Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G057000 Prunus persica HOM05D021026 ORTHO05D000261 4.2e-284 980.7 502 100.0
Prupe.5G057400 Prunus persica HOM05D000268 ORTHO05D000261 4.0e-109 399.4 468 53.6
MD11G1279700 Malus domestica HOM05D000268 ORTHO05D000261 2.3e-85 320.5 562 42.9
RcHm_v2.0_Chr7g0215601 Rosa chinensis HOM05D000268 ORTHO05D000261 2.2e-67 260.8 545 39.1
MD04G1052400 Malus domestica HOM05D000268 ORTHO05D000261 5.3e-61 239.6 550 35.5
FAN18G1186 Fragaria x ananassa HOM05D000268 ORTHO05D000261 3.2e-58 230.3 549 36.8
FAN13G2621 Fragaria x ananassa HOM05D000268 ORTHO05D000261 1.5e-55 221.5 550 36.5
FvH4_5g25380 Fragaria vesca HOM05D000268 ORTHO05D000261 4.2e-50 203.4 516 35.3
Cfa015776 Carpinus fangiana HOM05D000268 ORTHO05D000261 6.3e-30 136.3 533 28.5
Haze_00719 Corylus avellana HOM05D000268 ORTHO05D000261 2.6e-23 114.4 512 28.1
Haze_00718 Corylus avellana HOM05D000268 ORTHO05D000261 7.2e-18 96.3 204 37.7
Cfa015777 Carpinus fangiana HOM05D000268 ORTHO05D000261 6.1e-17 93.2 180 39.4
CiPaw.12G053300 Carya illinoinensis HOM05D000268 ORTHO05D000261 1.0e-16 92.4 523 26.0
RcHm_v2.0_Chr7g0225631 Rosa chinensis HOM05D000268 ORTHO05D000261 1.1e-15 89.0 206 36.4
Haze_00723 Corylus avellana HOM05D000268 ORTHO05D000261 7.4e-15 86.3 221 33.9
TAR629G0829 Trochodendron aralioides HOM05D000268 ORTHO05D000261 2.2e-14 84.7 484 25.6
TWI81G0682 Tripterygium wilfordii HOM05D000268 ORTHO05D000261 2.8e-14 84.3 447 25.5
FvH4_5g30740 Fragaria vesca HOM05D021026 ORTHO05D197667 1.1e-13 82.4 204 38.2
RcHm_v2.0_Chr7g0205131 Rosa chinensis HOM05D021026 ORTHO05D000261 5.3e-13 80.1 93 51.6
TWI60G1215 Tripterygium wilfordii HOM05D000268 ORTHO05D000261 1.2e-12 79.0 551 23.6
Manes.01G087700 Manihot esculenta HOM05D000268 ORTHO05D000261 1.6e-12 78.6 474 24.9
Ciclev10023329m.g Citrus clementina HOM05D000268 ORTHO05D000261 1.3e-11 75.5 264 28.4
Atru.chr9.1218 Acer truncatum HOM05D000268 ORTHO05D000261 2.5e-10 71.2 348 29.0
QL12p008941 Quercus lobata HOM05D000268 ORTHO05D000261 1.6e-09 68.6 422 24.9
PGR042G0065 Punica granatum HOM05D000268 ORTHO05D000261 1.0e-08 65.9 102 40.2
FvH4_4g20661 Fragaria vesca HOM05D021026 ORTHO05D045518 2.3e-08 64.7 80 42.5
FAN12G2129 Fragaria x ananassa HOM05D021026 ORTHO05D045518 2.3e-08 64.7 80 42.5
Manes.02G044625 Manihot esculenta HOM05D000268 ORTHO05D000261 2.3e-08 64.7 467 23.3
Potri.003G083100 Populus trichocarpa HOM05D000268 ORTHO05D000261 3.0e-08 64.3 164 32.3
Hma1.2p1_1008F.1_g247200 Hydrangea macrophylla HOM05D000268 ORTHO05D000261 4.0e-08 63.9 251 29.5
MELO3C013901.2 Cucumis melo HOM05D000268 ORTHO05D000261 8.8e-08 62.8 534 22.5
Eucgr.E00362 Eucalyptus grandis HOM05D000268 ORTHO05D000261 8.8e-08 62.8 139 33.1
MBI04_g13848_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D000261 8.8e-08 62.8 398 25.9
RcHm_v2.0_Chr7g0204991 Rosa chinensis HOM05D000268 ORTHO05D000261 1.2e-07 62.4 173 34.7
MSTRG.25884 Avicennia marina HOM05D000268 ORTHO05D000261 3.4e-07 60.8 342 27.8
Sabra03G0053800 Salix brachista HOM05D000268 ORTHO05D000261 5.7e-07 60.1 169 33.1
CsaV3_3G002320 Cucumis sativus L. HOM05D000268 ORTHO05D000261 1.3e-06 58.9 52 53.8
Thecc.03G242100 Theobroma cacao HOM05D000268 ORTHO05D000261 1.7e-06 58.5 66 45.5
Sed0022367 Sechium edule HOM05D000268 ORTHO05D000261 3.7e-06 57.4 533 21.6
Duzib084G0431 Durio zibethinus HOM05D000268 ORTHO05D000261 8.3e-06 56.2 66 47.0
RcHm_v2.0_Chr7g0205081 Rosa chinensis HOM05D000268 ORTHO05D000261 8.3e-06 56.2 41 63.4


User provided reference genes

Program Settings