 471.9 268 81.0
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 5.9e-131 471.1 273 80.6
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 1.3e-130 469.9 282 80.5
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.9e-130 468.8 273 80.2
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 2.9e-130 468.8 263 83.7
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 8.6e-130 467.2 270 81.9
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 1.1e-129 466.8 267 84.3
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 1.5e-129 466.5 267 84.3
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 1.9e-129 466.1 272 80.5
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 5.6e-129 464.5 258 84.5
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 5.6e-129 464.5 276 81.2
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 9.5e-129 463.8 258 84.5
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 1.6e-128 463.0 268 81.3
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 2.8e-128 462.2 274 80.7
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 3.7e-125 451.8 268 81.0
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.8e-124 449.5 262 80.9
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 8.6e-122 440.7 272 76.1
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 3.6e-120 435.3 227 91.2
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 1.1e-116 423.7 268 74.6
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 1.2e-115 420.2 276 74.3
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 1.5e-110 403.3 223 85.2
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 2.6e-110 402.5 297 68.0
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 1.9e-108 396.4 205 92.7
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 1.7e-106 389.8 270 69.6
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 8.6e-106 387.5 208 88.9
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 5.8e-102 374.8 270 68.5
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 3.7e-101 372.1 270 67.0
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 7.1e-100 367.9 189 92.1
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 7.1e-100 367.9 273 65.6
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 3.0e-98 362.5 189 89.9
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 2.8e-88 329.3 212 75.5
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 1.2e-86 323.9 185 83.2
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 4.2e-76 288.9 145 93.8
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 5.3e-71 271.9 134 94.0
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 1.2e-54 217.6 118 88.1
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 4.5e-54 215.7 118 85.6
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 3.8e-53 212.6 128 78.9
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.2e-52 209.5 120 85.0
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 9.4e-52 208.0 119 84.9
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 9.4e-52 208.0 119 84.9
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 1.0e-50 204.5 119 84.9
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.6e-49 199.9 120 82.5
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 1.0e-45 188.0 106 80.2
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 1.5e-33 147.5 94 74.5
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 2.5e-20 103.6 57 80.7
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 6.6e-13 79.0 54 72.2
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 1.1e-12 78.2 54 70.4
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 1.5e-12 77.8 54 72.2
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 8.0e-11 72.0 54 66.7
Pp3s34_460 Physcomitrium patens HOM05D001684 ORTHO05D018939 1.8e-10 70.9 288 27.1
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 2.0e-09 67.4 42 73.8
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 3.4e-09 66.6 212 27.8
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 4.9e-08 62.8 63 52.4
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 1.8e-07 60.8 206 26.7


User provided reference genes

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