Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G056600 Prunus persica HOM05D000859 ORTHO05D000668 1.6e-32 142.1 70 100.0
Prupe.5G056000 Prunus persica HOM05D000859 ORTHO05D000668 4.1e-28 127.5 70 90.0
Prupe.5G056800 Prunus persica HOM05D000859 ORTHO05D000668 6.9e-28 126.7 68 91.2
Prupe.5G055800 Prunus persica HOM05D000859 ORTHO05D000668 2.0e-27 125.2 67 92.5
Prupe.5G056400 Prunus persica HOM05D000859 ORTHO05D000668 2.2e-26 121.7 68 88.2
Prupe.4G061100 Prunus persica HOM05D000859 ORTHO05D000668 1.6e-11 72.4 71 56.3
arahy.Tifrunner.gnm1.ann1.QA5KMM Arachis hypogaea HOM05D000859 ORTHO05D000668 2.7e-08 61.6 53 50.9
Gohir.A08G234700 Gossypium hirsutum HOM05D000859 ORTHO05D000668 8.0e-08 60.1 69 40.6
TAR624G1301 Trochodendron aralioides HOM05D000298 ORTHO05D001098 8.0e-08 60.1 60 53.3
Gohir.D08G255100 Gossypium hirsutum HOM05D000859 ORTHO05D000668 1.0e-07 59.7 69 39.1
Gorai.004G272200 Gossypium raimondii HOM05D000859 ORTHO05D000668 1.0e-07 59.7 69 39.1
Lj6g0028130 Lotus japonicus HOM05D000859 ORTHO05D000668 1.0e-07 59.7 58 44.8
Atru.chr10.1670 Acer truncatum HOM05D000859 ORTHO05D000668 1.4e-07 59.3 57 47.4
Medtr2g016020 Medicago truncatula HOM05D000859 ORTHO05D000668 1.4e-07 59.3 63 42.9
QL06p036387 Quercus lobata HOM05D000859 ORTHO05D000668 2.3e-07 58.5 61 45.9
Sed0005484 Sechium edule HOM05D000859 ORTHO05D000668 2.3e-07 58.5 63 39.7
Ciclev10024378m.g Citrus clementina HOM05D000859 ORTHO05D000668 4.0e-07 57.8 58 53.4
MELO3C007213.2 Cucumis melo HOM05D000859 ORTHO05D000668 5.2e-07 57.4 63 42.9
CsaV3_6G050870 Cucumis sativus L. HOM05D000859 ORTHO05D000668 5.2e-07 57.4 63 42.9
CsaV3_6G050880 Cucumis sativus L. HOM05D000859 ORTHO05D000668 5.2e-07 57.4 63 42.9
MD10G1280200 Malus domestica HOM05D000859 ORTHO05D000668 5.2e-07 57.4 62 48.4
Prupe.7G067400 Prunus persica HOM05D000859 ORTHO05D000668 6.7e-07 57.0 70 47.1
Sed0024043 Sechium edule HOM05D000859 ORTHO05D000668 6.7e-07 57.0 63 41.3
CiPaw.09G069600 Carya illinoinensis HOM05D000859 ORTHO05D000668 8.8e-07 56.6 65 46.2
Oeu037957.1 Olea europaea HOM05D000859 ORTHO05D000668 8.8e-07 56.6 59 44.1
FvH4_3g07791 Fragaria vesca HOM05D000859 ORTHO05D000668 1.2e-06 56.2 63 42.9
MD05G1301300 Malus domestica HOM05D000859 ORTHO05D000668 1.2e-06 56.2 62 46.8
Cfa000605 Carpinus fangiana HOM05D000859 ORTHO05D000668 2.0e-06 55.5 66 42.4
MELO3C015539.2 Cucumis melo HOM05D000859 ORTHO05D000668 2.0e-06 55.5 61 41.0
Gohir.D05G341400 Gossypium hirsutum HOM05D000859 ORTHO05D000668 2.0e-06 55.5 65 40.0
Gohir.D05G341600 Gossypium hirsutum HOM05D000859 ORTHO05D000668 2.0e-06 55.5 66 42.4
Gorai.009G368100 Gossypium raimondii HOM05D000859 ORTHO05D000668 2.0e-06 55.5 65 40.0
CsaV3_1G041280 Cucumis sativus L. HOM05D000859 ORTHO05D000668 2.6e-06 55.1 61 41.0
Duzib160G0214 Durio zibethinus HOM05D000859 ORTHO05D000668 2.6e-06 55.1 60 48.3
FAN11G3578 Fragaria x ananassa HOM05D000298 ORTHO05D001098 2.6e-06 55.1 64 39.1
FAN16G0283 Fragaria x ananassa HOM05D000298 ORTHO05D001098 2.6e-06 55.1 64 39.1
FAN25G2164 Fragaria x ananassa HOM05D000298 ORTHO05D000668 2.6e-06 55.1 64 39.1
Oeu009529.1 Olea europaea HOM05D000859 ORTHO05D000668 2.6e-06 55.1 59 42.4
RcHm_v2.0_Chr5g0010771 Rosa chinensis HOM05D000859 ORTHO05D000668 2.6e-06 55.1 63 41.3
Oeu026724.1 Olea europaea HOM05D000859 ORTHO05D000668 3.3e-06 54.7 59 42.4
TPR.G11763 Trifolium pratense HOM05D000859 ORTHO05D000668 3.3e-06 54.7 61 37.7
TAR627G0866 Trochodendron aralioides HOM05D000859 ORTHO05D000668 3.3e-06 54.7 55 47.3
Lj4g0008965 Lotus japonicus HOM05D000859 ORTHO05D000668 4.4e-06 54.3 60 41.7
Oeu009532.1 Olea europaea HOM05D000859 ORTHO05D000668 4.4e-06 54.3 59 44.1
Thecc.06G171000 Theobroma cacao HOM05D000859 ORTHO05D000668 4.4e-06 54.3 60 48.3
BcaC06g35401 Brassica carinata HOM05D000859 ORTHO05D000668 5.7e-06 53.9 56 42.9
A07p10940 Brassica napus HOM05D000859 ORTHO05D000668 5.7e-06 53.9 56 42.9
A08p25310 Brassica napus HOM05D000859 ORTHO05D000668 5.7e-06 53.9 56 42.9
C03p75530 Brassica napus HOM05D000859 ORTHO05D000668 5.7e-06 53.9 56 42.9
C07p16560 Brassica napus HOM05D000859 ORTHO05D000668 5.7e-06 53.9 56 42.9
BolC3t19810H Brassica oleracea HOM05D000859 ORTHO05D000668 5.7e-06 53.9 56 42.9
BolC7t42153H Brassica oleracea HOM05D000859 ORTHO05D000668 5.7e-06 53.9 56 42.9
BraA07t28882Z Brassica rapa HOM05D000859 ORTHO05D000668 5.7e-06 53.9 56 42.9
BraA08t34482Z Brassica rapa HOM05D000859 ORTHO05D000668 5.7e-06 53.9 56 42.9
CiPaw.10G058800 Carya illinoinensis HOM05D000859 ORTHO05D000668 5.7e-06 53.9 65 44.6
Lalb_Chr07g0186471 Lupinus albus HOM05D000859 ORTHO05D000668 5.7e-06 53.9 63 39.7
TPR.G11675 Trifolium pratense HOM05D000859 ORTHO05D000668 5.7e-06 53.9 61 37.7
Duzib192G0878 Durio zibethinus HOM05D000859 ORTHO05D000668 7.5e-06 53.5 56 46.4
FAN21G1075 Fragaria x ananassa HOM05D000298 ORTHO05D000668 7.5e-06 53.5 64 37.5
Gohir.A04G041600 Gossypium hirsutum HOM05D000859 ORTHO05D000668 7.5e-06 53.5 60 43.3
Hund21176 Selenicereus undatus HOM05D000859 ORTHO05D000668 7.5e-06 53.5 65 40.0
Ca_00434_v3 Cicer arietinum L. HOM05D000859 ORTHO05D000668 9.7e-06 53.1 61 37.7
ClCG03G007730 Citrullus lanatus HOM05D000859 ORTHO05D000668 9.7e-06 53.1 55 45.5
ClCG03G014880 Citrullus lanatus HOM05D000859 ORTHO05D000668 9.7e-06 53.1 60 38.3
COL.COLO4_31301 Corchorus olitorius HOM05D000859 ORTHO05D000668 9.7e-06 53.1 67 44.8
Duzib192G0632 Durio zibethinus HOM05D000859 ORTHO05D000668 9.7e-06 53.1 56 46.4
Eucgr.E02748 Eucalyptus grandis HOM05D000859 ORTHO05D000668 9.7e-06 53.1 61 45.9
Oeu021686.1 Olea europaea HOM05D000859 ORTHO05D000668 9.7e-06 53.1 58 43.1


User provided reference genes

Program Settings