Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 2.4e-83 312.8 247 100.0
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 9.9e-53 211.1 250 81.2
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.9e-49 199.1 235 82.6
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 1.1e-48 197.6 252 78.2
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.3e-48 196.1 252 77.8
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.6e-47 193.7 235 81.3
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 4.7e-47 192.2 235 81.7
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 4.9e-44 182.2 248 75.4
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 7.1e-43 178.3 232 74.6
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 2.3e-41 173.3 249 73.1
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 3.9e-41 172.6 232 74.1
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 1.5e-40 170.6 233 73.0
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 3.3e-40 169.5 251 70.5
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 5.6e-40 168.7 247 70.4
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 1.3e-39 167.5 260 70.4
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 1.3e-39 167.5 234 73.5
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 2.1e-39 166.8 268 69.0
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 2.4e-38 163.3 250 69.2
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.5e-37 160.6 251 68.9
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 9.9e-37 157.9 251 68.9
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 4.9e-36 155.6 237 70.0
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 8.4e-36 154.8 247 66.4
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 1.4e-35 154.1 251 67.3
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 3.2e-35 152.9 243 67.5
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 7.1e-35 151.8 250 68.4
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 7.1e-35 151.8 256 70.3
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 9.3e-35 151.4 250 66.8
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 1.6e-34 150.6 234 70.5
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 7.9e-34 148.3 250 70.0
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 1.0e-33 147.9 257 53.7
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 2.3e-33 146.7 252 69.0
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.9e-33 146.0 201 83.1
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.9e-33 146.0 250 66.4
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 6.6e-33 145.2 251 65.3
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 8.7e-33 144.8 242 69.4
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 2.5e-32 143.3 242 70.2
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 7.3e-32 141.7 253 66.4
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 1.6e-31 140.6 258 65.1
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 2.8e-31 139.8 249 65.1
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 3.6e-31 139.4 247 64.0
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 1.1e-30 137.9 239 69.9
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 1.8e-30 137.1 251 68.5
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 5.3e-30 135.6 254 66.5
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 5.3e-30 135.6 239 66.9
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 6.9e-30 135.2 240 65.8
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 2.6e-29 133.3 249 65.5
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 4.5e-29 132.5 249 67.1
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 5.8e-29 132.1 240 65.8
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 7.6e-29 131.7 240 66.2
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 9.9e-29 131.3 239 66.1
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 9.9e-29 131.3 234 67.5
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 1.3e-28 131.0 236 68.2
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 1.3e-28 131.0 249 63.1
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.7e-28 130.6 234 67.1
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 2.2e-28 130.2 241 64.7
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 2.9e-28 129.8 237 63.3
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 3.8e-28 129.4 269 62.8
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 4.9e-28 129.0 250 64.4
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 4.9e-28 129.0 250 64.4
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 6.4e-28 128.6 241 63.9
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 8.4e-28 128.3 253 65.2
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 8.4e-28 128.3 253 65.2
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 8.4e-28 128.3 252 63.1
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 1.1e-27 127.9 240 65.4
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.1e-27 127.9 234 66.2
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 1.4e-27 127.5 303 56.1
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 5.5e-27 125.6 185 77.8
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 9.3e-27 124.8 236 64.4
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 2.7e-26 123.2 242 64.9
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 4.6e-26 122.5 247 52.6
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 1.8e-25 120.6 250 61.2
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 1.8e-25 120.6 261 63.6
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 2.3e-25 120.2 172 81.4
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 3.9e-25 119.4 239 64.0
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 5.1e-25 119.0 265 59.6
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 5.1e-25 119.0 265 59.6
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 1.5e-24 117.5 77 71.4
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 2.5e-24 116.7 79 73.4
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 2.5e-24 116.7 71 77.5
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 7.4e-24 115.2 196 70.4
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 9.6e-24 114.8 257 62.3
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 2.1e-23 113.6 249 60.6
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 2.8e-23 113.2 267 60.3
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.4e-22 110.2 187 56.7
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 6.9e-22 108.6 68 75.0
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 6.9e-22 108.6 233 64.8
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 9.0e-22 108.2 235 63.4
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 9.0e-22 108.2 254 61.4
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 1.2e-21 107.8 210 70.0
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 1.0e-20 104.8 240 62.1
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 1.0e-20 104.8 246 61.8
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 1.3e-20 104.4 294 54.4
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 1.3e-20 104.4 202 72.3
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 1.7e-20 104.0 199 70.4
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 3.2e-19 99.8 234 61.5
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 5.5e-19 99.0 243 57.6
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 5.5e-19 99.0 380 44.7
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 2.7e-18 96.7 71 67.6
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 4.6e-18 95.9 80 57.5
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 3.9e-17 92.8 290 55.2
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 1.9e-16 90.5 78 60.3
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 2.5e-16 90.1 68 61.8
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 1.3e-15 87.8 70 64.3
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 9.0e-14 81.6 265 56.6
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 1.2e-13 81.3 187 48.1
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.2e-13 81.3 217 60.8
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 2.0e-13 80.5 270 54.8
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 5.0e-12 75.9 102 50.0
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 5.0e-12 75.9 265 55.5
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 6.5e-12 75.5 227 61.7
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.9e-11 73.9 202 30.7
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 7.2e-11 72.0 51 58.8
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 9.3e-11 71.6 197 47.2
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 1.9e-08 63.9 44 63.6
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.1e-06 58.2 33 72.7


User provided reference genes

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