Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G038500 Prunus persica HOM05D004120 ORTHO05D004951 2.8e-208 728.4 370 100.0
MD00G1220600 Malus domestica HOM05D004120 ORTHO05D004951 3.3e-185 651.7 371 90.0
FvH4_5g21880 Fragaria vesca HOM05D004120 ORTHO05D004951 2.4e-164 582.4 368 82.1
FAN18G3415 Fragaria x ananassa HOM05D004120 ORTHO05D004951 5.4e-164 581.3 368 81.8
FAN04G1856 Fragaria x ananassa HOM05D004120 ORTHO05D004951 1.5e-161 573.2 368 81.0
RcHm_v2.0_Chr7g0209431 Rosa chinensis HOM05D004120 ORTHO05D004951 1.9e-161 572.8 369 80.5
GSVIVG01013166001 Vitis vinifera HOM05D004120 ORTHO05D004951 1.4e-156 556.6 374 79.1
Dinv28953 Davidia involucrata HOM05D004120 ORTHO05D004951 9.3e-156 553.9 362 80.1
Hma1.2p1_0585F.1_g183700 Hydrangea macrophylla HOM05D004120 ORTHO05D004951 7.9e-155 550.8 373 77.7
Dinv25212 Davidia involucrata HOM05D004120 ORTHO05D004951 2.1e-152 542.7 378 76.5
CSS0046330 Camellia sinensis var. sinensis HOM05D004120 ORTHO05D004951 2.8e-152 542.3 369 77.5
CiPaw.11G092700 Carya illinoinensis HOM05D004120 ORTHO05D004951 3.1e-151 538.9 369 77.2
arahy.Tifrunner.gnm1.ann1.482M5A Arachis hypogaea HOM05D004120 ORTHO05D004951 5.3e-151 538.1 370 74.9
arahy.Tifrunner.gnm1.ann1.G7H05W Arachis hypogaea HOM05D004120 ORTHO05D004951 5.3e-151 538.1 370 74.9
CANSAT21G2618 Cannabis sativa HOM05D004120 ORTHO05D004951 2.6e-150 535.8 377 74.8
Cfa012429 Carpinus fangiana HOM05D004120 ORTHO05D004951 3.4e-150 535.4 374 76.2
TAR629G2715 Trochodendron aralioides HOM05D004120 ORTHO05D004951 5.8e-150 534.6 339 82.0
CiPaw.12G063200 Carya illinoinensis HOM05D004120 ORTHO05D004951 1.3e-149 533.5 369 77.0
Manes.17G013200 Manihot esculenta HOM05D004120 ORTHO05D004951 1.1e-148 530.4 353 78.8
Nn6g33597 Nelumbo nucifera HOM05D004120 ORTHO05D004951 1.1e-148 530.4 343 79.9
PGSC0003DMG402001159 Solanum tuberosum HOM05D004120 ORTHO05D004951 3.0e-146 522.3 372 72.6
Nn1g00518 Nelumbo nucifera HOM05D004120 ORTHO05D004951 5.1e-146 521.5 367 76.3
QL12p005624 Quercus lobata HOM05D004120 ORTHO05D004951 1.5e-145 520.0 364 76.6
Lsat_1_v5_gn_6_79560 Lactuca sativa HOM05D004120 ORTHO05D004951 3.3e-145 518.8 368 74.5
Sopen08g001030 Solanum pennellii HOM05D004120 ORTHO05D004951 3.3e-145 518.8 372 72.8
Ca_24652_v3 Cicer arietinum L. HOM05D004120 ORTHO05D004951 5.7e-145 518.1 357 75.4
VMungo1215G0016 Vigna mungo HOM05D004120 ORTHO05D004951 5.7e-145 518.1 373 74.0
DCAR_008274 Daucus carota HOM05D004120 ORTHO05D004951 7.4e-145 517.7 371 73.3
CAN.G1216.15 Capsicum annuum HOM05D004120 ORTHO05D004951 1.3e-144 516.9 371 73.3
Phvul.002G007300 Phaseolus vulgaris HOM05D004120 ORTHO05D004951 1.6e-144 516.5 373 73.2
TWI81G0459 Tripterygium wilfordii HOM05D004120 ORTHO05D004951 2.1e-144 516.2 365 75.9
PGR031G2717 Punica granatum HOM05D004120 ORTHO05D004951 3.7e-144 515.4 361 74.5
Sed0006792 Sechium edule HOM05D004120 ORTHO05D004951 3.7e-144 515.4 370 74.1
ClCG10G001730 Citrullus lanatus HOM05D004120 ORTHO05D004951 4.8e-144 515.0 377 74.0
Cc08_g02620 Coffea canephora HOM05D004120 ORTHO05D004951 2.4e-143 512.7 379 73.6
Eucgr.D02191 Eucalyptus grandis HOM05D004120 ORTHO05D004951 4.0e-143 511.9 335 80.6
AUR62018721 Chenopodium quinoa HOM05D004120 ORTHO05D004951 6.9e-143 511.1 376 72.9
Ciclev10031866m.g Citrus clementina HOM05D004120 ORTHO05D004951 9.0e-143 510.8 376 72.9
Medtr5g014430 Medicago truncatula HOM05D004120 ORTHO05D004951 2.0e-142 509.6 362 74.6
Cpa.g.sc239.7 Carica papaya HOM05D004120 ORTHO05D004951 2.6e-142 509.2 346 77.5
CsaV3_3G001840 Cucumis sativus L. HOM05D004120 ORTHO05D004951 7.6e-142 507.7 370 73.0
MELO3C013859.2 Cucumis melo HOM05D004120 ORTHO05D004951 2.2e-141 506.1 373 72.9
Rhsim11G0014500 Rhododendron simsii HOM05D004120 ORTHO05D004951 8.4e-141 504.2 363 73.8
COL.COLO4_17048 Corchorus olitorius HOM05D004120 ORTHO05D004951 1.9e-140 503.1 297 85.2
Oeu053047.1 Olea europaea HOM05D004120 ORTHO05D004951 2.5e-140 502.7 368 72.6
Aqoxy3G02384 Aquilegia oxysepala HOM05D004120 ORTHO05D004951 3.2e-140 502.3 378 70.6
Potri.001G143400 Populus trichocarpa HOM05D004120 ORTHO05D004951 4.2e-140 501.9 341 76.0
Glyma.11G043400 Glycine max HOM05D004120 ORTHO05D004951 5.5e-140 501.5 362 74.0
Gohir.D08G177300 Gossypium hirsutum HOM05D004120 ORTHO05D004951 5.5e-140 501.5 377 71.6
Lj2g0014948 Lotus japonicus HOM05D004120 ORTHO05D004951 7.1e-140 501.1 365 72.3
TPR.G7833 Trifolium pratense HOM05D004120 ORTHO05D004951 7.1e-140 501.1 372 72.0
EL10Ac5g12129 Beta vulgaris HOM05D004120 ORTHO05D004951 9.3e-140 500.7 367 73.8
Thecc.03G228600 Theobroma cacao HOM05D004120 ORTHO05D004951 9.3e-140 500.7 380 72.1
Oeu028027.1 Olea europaea HOM05D004120 ORTHO05D004951 2.7e-139 499.2 368 71.2
Duzib084G1060 Durio zibethinus HOM05D004120 ORTHO05D004951 6.1e-139 498.0 371 72.2
Lalb_Chr16g0379111 Lupinus albus HOM05D004120 ORTHO05D004951 6.1e-139 498.0 373 70.8
ECA240G4620 Erigeron canadensis HOM05D004120 ORTHO05D004951 7.9e-139 497.7 368 73.4
Gohir.A08G156900 Gossypium hirsutum HOM05D004120 ORTHO05D004951 5.1e-138 495.0 366 72.4
HanXRQChr03g0084021 Helianthus annuus HOM05D004120 ORTHO05D004951 5.1e-138 495.0 371 71.2
MSTRG.13757 Avicennia marina HOM05D004120 ORTHO05D004951 1.9e-137 493.0 376 69.9
Hund14402 Selenicereus undatus HOM05D004120 ORTHO05D004951 1.9e-137 493.0 378 73.0
Gorai.004G185700 Gossypium raimondii HOM05D004120 ORTHO05D004951 2.5e-137 492.7 394 69.0
vmacro00332 Vaccinium macrocarpon HOM05D004120 ORTHO05D004951 3.3e-137 492.3 431 64.0
Lalb_Chr05g0213941 Lupinus albus HOM05D004120 ORTHO05D004951 2.2e-136 489.6 374 70.1
Carub.0004s1696 Capsella rubella HOM05D004120 ORTHO05D004951 2.4e-135 486.1 377 68.2
AL4G31300 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 4.1e-135 485.3 371 69.5
Sabra01G0111800 Salix brachista HOM05D004120 ORTHO05D004951 5.3e-135 485.0 402 65.4
Sc01g0007480 Simmondsia chinensis HOM05D004120 ORTHO05D004951 6.9e-135 484.6 355 74.1
CDE03G0015 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 2.6e-134 482.6 330 75.5
Thhalv10016805m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 4.5e-134 481.9 378 68.0
PSO063G1634 Papaver somniferum HOM05D004120 ORTHO05D004951 7.7e-134 481.1 318 78.3
Sp4g17480 Schrenkiella parvula HOM05D004120 ORTHO05D004951 1.0e-133 480.7 380 68.4
BraA03t11203Z Brassica rapa HOM05D004120 ORTHO05D004951 1.7e-133 479.9 381 68.2
ATR0049G040 Amborella trichopoda HOM05D004120 ORTHO05D004951 2.2e-133 479.6 314 77.1
PSO782G3668 Papaver somniferum HOM05D004120 ORTHO05D004951 3.8e-133 478.8 315 78.4
A03p19500 Brassica napus HOM05D004120 ORTHO05D004951 5.0e-133 478.4 376 69.1
THA.LOC104807951 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 6.5e-133 478.0 347 72.3
Migut.E00930 Erythranthe guttata HOM05D004120 ORTHO05D004951 1.1e-132 477.2 384 68.2
C03p22720 Brassica napus HOM05D004120 ORTHO05D004951 4.2e-132 475.3 383 67.1
BcaC01g05734 Brassica carinata HOM05D004120 ORTHO05D004951 9.4e-132 474.2 378 68.5
AT2G35260 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 1.6e-131 473.4 379 67.3
BolC3t14671H Brassica oleracea HOM05D004120 ORTHO05D004951 6.1e-131 471.5 378 68.3
CARHR129420 Cardamine hirsuta HOM05D004120 ORTHO05D004951 6.1e-131 471.5 371 68.2
BcaC02g11630 Brassica carinata HOM05D004120 ORTHO05D004951 7.9e-131 471.1 377 67.6
C04p12920 Brassica napus HOM05D004120 ORTHO05D004951 7.9e-131 471.1 377 67.6
BolC4t22936H Brassica oleracea HOM05D004120 ORTHO05D004951 7.9e-131 471.1 378 68.0
Ah.12g054990 Amaranthus hybridus HOM05D004120 ORTHO05D004951 2.3e-130 469.5 374 69.3
AUR62007285 Chenopodium quinoa HOM05D004120 ORTHO05D004951 3.0e-130 469.2 370 69.5
BraA05t19989Z Brassica rapa HOM05D004120 ORTHO05D004951 3.9e-130 468.8 381 66.7
BcaB02g09465 Brassica carinata HOM05D004120 ORTHO05D004951 6.7e-130 468.0 384 66.4
Peaxi162Scf00045g00028 Petunia axillaris HOM05D004120 ORTHO05D004951 8.8e-130 467.6 368 68.5
unitig_52.g17209 Utricularia gibba HOM05D004120 ORTHO05D004951 2.0e-129 466.5 305 78.4
A05p10510 Brassica napus HOM05D004120 ORTHO05D004951 2.8e-128 462.6 375 67.2
unitig_699.g19781 Utricularia gibba HOM05D004120 ORTHO05D004951 8.2e-128 461.1 303 77.9
THA.LOC104798329 Tarenaya hassleriana HOM05D004120 ORTHO05D004951 9.1e-127 457.6 318 74.2
AL716U10010 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 7.7e-126 454.5 371 66.6
Psat2g173200 Pisum sativum HOM05D004120 ORTHO05D004951 2.2e-125 453.0 367 68.4
Thhalv10025287m.g Eutrema salsugineum HOM05D004120 ORTHO05D004951 3.8e-125 452.2 331 70.1
Aa31LG9G15290 Aethionema arabicum HOM05D004120 ORTHO05D004951 3.2e-124 449.1 417 61.2
Aa31LG6G560 Aethionema arabicum HOM05D004120 ORTHO05D004951 5.5e-124 448.4 365 64.9
HPP92_022140 Vanilla planifolia HOM05D004120 ORTHO05D004951 5.5e-124 448.4 312 73.4
HPP92_022143 Vanilla planifolia HOM05D004120 ORTHO05D004951 9.4e-124 447.6 317 73.8
Solyc08g005010.4 Solanum lycopersicum HOM05D004120 ORTHO05D004951 1.6e-123 446.8 327 72.2
Carub.0007s2352 Capsella rubella HOM05D004120 ORTHO05D004951 1.8e-122 443.4 300 73.0
Os03g0100030 Oryza sativa ssp. japonica HOM05D004120 ORTHO05D004951 1.8e-122 443.4 279 78.1
Zm00001eb426630 Zea mays HOM05D004120 ORTHO05D004951 2.3e-122 443.0 338 68.9
Glyma.01G198500 Glycine max HOM05D004120 ORTHO05D004951 3.9e-122 442.2 324 73.8
SGA_v2.0_scaffold54G19447 Striga asiatica HOM05D004120 ORTHO05D004951 6.7e-122 441.4 383 61.4
ECA246G0968 Erigeron canadensis HOM05D004120 ORTHO05D004951 1.5e-121 440.3 336 70.2
C07p49190 Brassica napus HOM05D004120 ORTHO05D004951 2.0e-121 439.9 355 66.5
BcaNung00052 Brassica carinata HOM05D004120 ORTHO05D004951 4.4e-121 438.7 275 78.5
CARHR224560 Cardamine hirsuta HOM05D004120 ORTHO05D004951 4.4e-121 438.7 351 66.1
Sp7g16270 Schrenkiella parvula HOM05D004120 ORTHO05D004951 1.7e-120 436.8 331 68.6
AL7G36690 Arabidopsis lyrata HOM05D004120 ORTHO05D004951 3.7e-120 435.6 351 66.4
AT4G17840 Arabidopsis thaliana HOM05D004120 ORTHO05D004951 1.1e-119 434.1 351 65.8
A03p50800 Brassica napus HOM05D004120 ORTHO05D004951 1.1e-119 434.1 281 76.2
BraA03t14169Z Brassica rapa HOM05D004120 ORTHO05D004951 1.1e-119 434.1 281 76.2
BcaC09g51598 Brassica carinata HOM05D004120 ORTHO05D004951 2.4e-119 433.0 386 61.7
BolC1t01127H Brassica oleracea HOM05D004120 ORTHO05D004951 2.4e-119 433.0 386 61.7
A01p09890 Brassica napus HOM05D004120 ORTHO05D004951 5.3e-119 431.8 363 63.9
BraA01t00933Z Brassica rapa HOM05D004120 ORTHO05D004951 5.3e-119 431.8 348 66.1
C01p11590 Brassica napus HOM05D004120 ORTHO05D004951 7.0e-119 431.4 348 66.1
MD06G1033000 Malus domestica HOM05D004120 ORTHO05D004951 2.0e-113 413.3 265 81.9
Atru.chr6.1717 Acer truncatum HOM05D004120 ORTHO05D004951 4.4e-113 412.1 309 72.2
FAN13G1981 Fragaria x ananassa HOM05D004120 ORTHO05D004951 3.5e-110 402.5 270 78.9
BolC7t45429H Brassica oleracea HOM05D004120 ORTHO05D004951 5.9e-110 401.7 324 67.3
FAN08G2335 Fragaria x ananassa HOM05D004120 ORTHO05D004951 3.8e-109 399.1 270 78.5
Haze_08240 Corylus avellana HOM05D004120 ORTHO05D004951 6.1e-107 391.7 333 67.9
SEGI_24472 Sequoiadendron giganteum HOM05D004120 ORTHO05D004951 1.8e-106 390.2 360 58.3
Duzib205G1837 Durio zibethinus HOM05D004120 ORTHO05D004951 6.8e-98 361.7 296 69.6
Nitab4.5_0000804g0170 Nicotiana tabacum HOM05D004120 ORTHO05D004951 2.6e-97 359.8 209 85.6
Actinidia28172 Actinidia chinensis HOM05D004120 ORTHO05D004951 1.7e-88 330.5 190 88.4
Pp3c10_10980 Physcomitrium patens HOM05D004120 ORTHO05D004951 5.9e-86 322.0 270 59.3
Mapoly0008s0099 Marchantia polymorpha HOM05D004120 ORTHO05D004951 1.3e-85 320.9 325 52.0
Actinidia25961 Actinidia chinensis HOM05D004120 ORTHO05D004951 2.5e-84 316.6 255 69.0
Pp3c14_25270 Physcomitrium patens HOM05D004120 ORTHO05D004951 2.5e-84 316.6 273 57.9
unitig_744.g24311 Utricularia gibba HOM05D004120 ORTHO05D004951 2.8e-83 313.2 256 66.0
Nitab4.5_0002539g0020 Nicotiana tabacum HOM05D004120 ORTHO05D004951 3.5e-78 296.2 275 62.9
SMO356G0344 Selaginella moellendorffii HOM05D004120 ORTHO05D004951 6.6e-69 265.4 252 52.4
CDE06G0385 Ceratophyllum demersum HOM05D004120 ORTHO05D004951 1.1e-66 258.1 232 59.5
HanXRQChr05g0153901 Helianthus annuus HOM05D004120 ORTHO05D004951 2.1e-59 233.8 162 77.8
arahy.Tifrunner.gnm1.ann1.K2V32T Arachis hypogaea HOM05D004120 ORTHO05D004951 6.8e-58 228.8 172 67.4
arahy.Tifrunner.gnm1.ann1.7CR4HZ Arachis hypogaea HOM05D004120 ORTHO05D004951 1.3e-56 224.6 179 65.4
arahy.Tifrunner.gnm1.ann1.WRTU1C Arachis hypogaea HOM05D004120 ORTHO05D004951 1.7e-56 224.2 172 66.9
arahy.Tifrunner.gnm1.ann1.3C7WBJ Arachis hypogaea HOM05D004120 ORTHO05D004951 2.7e-54 216.9 128 82.0
arahy.Tifrunner.gnm1.ann1.B3D4NA Arachis hypogaea HOM05D004120 ORTHO05D004951 3.5e-38 163.3 108 73.1
AagrBONN_evm.TU.Sc2ySwM_117.2801 Anthoceros agrestis HOM05D010715 ORTHO05D004951 4.6e-38 162.9 157 53.5
arahy.Tifrunner.gnm1.ann1.AE9Z3E Arachis hypogaea HOM05D004120 ORTHO05D004951 1.8e-37 161.0 109 71.6
arahy.Tifrunner.gnm1.ann1.4R7L3N Arachis hypogaea HOM05D004120 ORTHO05D004951 2.3e-37 160.6 96 79.2
arahy.Tifrunner.gnm1.ann1.RCE8PR Arachis hypogaea HOM05D004120 ORTHO05D004951 6.5e-32 142.5 131 58.8
Aa31sc618G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 9.3e-31 138.7 186 47.8
arahy.Tifrunner.gnm1.ann1.E125G1 Arachis hypogaea HOM05D004120 ORTHO05D004951 1.9e-28 131.0 70 85.7
arahy.Tifrunner.gnm1.ann1.BQ9W36 Arachis hypogaea HOM05D004120 ORTHO05D004951 1.3e-27 128.3 70 82.9
arahy.Tifrunner.gnm1.ann1.U1DJ88 Arachis hypogaea HOM05D004120 ORTHO05D007788 3.7e-27 126.7 73 82.2
RcHm_v2.0_Chr6g0284251 Rosa chinensis HOM05D004120 ORTHO05D004951 2.6e-25 120.6 72 79.2
CBR_g56906 Chara braunii HOM05D004120 ORTHO05D004951 1.3e-24 118.2 112 49.1
arahy.Tifrunner.gnm1.ann1.L0EJKI Arachis hypogaea HOM05D004120 ORTHO05D004951 6.5e-24 115.9 75 72.0
AagrBONN_evm.TU.Sc2ySwM_117.3803 Anthoceros agrestis HOM05D004120 ORTHO05D004951 1.2e-22 111.7 102 52.0
arahy.Tifrunner.gnm1.ann1.H82JQN Arachis hypogaea HOM05D004120 ORTHO05D021518 1.6e-22 111.3 88 61.4
EL10Ac1g01819 Beta vulgaris HOM05D004120 ORTHO05D023811 9.7e-20 102.1 69 78.3
CBR_g19263 Chara braunii HOM05D004120 ORTHO05D004951 2.8e-19 100.5 141 40.4
arahy.Tifrunner.gnm1.ann1.JI8VIY Arachis hypogaea HOM05D004120 ORTHO05D021518 1.2e-17 95.1 57 82.5
AUR62039713 Chenopodium quinoa HOM05D004317 ORTHO05D005031 1.7e-16 91.3 55 83.6
arahy.Tifrunner.gnm1.ann1.NR0HVE Arachis hypogaea HOM05D004120 ORTHO05D021518 6.5e-16 89.4 57 78.9
CAN.G36.13 Capsicum annuum HOM05D004120 ORTHO05D004951 1.4e-13 81.6 59 66.1
CAN.G399.4 Capsicum annuum HOM05D004120 ORTHO05D004951 2.5e-12 77.4 55 70.9
Aa31sc185G30 Aethionema arabicum HOM05D004120 ORTHO05D004951 7.7e-09 65.9 124 37.1
A01p32880 Brassica napus HOM05D004120 ORTHO05D023811 9.4e-07 58.9 28 96.4
A06p35780 Brassica napus HOM05D004120 ORTHO05D023811 9.4e-07 58.9 28 96.4
BraA01t03409Z Brassica rapa HOM05D004120 ORTHO05D023811 9.4e-07 58.9 28 96.4
BraA06t26504Z Brassica rapa HOM05D004120 ORTHO05D033838 7.9e-06 55.8 29 86.2


User provided reference genes

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