Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G039400 Prunus persica HOM05D007324 ORTHO05D007884 4.7e-30 134.4 99 100.0
MD06G1032700 Malus domestica HOM05D007324 ORTHO05D007884 1.1e-13 80.1 90 54.4
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 2.4e-10 68.9 52 76.9
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.2e-09 66.6 52 71.2
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 2.7e-09 65.5 52 71.2
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 4.6e-09 64.7 52 69.2
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 7.8e-09 63.9 52 69.2
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 1.0e-08 63.5 94 47.9
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 1.3e-08 63.2 52 73.1
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 1.3e-08 63.2 52 71.2
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 1.3e-08 63.2 52 71.2
MBI04_g22943_MAGBIO Magnolia biondii HOM05D007324 ORTHO05D007884 1.7e-08 62.8 52 69.2
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 2.3e-08 62.4 52 69.2
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 3.9e-08 61.6 52 65.4
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 3.9e-08 61.6 52 71.2
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 5.1e-08 61.2 52 69.2
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 8.6e-08 60.5 52 69.2
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 1.9e-07 59.3 52 63.5
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 1.9e-07 59.3 52 69.2
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 4.3e-07 58.2 52 67.3
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 4.3e-07 58.2 91 44.0
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 5.6e-07 57.8 52 65.4
Lj4g0022663 Lotus japonicus HOM05D007324 ORTHO05D007884 5.6e-07 57.8 46 71.7
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 5.6e-07 57.8 52 65.4
CDE12G0317 Ceratophyllum demersum HOM05D007324 ORTHO05D007884 7.3e-07 57.4 52 61.5
Gohir.D08G178000 Gossypium hirsutum HOM05D007324 ORTHO05D007884 7.3e-07 57.4 52 63.5
Gorai.004G186200 Gossypium raimondii HOM05D007324 ORTHO05D007884 7.3e-07 57.4 52 63.5
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 7.3e-07 57.4 52 63.5
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 9.5e-07 57.0 52 63.5
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 1.6e-06 56.2 52 61.5
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 1.6e-06 56.2 52 59.6
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 2.1e-06 55.8 52 65.4
Gohir.A08G157700 Gossypium hirsutum HOM05D007324 ORTHO05D007884 2.8e-06 55.5 52 61.5
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 3.6e-06 55.1 52 63.5
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 6.2e-06 54.3 47 66.0
TPR.G29033 Trifolium pratense HOM05D007324 ORTHO05D007884 6.2e-06 54.3 90 61.1
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 6.2e-06 54.3 52 69.2
Manes.15G168800 Manihot esculenta HOM05D007324 ORTHO05D007884 8.1e-06 53.9 51 60.8
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 8.1e-06 53.9 46 69.6


User provided reference genes

Program Settings