Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G056000 Prunus persica HOM05D000859 ORTHO05D000668 3.6e-32 141.0 70 100.0
Prupe.5G056800 Prunus persica HOM05D000859 ORTHO05D000668 8.2e-29 129.8 68 92.6
Prupe.5G055800 Prunus persica HOM05D000859 ORTHO05D000668 1.8e-28 128.6 67 94.0
Prupe.5G056600 Prunus persica HOM05D000859 ORTHO05D000668 9.1e-28 126.3 70 90.0
Prupe.5G056400 Prunus persica HOM05D000859 ORTHO05D000668 2.6e-27 124.8 68 89.7
Prupe.4G061100 Prunus persica HOM05D000859 ORTHO05D000668 2.4e-12 75.1 71 57.7
Lj6g0028130 Lotus japonicus HOM05D000859 ORTHO05D000668 2.5e-09 65.1 63 47.6
arahy.Tifrunner.gnm1.ann1.QA5KMM Arachis hypogaea HOM05D000859 ORTHO05D000668 4.2e-09 64.3 63 47.6
Atru.chr10.1670 Acer truncatum HOM05D000859 ORTHO05D000668 7.2e-09 63.5 66 45.5
TAR624G1301 Trochodendron aralioides HOM05D000298 ORTHO05D001098 2.1e-08 62.0 65 50.8
Gohir.D08G255100 Gossypium hirsutum HOM05D000859 ORTHO05D000668 6.1e-08 60.5 69 40.6
Gorai.004G272200 Gossypium raimondii HOM05D000859 ORTHO05D000668 6.1e-08 60.5 69 40.6
Medtr2g016020 Medicago truncatula HOM05D000859 ORTHO05D000668 1.0e-07 59.7 63 46.0
Ciclev10024378m.g Citrus clementina HOM05D000859 ORTHO05D000668 1.4e-07 59.3 60 51.7
RcHm_v2.0_Chr5g0010771 Rosa chinensis HOM05D000859 ORTHO05D000668 1.4e-07 59.3 65 44.6
A08p25310 Brassica napus HOM05D000859 ORTHO05D000668 1.8e-07 58.9 63 44.4
C03p75530 Brassica napus HOM05D000859 ORTHO05D000668 1.8e-07 58.9 63 44.4
BolC3t19810H Brassica oleracea HOM05D000859 ORTHO05D000668 1.8e-07 58.9 63 44.4
BraA08t34482Z Brassica rapa HOM05D000859 ORTHO05D000668 1.8e-07 58.9 63 44.4
MELO3C007213.2 Cucumis melo HOM05D000859 ORTHO05D000668 1.8e-07 58.9 63 44.4
CsaV3_6G050870 Cucumis sativus L. HOM05D000859 ORTHO05D000668 1.8e-07 58.9 63 44.4
CsaV3_6G050880 Cucumis sativus L. HOM05D000859 ORTHO05D000668 1.8e-07 58.9 63 44.4
Gohir.A08G234700 Gossypium hirsutum HOM05D000859 ORTHO05D000668 2.3e-07 58.5 69 40.6
MD10G1280200 Malus domestica HOM05D000859 ORTHO05D000668 2.3e-07 58.5 66 48.5
VMungo0540G2369 Vigna mungo HOM05D000859 ORTHO05D000668 2.3e-07 58.5 64 45.3
BcaB03g13904 Brassica carinata HOM05D000859 ORTHO05D000668 3.0e-07 58.2 63 44.4
BcaC06g35401 Brassica carinata HOM05D000859 ORTHO05D000668 3.0e-07 58.2 63 44.4
A07p10940 Brassica napus HOM05D000859 ORTHO05D000668 3.0e-07 58.2 63 44.4
C07p16560 Brassica napus HOM05D000859 ORTHO05D000668 3.0e-07 58.2 63 44.4
BolC7t42153H Brassica oleracea HOM05D000859 ORTHO05D000668 3.0e-07 58.2 63 44.4
BraA07t28882Z Brassica rapa HOM05D000859 ORTHO05D000668 3.0e-07 58.2 63 44.4
Gohir.D05G341600 Gossypium hirsutum HOM05D000859 ORTHO05D000668 3.0e-07 58.2 66 43.9
Sed0005484 Sechium edule HOM05D000859 ORTHO05D000668 3.0e-07 58.2 63 39.7
CiPaw.10G058800 Carya illinoinensis HOM05D000859 ORTHO05D000668 4.0e-07 57.8 65 47.7
Oeu037957.1 Olea europaea HOM05D000859 ORTHO05D000668 4.0e-07 57.8 59 44.1
Cfa000605 Carpinus fangiana HOM05D000859 ORTHO05D000668 5.2e-07 57.4 66 43.9
MD05G1301300 Malus domestica HOM05D000859 ORTHO05D000668 5.2e-07 57.4 66 47.0
Sed0024043 Sechium edule HOM05D000859 ORTHO05D000668 5.2e-07 57.4 63 41.3
MELO3C015539.2 Cucumis melo HOM05D000859 ORTHO05D000668 6.7e-07 57.0 64 43.8
Duzib192G0878 Durio zibethinus HOM05D000859 ORTHO05D000668 6.7e-07 57.0 65 43.1
Gohir.D05G341400 Gossypium hirsutum HOM05D000859 ORTHO05D000668 6.7e-07 57.0 65 40.0
Gorai.009G368100 Gossypium raimondii HOM05D000859 ORTHO05D000668 6.7e-07 57.0 65 40.0
Oeu009529.1 Olea europaea HOM05D000859 ORTHO05D000668 6.7e-07 57.0 63 41.3
QL06p036387 Quercus lobata HOM05D000859 ORTHO05D000668 6.7e-07 57.0 61 44.3
CiPaw.09G069600 Carya illinoinensis HOM05D000859 ORTHO05D000668 8.8e-07 56.6 65 46.2
Duzib192G0632 Durio zibethinus HOM05D000859 ORTHO05D000668 8.8e-07 56.6 65 43.1
Thhalv10008921m.g Eutrema salsugineum HOM05D000859 ORTHO05D000668 8.8e-07 56.6 63 41.3
Lalb_Chr07g0186471 Lupinus albus HOM05D000859 ORTHO05D000668 8.8e-07 56.6 63 41.3
Sp1g25070 Schrenkiella parvula HOM05D000859 ORTHO05D000668 8.8e-07 56.6 57 43.9
Aa31LG6G6400 Aethionema arabicum HOM05D000859 ORTHO05D000668 1.2e-06 56.2 64 40.6
CARHR028450 Cardamine hirsuta HOM05D000859 ORTHO05D000668 1.2e-06 56.2 69 44.9
Glyma.15G082300 Glycine max HOM05D000859 ORTHO05D000668 1.2e-06 56.2 63 39.7
Gohir.A04G041600 Gossypium hirsutum HOM05D000859 ORTHO05D000668 1.2e-06 56.2 64 42.2
Prupe.7G067400 Prunus persica HOM05D000859 ORTHO05D000668 1.2e-06 56.2 70 47.1
Hund21176 Selenicereus undatus HOM05D000859 ORTHO05D000668 1.2e-06 56.2 65 43.1
Cpa.g.sc7.68 Carica papaya HOM05D000859 ORTHO05D000668 1.5e-06 55.8 69 42.0
Duzib160G0214 Durio zibethinus HOM05D000859 ORTHO05D000668 1.5e-06 55.8 65 44.6
Thecc.06G171000 Theobroma cacao HOM05D000859 ORTHO05D000668 1.5e-06 55.8 69 43.5
TAR627G0866 Trochodendron aralioides HOM05D000859 ORTHO05D000668 1.5e-06 55.8 63 42.9
AL1G42850 Arabidopsis lyrata HOM05D000859 ORTHO05D000668 2.0e-06 55.5 63 41.3
FvH4_3g07791 Fragaria vesca HOM05D000859 ORTHO05D000668 2.0e-06 55.5 63 41.3
Glyma.13G230300 Glycine max HOM05D000859 ORTHO05D000668 2.0e-06 55.5 63 39.7
Gohir.A04G041800 Gossypium hirsutum HOM05D000859 ORTHO05D000668 2.0e-06 55.5 65 38.5
Oeu026724.1 Olea europaea HOM05D000859 ORTHO05D000668 2.0e-06 55.5 63 39.7
Phvul.006G176500 Phaseolus vulgaris HOM05D000859 ORTHO05D000668 2.0e-06 55.5 63 41.3
QL05p047069 Quercus lobata HOM05D000859 ORTHO05D000668 2.0e-06 55.5 66 47.0
AT1G29140 Arabidopsis thaliana HOM05D000859 ORTHO05D000668 2.6e-06 55.1 63 41.3
Duzib213G0436 Durio zibethinus HOM05D000859 ORTHO05D000668 2.6e-06 55.1 65 40.0
Oeu009532.1 Olea europaea HOM05D000859 ORTHO05D000668 2.6e-06 55.1 63 41.3
TPR.G11763 Trifolium pratense HOM05D000859 ORTHO05D000668 2.6e-06 55.1 61 37.7
Oeu021686.1 Olea europaea HOM05D000859 ORTHO05D000668 3.3e-06 54.7 58 43.1
Carub.0001s2734 Capsella rubella HOM05D000859 ORTHO05D000668 4.4e-06 54.3 63 39.7
CsaV3_1G041280 Cucumis sativus L. HOM05D000859 ORTHO05D000668 4.4e-06 54.3 61 41.0
TPR.G11675 Trifolium pratense HOM05D000859 ORTHO05D000668 4.4e-06 54.3 61 37.7
BcaC05g26930 Brassica carinata HOM05D000859 ORTHO05D000668 5.7e-06 53.9 63 41.3
A09p37190 Brassica napus HOM05D000859 ORTHO05D000668 5.7e-06 53.9 63 41.3
C05p27830 Brassica napus HOM05D000859 ORTHO05D000668 5.7e-06 53.9 63 41.3
BolC5t31504H Brassica oleracea HOM05D000859 ORTHO05D000668 5.7e-06 53.9 63 41.3
BraA09t39235Z Brassica rapa HOM05D000859 ORTHO05D000668 5.7e-06 53.9 63 41.3
Oeu021685.1 Olea europaea HOM05D000859 ORTHO05D000668 5.7e-06 53.9 56 44.6
Ca_00434_v3 Cicer arietinum L. HOM05D000859 ORTHO05D000668 7.5e-06 53.5 61 37.7
Dinv14982 Davidia involucrata HOM05D000859 ORTHO05D035060 7.5e-06 53.5 64 40.6
Dinv18356 Davidia involucrata HOM05D000859 ORTHO05D000668 7.5e-06 53.5 61 41.0
Duzib213G0926 Durio zibethinus HOM05D000859 ORTHO05D000668 7.5e-06 53.5 65 40.0
Eucgr.E02748 Eucalyptus grandis HOM05D000859 ORTHO05D000668 7.5e-06 53.5 66 45.5
THA.LOC104798425 Tarenaya hassleriana HOM05D000859 ORTHO05D000668 7.5e-06 53.5 66 36.4
ClCG03G007730 Citrullus lanatus HOM05D000859 ORTHO05D000668 9.7e-06 53.1 63 42.9
ClCG03G014880 Citrullus lanatus HOM05D000859 ORTHO05D000668 9.7e-06 53.1 58 39.7
Lalb_Chr18g0054501 Lupinus albus HOM05D000859 ORTHO05D000668 9.7e-06 53.1 61 41.0
Oeu026723.1 Olea europaea HOM05D000859 ORTHO05D000668 9.7e-06 53.1 58 43.1
Sed0026604 Sechium edule HOM05D000859 ORTHO05D000668 9.7e-06 53.1 62 40.3


User provided reference genes

Program Settings