Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 1.4e-80 303.1 176 100.0
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 6.6e-59 231.1 176 79.0
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 8.0e-49 197.6 174 72.4
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 2.6e-47 192.6 174 70.1
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.6e-47 192.6 174 70.1
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.6e-47 192.6 174 70.1
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 7.5e-47 191.0 173 69.9
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 2.2e-46 189.5 168 66.1
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 8.3e-46 187.6 165 68.5
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 1.2e-44 183.7 168 63.7
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 3.0e-43 179.1 163 68.7
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 5.0e-43 178.3 166 65.1
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 2.5e-42 176.0 172 62.8
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 4.3e-42 175.3 172 62.2
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 4.7e-41 171.8 169 65.1
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 4.0e-40 168.7 172 64.0
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.5e-39 166.8 174 59.8
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 5.8e-39 164.9 172 62.8
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 2.2e-38 162.9 174 60.9
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 2.9e-38 162.5 172 63.4
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.2e-36 157.1 173 61.8
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 2.7e-36 156.0 176 56.2
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 3.5e-36 155.6 168 63.1
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 1.5e-34 150.2 172 57.6
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 2.1e-33 146.4 172 51.7
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 2.8e-33 146.0 172 55.2
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 3.6e-33 145.6 167 60.5
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 4.7e-33 145.2 167 60.5
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 6.2e-33 144.8 172 56.4
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.1e-32 144.1 172 54.1
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 1.8e-32 143.3 174 57.5
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 1.8e-32 143.3 174 48.9
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 4.0e-32 142.1 173 59.5
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 4.0e-32 142.1 166 56.6
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 6.8e-32 141.4 166 53.0
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 3.4e-31 139.0 174 56.3
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 5.8e-31 138.3 168 54.8
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 2.2e-30 136.3 176 51.7
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 2.9e-30 136.0 172 55.2
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 6.4e-30 134.8 168 54.8
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 6.4e-30 134.8 143 61.5
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 8.4e-30 134.4 172 53.5
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 1.1e-29 134.0 166 53.6
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 1.4e-29 133.7 175 58.3
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 1.9e-29 133.3 174 54.0
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 3.2e-29 132.5 142 59.9
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 3.2e-29 132.5 176 50.6
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 4.1e-29 132.1 169 52.7
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 5.4e-29 131.7 168 59.5
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 7.1e-29 131.3 173 50.3
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 9.2e-29 131.0 176 51.1
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 1.6e-28 130.2 142 59.9
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 2.1e-28 129.8 148 59.5
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 2.7e-28 129.4 143 60.1
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 6.0e-28 128.3 143 60.1
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 1.0e-27 127.5 168 53.6
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 1.3e-27 127.1 170 52.9
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 3.0e-27 125.9 133 62.4
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 3.9e-27 125.6 168 52.4
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 3.9e-27 125.6 143 59.4
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 6.6e-27 124.8 143 58.7
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 8.7e-27 124.4 143 58.0
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 8.7e-27 124.4 167 53.9
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 1.5e-26 123.6 142 57.0
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 2.5e-26 122.9 172 50.6
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 3.3e-26 122.5 168 51.8
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 3.3e-26 122.5 166 51.8
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 3.3e-26 122.5 142 56.3
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 7.3e-26 121.3 176 48.9
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.2e-25 120.6 156 53.8
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 2.1e-25 119.8 144 58.3
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 2.1e-25 119.8 165 56.4
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 2.8e-25 119.4 170 51.8
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 3.6e-25 119.0 142 57.0
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 1.8e-24 116.7 175 52.0
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.8e-24 116.7 174 53.4
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 3.1e-24 115.9 167 51.5
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 6.9e-24 114.8 150 60.0
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 9.0e-24 114.4 150 58.0
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 2.0e-23 113.2 172 48.3
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 2.0e-23 113.2 165 53.3
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 5.8e-23 111.7 154 53.2
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 9.9e-23 110.9 110 70.9
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 1.7e-22 110.2 166 47.6
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 1.9e-21 106.7 166 49.4
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 4.2e-21 105.5 172 48.8
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.2e-20 104.0 172 48.3
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 1.2e-20 104.0 172 48.3
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 3.0e-19 99.4 160 51.2
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 1.1e-18 97.4 164 50.0
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 1.5e-18 97.1 172 47.1
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 4.3e-18 95.5 114 59.6
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 2.1e-17 93.2 191 45.0
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 1.1e-16 90.9 78 74.4
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 2.4e-16 89.7 173 43.4
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 2.0e-15 86.7 113 57.5
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 7.6e-15 84.7 80 81.2
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 9.9e-15 84.3 112 50.0
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.3e-14 84.0 160 48.8
COL.COLO4_11248 Corchorus olitorius HOM05D007523 ORTHO05D009520 4.2e-13 79.0 130 44.6
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 7.9e-12 74.7 88 60.2
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.3e-11 73.9 171 37.4
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 1.3e-11 73.9 78 73.1


User provided reference genes

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