Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 2.0e-50 202.2 108 100.0
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 2.9e-41 171.8 103 92.2
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 5.3e-35 151.0 103 79.6
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 1.2e-34 149.8 103 80.6
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 1.8e-30 136.0 103 74.8
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 3.9e-30 134.8 103 73.8
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 1.1e-29 133.3 103 73.8
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 4.3e-29 131.3 103 72.8
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 8.2e-28 127.1 103 71.8
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 1.1e-27 126.7 104 72.1
FAN07G2443 Fragaria x ananassa HOM05D007293 ORTHO05D009143 3.2e-24 115.2 89 76.4
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 6.1e-23 110.9 104 63.5
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 3.9e-22 108.2 98 65.3
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 2.0e-21 105.9 105 60.0
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 3.3e-21 105.1 103 61.2
Manes.13G030700 Manihot esculenta HOM05D007293 ORTHO05D009143 2.2e-20 102.4 111 58.6
CiPaw.05G150900 Carya illinoinensis HOM05D007293 ORTHO05D009143 2.8e-20 102.1 104 64.4
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 6.3e-20 100.9 103 60.2
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 6.3e-20 100.9 107 57.9
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 8.2e-20 100.5 104 61.5
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 1.1e-19 100.1 104 62.5
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 1.4e-19 99.8 103 59.2
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 3.1e-19 98.6 106 61.3
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 1.5e-18 96.3 98 58.2
Gohir.D02G162700 Gossypium hirsutum HOM05D007293 ORTHO05D009143 1.5e-18 96.3 103 58.3
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 2.0e-18 95.9 104 56.7
Gorai.005G182700 Gossypium raimondii HOM05D007293 ORTHO05D009143 3.4e-18 95.1 103 57.3
Gohir.A03G139900 Gossypium hirsutum HOM05D007293 ORTHO05D009143 1.3e-17 93.2 103 56.3
Lj2g0011400 Lotus japonicus HOM05D007293 ORTHO05D009143 5.0e-17 91.3 106 55.7
QL03p061237 Quercus lobata HOM05D007293 ORTHO05D009143 6.5e-17 90.9 110 58.2
Lalb_Chr09g0326381 Lupinus albus HOM05D007293 ORTHO05D009143 1.1e-16 90.1 106 54.7
CsaV3_4G037870 Cucumis sativus L. HOM05D001719 ORTHO05D008883 4.2e-16 88.2 110 51.8
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 9.4e-16 87.0 101 59.4
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 1.6e-15 86.3 99 54.5
Ca_13998_v3 Cicer arietinum L. HOM05D007293 ORTHO05D009143 4.7e-15 84.7 99 54.5
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 4.7e-15 84.7 103 51.5
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 8.0e-15 84.0 104 53.8
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 1.0e-14 83.6 112 50.0
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 1.0e-14 83.6 99 52.5
TPR.G13591 Trifolium pratense HOM05D007293 ORTHO05D009143 1.4e-14 83.2 104 52.9
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 2.3e-14 82.4 99 53.5
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 8.8e-14 80.5 99 55.6
arahy.Tifrunner.gnm1.ann1.F37JRW Arachis hypogaea HOM05D007293 ORTHO05D009143 3.3e-13 78.6 104 54.8
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 3.3e-13 78.6 100 55.0
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 3.3e-13 78.6 98 51.0
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 3.3e-13 78.6 98 51.0
Glyma.02G034600 Glycine max HOM05D007293 ORTHO05D009143 4.4e-13 78.2 104 51.0
Medtr5g034340 Medicago truncatula HOM05D007293 ORTHO05D009143 4.4e-13 78.2 104 51.0
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 7.4e-13 77.4 99 50.5
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 7.4e-13 77.4 103 50.5
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 9.7e-13 77.0 98 51.0
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 9.7e-13 77.0 99 51.5
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 1.3e-12 76.6 112 49.1
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 1.7e-12 76.3 99 51.5
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 2.8e-12 75.5 113 49.6
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 4.8e-12 74.7 109 52.3
arahy.Tifrunner.gnm1.ann1.HDCN36 Arachis hypogaea HOM05D007293 ORTHO05D009143 6.3e-12 74.3 103 51.5
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 6.3e-12 74.3 102 52.0
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 6.3e-12 74.3 101 49.5
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 1.4e-11 73.2 99 48.5
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 2.4e-11 72.4 100 49.0
TPR.G13583 Trifolium pratense HOM05D007293 ORTHO05D009143 3.1e-11 72.0 108 47.2
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 2.0e-10 69.3 98 45.9
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 2.0e-10 69.3 98 45.9
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 5.9e-10 67.8 98 48.0
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 5.9e-10 67.8 98 48.0
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.0e-09 67.0 96 53.1
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 1.0e-09 67.0 107 47.7
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.3e-09 66.6 96 51.0
Medtr5g034360 Medicago truncatula HOM05D007293 ORTHO05D009143 1.3e-09 66.6 41 82.9
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 1.3e-09 66.6 109 46.8
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 1.7e-09 66.2 108 48.1
BolC2t08814H Brassica oleracea HOM05D007293 ORTHO05D009143 2.9e-09 65.5 98 45.9
SalBow1G2453 Salvia bowleyana HOM05D005882 ORTHO05D009143 2.9e-09 65.5 98 48.0
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 3.8e-09 65.1 105 47.6
A07p31100 Brassica napus HOM05D007293 ORTHO05D009143 1.1e-08 63.5 101 46.5
BraA07t30744Z Brassica rapa HOM05D007293 ORTHO05D009143 1.1e-08 63.5 101 46.5
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 1.1e-08 63.5 105 45.7
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 1.5e-08 63.2 104 47.1
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 1.9e-08 62.8 99 42.4
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 3.2e-08 62.0 106 45.3
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 3.2e-08 62.0 100 47.0
CSS0016211 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.2e-08 61.6 103 40.8
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 9.4e-08 60.5 104 44.2
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 2.1e-07 59.3 47 68.1
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 2.1e-07 59.3 100 48.0
DCAR_011205 Daucus carota HOM05D007293 ORTHO05D009143 2.7e-07 58.9 107 43.0
Hma1.2p1_0802F.1_g220360 Hydrangea macrophylla HOM05D007293 ORTHO05D009143 2.7e-07 58.9 102 50.0
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 2.7e-07 58.9 99 44.4
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 3.6e-07 58.5 107 40.2
Manes.13G142700 Manihot esculenta HOM05D002091 ORTHO05D002140 3.6e-07 58.5 101 43.6
Zm00001eb153880 Zea mays HOM05D007293 ORTHO05D009143 3.6e-07 58.5 104 44.2
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.7e-07 58.2 103 41.7
BcaB07g33183 Brassica carinata HOM05D027076 ORTHO05D027107 6.1e-07 57.8 86 48.8
Lsat_1_v5_gn_4_182280 Lactuca sativa HOM05D007293 ORTHO05D009143 6.1e-07 57.8 104 42.3
CDE04G1122 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 1.4e-06 56.6 47 66.0
Os01g0738000 Oryza sativa ssp. japonica HOM05D007293 ORTHO05D009143 1.4e-06 56.6 103 43.7
CSS0001505 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.0e-06 55.1 99 41.4
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 4.0e-06 55.1 45 62.2
CSS0049977 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 5.2e-06 54.7 101 38.6


User provided reference genes

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