Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G034700 Prunus persica HOM05D009512 ORTHO05D010730 7.3e-57 223.8 122 100.0
MD12G1166300 Malus domestica HOM05D009512 ORTHO05D010730 5.8e-38 161.0 127 66.1
RcHm_v2.0_Chr7g0232991 Rosa chinensis HOM05D009512 ORTHO05D010730 6.2e-24 114.4 122 60.7
CANSAT25G1369 Cannabis sativa HOM05D009512 ORTHO05D010730 9.0e-23 110.5 103 66.0
FAN23G1413 Fragaria x ananassa HOM05D009512 ORTHO05D010730 1.2e-22 110.2 122 59.8
Manes.03G073600 Manihot esculenta HOM05D009512 ORTHO05D010730 2.9e-21 105.5 118 46.6
Glyma.01G018000 Glycine max HOM05D009512 ORTHO05D010730 3.5e-19 98.6 130 40.8
Glyma.09G205000 Glycine max HOM05D009512 ORTHO05D010730 2.3e-18 95.9 131 40.5
Phvul.002G141000 Phaseolus vulgaris HOM05D009512 ORTHO05D010730 6.6e-18 94.4 117 41.9
Sed0026474 Sechium edule HOM05D009512 ORTHO05D010730 5.6e-17 91.3 125 42.4
ClCG10G001530 Citrullus lanatus HOM05D009512 ORTHO05D010730 3.6e-16 88.6 120 40.0
QL12p005029 Quercus lobata HOM05D009512 ORTHO05D010730 8.1e-16 87.4 115 48.7
Aqoxy1G03922 Aquilegia oxysepala HOM05D009512 ORTHO05D010730 9.0e-15 84.0 94 54.3
Psat2g136400 Pisum sativum HOM05D009512 ORTHO05D010730 3.4e-14 82.0 97 40.2
AUR62017995 Chenopodium quinoa HOM05D011998 ORTHO05D010730 2.2e-13 79.3 102 40.2
ECA240G2432 Erigeron canadensis HOM05D011998 ORTHO05D010730 1.4e-12 76.6 106 38.7
Hund14078 Selenicereus undatus HOM05D011998 ORTHO05D010730 1.9e-12 76.3 103 39.8
Sc03g0000480 Simmondsia chinensis HOM05D011998 ORTHO05D010730 3.2e-12 75.5 94 35.1
Ah.03g143310 Amaranthus hybridus HOM05D011998 ORTHO05D010730 4.6e-11 71.6 119 34.5
AUR62017997 Chenopodium quinoa HOM05D011998 ORTHO05D010730 7.9e-11 70.9 102 36.3
FAN19G2100 Fragaria x ananassa HOM05D009512 ORTHO05D013879 1.0e-10 70.5 59 55.9
arahy.Tifrunner.gnm1.ann1.JQZ01T Arachis hypogaea HOM05D009512 ORTHO05D010730 1.3e-10 70.1 127 34.6
arahy.Tifrunner.gnm1.ann1.KKPN0I Arachis hypogaea HOM05D009512 ORTHO05D010730 1.3e-10 70.1 127 34.6
Ca_06084_v3 Cicer arietinum L. HOM05D009512 ORTHO05D010730 2.3e-10 69.3 127 40.2
FAN26G2196 Fragaria x ananassa HOM05D000564 ORTHO05D005239 3.0e-10 68.9 51 60.8
AUR62003685 Chenopodium quinoa HOM05D011998 ORTHO05D010730 6.7e-10 67.8 100 33.0
AUR62003683 Chenopodium quinoa HOM05D011998 ORTHO05D010730 2.8e-08 62.4 94 35.1
GSVIVG01013151001 Vitis vinifera HOM05D009512 ORTHO05D010730 2.8e-08 62.4 99 37.4
EL10Ac6g15177 Beta vulgaris HOM05D011998 ORTHO05D010730 3.7e-08 62.0 43 60.5
Lsat_1_v5_gn_6_79881 Lactuca sativa HOM05D000379 ORTHO05D000254 8.1e-08 60.8 94 38.3
Sc03g0000470 Simmondsia chinensis HOM05D011998 ORTHO05D010730 8.1e-08 60.8 98 32.7
Sc03g0000460 Simmondsia chinensis HOM05D011998 ORTHO05D010730 2.4e-07 59.3 98 31.6
TPR.G1037 Trifolium pratense HOM05D009512 ORTHO05D010730 3.1e-07 58.9 120 33.3
Nn5g27093 Nelumbo nucifera HOM05D009512 ORTHO05D010730 5.3e-07 58.2 101 32.7
Lsat_1_v5_gn_6_79821 Lactuca sativa HOM05D009512 ORTHO05D010730 9.0e-07 57.4 81 34.6
Lj2g0024897 Lotus japonicus HOM05D009512 ORTHO05D010730 9.0e-07 57.4 116 32.8
Peaxi162Scf00236g00005 Petunia axillaris HOM05D020900 ORTHO05D010730 1.2e-06 57.0 120 26.7
Medtr5g030310 Medicago truncatula HOM05D009512 ORTHO05D010730 1.5e-06 56.6 41 51.2
AUR62017994 Chenopodium quinoa HOM05D011998 ORTHO05D010730 3.4e-06 55.5 94 33.0
Medtr5g430440 Medicago truncatula HOM05D009512 ORTHO05D010730 4.5e-06 55.1 41 51.2
Medtr5g030290 Medicago truncatula HOM05D009512 ORTHO05D010730 5.8e-06 54.7 120 38.3
Medtr5g430430 Medicago truncatula HOM05D009512 ORTHO05D010730 5.8e-06 54.7 120 38.3
Nitab4.5_0001397g0010 Nicotiana tabacum HOM05D020900 ORTHO05D010730 5.8e-06 54.7 120 26.7
HanXRQChr17g0556981 Helianthus annuus HOM05D009512 ORTHO05D010730 7.6e-06 54.3 35 60.0


User provided reference genes

Program Settings