Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G026400 Prunus persica HOM05D000003 ORTHO05D000006 1.8e-116 422.5 207 100.0
Atru.chr1.1904 Acer truncatum HOM05D000003 ORTHO05D000004 6.0e-11 72.0 55 50.9
Atru.chr10.629 Acer truncatum HOM05D000003 ORTHO05D000004 8.7e-10 68.2 55 50.9
Atru.chr10.1301 Acer truncatum HOM05D000003 ORTHO05D000006 1.1e-09 67.8 55 49.1
Atru.chr4.30 Acer truncatum HOM05D000003 ORTHO05D000004 1.1e-09 67.8 55 50.9
FvH4_5g27994 Fragaria vesca HOM05D000003 ORTHO05D000004 1.1e-09 67.8 58 44.8
Atru.chr2.1761 Acer truncatum HOM05D000003 ORTHO05D000004 1.9e-09 67.0 55 49.1
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-09 65.5 52 42.3
Sabra08G0134900 Salix brachista HOM05D000003 ORTHO05D000006 5.6e-09 65.5 89 34.8
FvH4_1g29781 Fragaria vesca HOM05D010299 ORTHO05D019146 7.3e-09 65.1 58 46.6
Atru.chr10.81 Acer truncatum HOM05D000003 ORTHO05D000004 9.6e-09 64.7 52 50.0
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 9.6e-09 64.7 55 43.6
Atru.chr1.1302 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-08 64.3 52 46.2
Atru.chr2.451 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-08 64.3 52 46.2
RcHm_v2.0_Chr1g0351011 Rosa chinensis HOM05D000003 ORTHO05D000004 1.2e-08 64.3 223 25.6
Sabra04G0049100 Salix brachista HOM05D000003 ORTHO05D000007 1.2e-08 64.3 89 34.8
Sabra15G0091800 Salix brachista HOM05D000003 ORTHO05D000007 1.2e-08 64.3 89 34.8
Sabra09G0015300 Salix brachista HOM05D000003 ORTHO05D000006 1.6e-08 63.9 89 34.8
Duzib187G0609 Durio zibethinus HOM05D000003 ORTHO05D000004 2.1e-08 63.5 73 37.0
Atru.chr3.1522 Acer truncatum HOM05D000003 ORTHO05D000006 3.6e-08 62.8 55 41.8
Atru.chr7.714 Acer truncatum HOM05D000003 ORTHO05D000006 3.6e-08 62.8 55 41.8
QL04p038160 Quercus lobata HOM05D000003 ORTHO05D000007 3.6e-08 62.8 53 49.1
Atru.chr5.3511 Acer truncatum HOM05D000003 ORTHO05D000006 4.7e-08 62.4 55 47.3
Atru.chr13.1144 Acer truncatum HOM05D000003 ORTHO05D000006 8.1e-08 61.6 52 44.2
Atru.chr2.1277 Acer truncatum HOM05D000003 ORTHO05D000006 1.1e-07 61.2 55 43.6
Atru.chr6.1170 Acer truncatum HOM05D000003 ORTHO05D000022 1.1e-07 61.2 55 41.8
PGR031G0879 Punica granatum HOM05D000003 ORTHO05D000006 1.1e-07 61.2 89 36.0
Atru.chr7.622 Acer truncatum HOM05D000003 ORTHO05D000004 1.4e-07 60.8 52 44.2
Duzib192G0668 Durio zibethinus HOM05D000003 ORTHO05D000006 1.4e-07 60.8 76 38.2
TPR.G21254 Trifolium pratense HOM05D000003 ORTHO05D000006 1.8e-07 60.5 76 36.8
Atru.chr13.2319 Acer truncatum HOM05D000003 ORTHO05D000006 3.1e-07 59.7 49 44.9
Atru.chr4.104 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-07 59.7 55 45.5
Duzib147G1683 Durio zibethinus HOM05D000003 ORTHO05D000006 3.1e-07 59.7 61 37.7
CiPaw.06G011600 Carya illinoinensis HOM05D000003 ORTHO05D000006 4.0e-07 59.3 64 42.2
Atru.chr1.776 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-07 58.9 55 41.8
TPR.G28475 Trifolium pratense HOM05D000003 ORTHO05D000006 5.3e-07 58.9 68 36.8
COL.COLO4_05807 Corchorus olitorius HOM05D000003 ORTHO05D000006 6.9e-07 58.5 59 45.8
Dinv13162 Davidia involucrata HOM05D000003 ORTHO05D000006 6.9e-07 58.5 49 46.9
PSO063G7018 Papaver somniferum HOM05D000003 ORTHO05D000006 6.9e-07 58.5 57 47.4
PSO801G0372 Papaver somniferum HOM05D000003 ORTHO05D000006 6.9e-07 58.5 57 40.4
QL01p027762 Quercus lobata HOM05D000003 ORTHO05D000006 6.9e-07 58.5 48 45.8
QL01p027824 Quercus lobata HOM05D000003 ORTHO05D000006 6.9e-07 58.5 48 45.8
RcHm_v2.0_Chr5g0053531 Rosa chinensis HOM05D000003 ORTHO05D000004 6.9e-07 58.5 49 40.8
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 9.0e-07 58.2 55 38.2
Rhsim02G0134700 Rhododendron simsii HOM05D000003 ORTHO05D000006 9.0e-07 58.2 48 41.7
PSO384G2824 Papaver somniferum HOM05D000003 ORTHO05D000004 1.2e-06 57.8 51 47.1
TPR.G22601 Trifolium pratense HOM05D000003 ORTHO05D000006 1.2e-06 57.8 53 45.3
Atru.chr4.1865 Acer truncatum HOM05D000003 ORTHO05D000006 1.5e-06 57.4 96 29.2
Atru.chr9.1348 Acer truncatum HOM05D000003 ORTHO05D000006 1.5e-06 57.4 55 40.0
PSO017G0212 Papaver somniferum HOM05D000003 ORTHO05D000004 1.5e-06 57.4 60 45.0
QL11p054864 Quercus lobata HOM05D000003 ORTHO05D000007 1.5e-06 57.4 52 40.4
Thecc.05G092600 Theobroma cacao HOM05D000024 ORTHO05D000006 1.5e-06 57.4 51 49.0
FvH4_2g11954 Fragaria vesca HOM05D000003 ORTHO05D000006 2.6e-06 56.6 102 28.4
QL03p012384 Quercus lobata HOM05D000003 ORTHO05D000006 2.6e-06 56.6 48 43.8
RcHm_v2.0_Chr2g0160431 Rosa chinensis HOM05D000003 ORTHO05D000004 2.6e-06 56.6 99 31.3
Thecc.06G023800 Theobroma cacao HOM05D000003 ORTHO05D000006 3.4e-06 56.2 51 45.1
Aa31LG5G21260 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.4e-06 55.8 64 42.2
CANSAT21G1068 Cannabis sativa HOM05D000003 ORTHO05D000006 4.4e-06 55.8 57 40.4
PSO017G2808 Papaver somniferum HOM05D000003 ORTHO05D000004 4.4e-06 55.8 65 36.9
Rhsim03G0080700 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.4e-06 55.8 48 43.8
Rhsim04G0242400 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.4e-06 55.8 48 43.8
Rhsim05G0162800 Rhododendron simsii HOM05D001637 ORTHO05D000006 4.4e-06 55.8 48 43.8
TPR.G14759 Trifolium pratense HOM05D000003 ORTHO05D000006 4.4e-06 55.8 53 43.4
FvH4_2g12222 Fragaria vesca HOM05D000003 ORTHO05D000006 5.8e-06 55.5 58 37.9
MBI11_g07623_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 5.8e-06 55.5 64 39.1
PSO339G0236 Papaver somniferum HOM05D000003 ORTHO05D000004 5.8e-06 55.5 57 45.6
Rhsim02G0238600 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.8e-06 55.5 52 42.3
Rhsim11G0006400 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.8e-06 55.5 48 39.6
FvH4_2g12002 Fragaria vesca HOM05D000003 ORTHO05D000006 7.6e-06 55.1 67 32.8
PSO017G1390 Papaver somniferum HOM05D000003 ORTHO05D000006 7.6e-06 55.1 65 46.2
Rhsim12G0079800 Rhododendron simsii HOM05D000003 ORTHO05D000006 7.6e-06 55.1 51 45.1
RcHm_v2.0_Chr1g0342601 Rosa chinensis HOM05D000003 ORTHO05D000006 7.6e-06 55.1 49 36.7
TAR536G0010 Trochodendron aralioides HOM05D000003 ORTHO05D000006 7.6e-06 55.1 73 34.2
PSO339G0747 Papaver somniferum HOM05D000003 ORTHO05D000006 9.9e-06 54.7 64 34.4


User provided reference genes

Program Settings