Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 3.8e-88 328.2 170 100.0
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 1.5e-60 236.5 170 78.2
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.3e-47 192.2 169 68.0
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.3e-47 191.8 168 67.9
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.3e-47 191.8 169 68.0
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 2.3e-45 186.0 169 67.5
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.3e-45 186.0 169 67.5
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 2.0e-44 183.0 174 64.9
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.4e-44 181.8 169 65.7
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 2.2e-43 179.5 170 62.4
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 1.9e-42 176.4 168 64.3
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 2.4e-42 176.0 171 64.3
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 7.0e-42 174.5 173 61.8
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 7.0e-42 174.5 175 65.7
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 9.2e-42 174.1 172 63.4
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 1.6e-41 173.3 168 62.5
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 2.7e-41 172.6 174 62.1
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 3.0e-40 169.1 169 60.9
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 3.0e-40 169.1 169 67.5
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 3.9e-40 168.7 171 60.2
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 6.6e-40 167.9 171 61.4
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 1.9e-39 166.4 170 60.0
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 2.1e-38 162.9 173 56.6
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.3e-37 159.5 172 58.1
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.3e-37 159.5 172 58.1
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 2.3e-37 159.5 166 59.6
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 3.1e-37 159.1 171 57.9
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 4.0e-37 158.7 170 59.4
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 2.0e-36 156.4 170 57.1
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 2.0e-36 156.4 166 59.0
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 2.6e-36 156.0 170 60.0
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 5.8e-36 154.8 173 59.5
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 5.8e-36 154.8 181 53.6
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 9.8e-36 154.1 177 52.0
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 9.8e-36 154.1 171 57.9
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 2.9e-35 152.5 174 53.4
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 1.1e-34 150.6 174 52.9
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 1.1e-34 150.6 177 53.7
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 1.4e-34 150.2 214 49.1
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.9e-34 149.8 178 55.6
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 1.9e-34 149.8 177 53.1
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 3.2e-34 149.1 177 53.7
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 4.1e-34 148.7 178 52.8
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 9.2e-34 147.5 184 51.6
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 9.2e-34 147.5 185 53.0
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 9.2e-34 147.5 143 62.9
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 1.2e-33 147.1 174 53.4
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.2e-33 147.1 175 52.6
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 1.2e-33 147.1 174 53.4
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.2e-33 147.1 175 52.6
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 2.1e-33 146.4 172 51.7
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 2.7e-33 146.0 172 51.7
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 2.7e-33 146.0 172 51.7
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 4.6e-33 145.2 184 53.8
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 4.6e-33 145.2 165 57.6
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 4.6e-33 145.2 174 52.9
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 4.6e-33 145.2 175 52.0
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 6.0e-33 144.8 174 54.0
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 6.0e-33 144.8 181 55.8
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 2.3e-32 142.9 175 52.0
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 2.3e-32 142.9 186 51.1
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 3.0e-32 142.5 168 54.8
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 3.0e-32 142.5 139 60.4
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 5.1e-32 141.7 138 64.5
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 6.6e-32 141.4 179 49.2
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 6.6e-32 141.4 176 53.4
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 1.5e-31 140.2 176 51.7
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 1.6e-30 136.7 167 55.7
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.6e-30 136.7 200 50.0
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 2.8e-30 136.0 173 49.1
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 2.8e-30 136.0 178 48.9
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 3.6e-30 135.6 178 49.4
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 3.6e-30 135.6 175 51.4
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 4.7e-30 135.2 138 57.2
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 4.7e-30 135.2 180 51.1
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 4.7e-30 135.2 173 52.6
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 4.7e-30 135.2 173 49.1
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 6.2e-30 134.8 168 51.2
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 6.2e-30 134.8 168 51.2
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 6.2e-30 134.8 166 56.6
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.1e-29 134.0 144 60.4
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.8e-29 133.3 168 51.8
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 2.3e-29 132.9 169 52.7
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 2.3e-29 132.9 169 50.9
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 3.1e-29 132.5 172 50.6
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 8.9e-29 131.0 95 72.6
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 5.8e-28 128.3 171 49.7
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 5.8e-28 128.3 176 52.3
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 9.9e-28 127.5 175 49.1
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 2.2e-27 126.3 166 51.2
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 2.9e-27 125.9 176 50.0
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 4.9e-27 125.2 178 46.6
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 2.4e-26 122.9 174 49.4
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 9.2e-26 120.9 91 71.4
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 1.2e-25 120.6 144 53.5
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 4.6e-25 118.6 91 70.3
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 6.0e-25 118.2 108 60.2
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 4.3e-23 112.1 104 61.5
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 5.6e-23 111.7 63 88.9
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 4.7e-22 108.6 147 49.7
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 3.1e-21 105.9 252 36.9
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 4.9e-19 98.6 151 50.3
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 4.9e-19 98.6 162 46.3
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 1.2e-17 94.0 85 65.9
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.3e-16 90.5 148 45.9
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.3e-16 90.5 55 81.8
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 4.3e-15 85.5 79 59.5
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 4.3e-15 85.5 142 41.5
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 2.8e-14 82.8 188 38.8
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 4.8e-14 82.0 109 46.8
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 1.8e-13 80.1 70 60.0
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 3.1e-13 79.3 135 44.4
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 4.5e-12 75.5 45 82.2
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 1.3e-11 73.9 80 53.8
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 1.9e-10 70.1 76 51.3


User provided reference genes

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