Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 1.5e-95 352.8 181 100.0
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 1.2e-60 236.9 168 75.6
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.7e-57 226.5 171 71.3
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.4e-56 223.4 171 70.2
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 9.4e-53 210.7 157 72.0
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 5.7e-42 174.9 173 59.5
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 1.7e-41 173.3 174 59.2
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 7.8e-39 164.5 173 57.2
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 1.2e-36 157.1 174 55.2
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 6.1e-36 154.8 155 60.6
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 6.1e-36 154.8 171 53.8
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 8.0e-36 154.5 155 60.0
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 3.1e-35 152.5 175 50.9
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 3.1e-35 152.5 175 50.9
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 8.9e-35 151.0 179 51.4
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 2.6e-34 149.4 148 60.8
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 2.9e-33 146.0 117 69.2
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 3.7e-33 145.6 162 50.0
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 4.9e-33 145.2 175 50.3
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 8.3e-33 144.4 175 52.0
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 1.1e-32 144.1 173 53.2
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 1.6e-31 140.2 175 52.0
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 1.1e-29 134.0 148 54.1
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.5e-29 133.7 148 53.4
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 1.5e-29 133.7 175 46.9
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 1.9e-29 133.3 176 47.2
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 3.3e-29 132.5 170 47.6
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 5.6e-29 131.7 168 46.4
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 9.5e-29 131.0 147 53.1
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 6.2e-28 128.3 170 48.2
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 3.1e-27 125.9 175 46.3
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 4.0e-27 125.6 171 46.8
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 3.4e-26 122.5 168 48.2
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 7.5e-26 121.3 168 47.0
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 9.8e-26 120.9 168 48.2
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.7e-25 120.2 174 44.8
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 1.7e-25 120.2 159 47.2
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 8.3e-25 117.9 169 42.0
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.4e-24 117.1 165 47.3
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 1.9e-24 116.7 155 47.7
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 3.2e-24 115.9 174 42.0
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 4.1e-24 115.5 170 44.7
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 1.2e-23 114.0 174 42.5
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 1.6e-23 113.6 155 47.1
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 1.6e-23 113.6 164 43.9
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.5e-23 112.5 129 50.4
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 4.6e-23 112.1 166 46.4
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.9e-22 109.0 173 43.9
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 1.1e-21 107.5 170 45.9
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 8.1e-20 101.3 179 43.0
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 4.4e-18 95.5 168 41.7
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 9.9e-18 94.4 155 43.2
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 2.4e-16 89.7 148 41.9
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 4.6e-15 85.5 159 41.5
Migut.E00933 Erythranthe guttata HOM05D008113 ORTHO05D009793 1.3e-14 84.0 169 39.6
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 1.3e-14 84.0 182 38.5
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 6.6e-14 81.6 167 37.7
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 4.3e-13 79.0 144 39.6
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 4.3e-13 79.0 177 35.6
CARHR032060 Cardamine hirsuta HOM05D012772 ORTHO05D009793 3.6e-12 75.9 85 45.9
AUR62007292 Chenopodium quinoa HOM05D008113 ORTHO05D009793 3.6e-12 75.9 116 43.1
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 1.8e-11 73.6 142 39.4
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 4.0e-11 72.4 133 40.6
Lalb_Chr16g0381371 Lupinus albus HOM05D008113 ORTHO05D009793 3.4e-10 69.3 167 35.3
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 5.8e-10 68.6 172 36.6
unitig_22.g5500 Utricularia gibba HOM05D008113 ORTHO05D009793 7.6e-10 68.2 166 38.0
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 4.9e-09 65.5 162 35.2
Sp1g28300 Schrenkiella parvula HOM05D012772 ORTHO05D009793 8.4e-09 64.7 112 40.2
Carub.0001s3101 Capsella rubella HOM05D012772 ORTHO05D009793 3.2e-08 62.8 164 31.1
Thhalv10009063m.g Eutrema salsugineum HOM05D012772 ORTHO05D009793 5.4e-08 62.0 182 33.0
HPP92_014861 Vanilla planifolia HOM05D008113 ORTHO05D009793 3.5e-07 59.3 179 31.8
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 1.0e-06 57.8 205 30.7
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 5.1e-06 55.5 213 29.1


User provided reference genes

Program Settings