Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 3.3e-201 704.9 369 100.0
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 7.6e-158 560.8 366 80.9
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 9.6e-145 517.3 344 77.3
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 6.2e-144 514.6 362 73.2
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.1e-143 512.3 362 72.9
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 3.1e-143 512.3 362 72.9
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 9.9e-142 507.3 362 72.4
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.6e-137 491.5 371 70.1
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 9.4e-116 421.0 327 66.1
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 2.6e-113 412.9 368 61.7
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 9.7e-113 411.0 322 65.8
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 1.8e-111 406.8 362 62.4
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 1.0e-109 401.0 315 66.7
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 1.9e-108 396.7 359 59.3
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 2.5e-108 396.4 359 61.0
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.0e-106 391.0 366 58.7
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 3.9e-106 389.0 365 57.3
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 7.4e-105 384.8 356 62.6
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 4.8e-104 382.1 357 57.7
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 1.4e-103 380.6 361 56.8
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 1.8e-103 380.2 367 55.9
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 2.4e-103 379.8 361 58.2
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 2.4e-103 379.8 380 56.1
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 3.2e-100 369.4 374 55.3
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 1.6e-99 367.1 361 55.7
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.7e-99 366.3 367 54.2
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 1.8e-98 363.6 361 54.0
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 2.3e-98 363.2 364 54.4
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 3.0e-98 362.8 359 55.2
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 7.5e-97 358.2 364 54.4
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 2.2e-96 356.7 331 56.2
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 3.7e-96 355.9 363 55.1
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 6.3e-96 355.1 331 55.9
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.2e-94 350.9 331 55.3
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 1.0e-93 347.8 359 55.2
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 2.1e-91 340.1 362 52.8
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 1.0e-90 337.8 349 55.3
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 1.8e-90 337.0 345 54.5
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 8.8e-90 334.7 372 51.9
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 1.5e-89 334.0 369 53.4
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 2.7e-86 323.2 361 51.0
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 1.3e-85 320.9 372 51.1
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 2.1e-83 313.5 273 61.2
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 3.6e-83 312.8 380 50.5
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 8.0e-83 311.6 273 60.4
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 5.2e-82 308.9 358 52.5
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 8.9e-82 308.1 352 52.3
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 1.5e-81 307.4 365 47.7
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 5.7e-81 305.4 360 48.9
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 5.7e-81 305.4 360 49.2
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 9.8e-81 304.7 366 47.3
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 9.8e-81 304.7 380 49.7
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 1.4e-79 300.8 361 48.5
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 1.6e-78 297.4 352 52.0
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.5e-76 290.8 267 62.9
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 1.9e-76 290.4 267 62.9
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 2.5e-76 290.0 318 50.6
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 1.4e-74 284.3 310 52.6
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 2.6e-73 280.0 344 46.2
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 5.8e-73 278.9 352 46.9
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 2.2e-72 276.9 334 45.8
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 1.7e-69 267.3 302 49.7
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 3.0e-69 266.5 302 51.3
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 3.9e-69 266.2 331 47.1
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 3.9e-69 266.2 335 46.3
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 6.6e-69 265.4 369 44.4
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 8.6e-69 265.0 363 48.8
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 1.1e-68 264.6 367 45.0
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 1.1e-68 264.6 367 45.0
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 4.3e-68 262.7 332 45.8
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 2.8e-67 260.0 285 51.9
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 5.2e-66 255.8 328 47.6
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.5e-65 254.2 332 46.4
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.7e-64 250.8 357 45.1
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 1.7e-64 250.8 212 63.7
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 3.7e-64 249.6 331 43.5
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 1.9e-63 247.3 281 50.9
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 1.9e-60 237.3 361 43.2
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.8e-58 230.7 255 50.6
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 1.3e-56 224.6 217 55.8
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 1.6e-54 217.6 231 54.1
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 6.0e-54 215.7 270 45.2
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 5.2e-50 202.6 386 35.8
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 9.9e-49 198.4 297 44.1
MD16G1286500 Malus domestica HOM05D006619 ORTHO05D008351 1.7e-48 197.6 141 71.6
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 8.4e-48 195.3 373 34.9
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 3.5e-46 189.9 173 63.0
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 3.6e-43 179.9 372 33.1
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 8.1e-43 178.7 352 34.7
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 2.4e-42 177.2 369 33.3
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 2.4e-42 177.2 351 35.0
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 5.8e-41 172.6 374 32.9
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 1.3e-40 171.4 354 33.9
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 2.2e-40 170.6 368 33.2
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 3.8e-40 169.9 372 32.8
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 1.1e-39 168.3 372 32.5
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 1.1e-39 168.3 372 32.5
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 4.6e-38 162.9 357 32.5
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 6.0e-38 162.5 356 32.3
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 8.7e-37 158.7 351 35.0
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.9e-36 157.5 351 35.0
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.4e-34 150.6 236 40.7
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 7.1e-31 139.0 308 32.5
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 1.2e-30 138.3 112 61.6
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 1.8e-26 124.4 278 31.7
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 5.3e-26 122.9 339 30.4
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 6.9e-26 122.5 288 32.6
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 4.9e-24 116.3 282 32.6
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 8.4e-24 115.5 272 30.9
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.2e-22 111.7 291 32.0
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 1.0e-21 108.6 93 59.1
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 2.1e-19 100.9 317 28.7
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.1e-19 100.9 112 47.3
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.1e-19 100.9 112 47.3
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 5.1e-13 79.7 80 51.2
COL.COLO4_08066 Corchorus olitorius HOM05D004199 ORTHO05D025158 1.6e-11 74.7 129 37.2
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 1.6e-11 74.7 65 53.8
MD16G1286600 Malus domestica HOM05D006619 ORTHO05D008351 3.6e-06 57.0 40 67.5


User provided reference genes

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