Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G014400 Prunus persica HOM05D000665 ORTHO05D000140 9.5e-95 350.1 172 100.0
Prupe.7G027800 Prunus persica HOM05D000665 ORTHO05D000140 6.3e-30 134.8 72 90.3
Prupe.1G245200 Prunus persica HOM05D000665 ORTHO05D000140 1.2e-28 130.6 72 84.7
Prupe.6G167700 Prunus persica HOM05D000665 ORTHO05D000140 1.0e-27 127.5 72 81.9
Prupe.4G256700 Prunus persica HOM05D000665 ORTHO05D000140 1.1e-26 124.0 72 81.9
RcHm_v2.0_Chr1g0330381 Rosa chinensis HOM05D000665 ORTHO05D000140 5.5e-26 121.7 77 75.3
Prupe.5G049300 Prunus persica HOM05D000665 ORTHO05D000140 3.0e-24 115.9 58 94.8
FAN26G1049 Fragaria x ananassa HOM05D000665 ORTHO05D000140 1.5e-23 113.6 77 67.5
FvH4_4g15662 Fragaria vesca HOM05D000665 ORTHO05D000140 1.7e-22 110.2 77 64.9
FvH4_2g13781 Fragaria vesca HOM05D000665 ORTHO05D000140 1.4e-21 107.1 77 64.9
COL.COLO4_07541 Corchorus olitorius HOM05D000665 ORTHO05D000140 6.9e-21 104.8 78 56.4
COL.COLO4_11921 Corchorus olitorius HOM05D000665 ORTHO05D000140 6.9e-21 104.8 78 56.4
COL.COLO4_35899 Corchorus olitorius HOM05D000665 ORTHO05D000140 6.9e-21 104.8 78 56.4
FAN27G2455 Fragaria x ananassa HOM05D001671 ORTHO05D000140 3.4e-20 102.4 72 66.7
Glyma.02G156600 Glycine max HOM05D000665 ORTHO05D000140 3.4e-20 102.4 75 58.7
Glyma.05G132400 Glycine max HOM05D000665 ORTHO05D000140 3.4e-20 102.4 75 58.7
Glyma.08G287150 Glycine max HOM05D000665 ORTHO05D000140 3.4e-20 102.4 75 58.7
Glyma.08G025200 Glycine max HOM05D000665 ORTHO05D000140 4.5e-20 102.1 71 64.8
Glyma.09G072900 Glycine max HOM05D000665 ORTHO05D000140 4.5e-20 102.1 71 64.8
Lj5g0014380 Lotus japonicus HOM05D000665 ORTHO05D000140 4.5e-20 102.1 75 57.3
COL.COLO4_16082 Corchorus olitorius HOM05D000665 ORTHO05D000140 7.7e-20 101.3 78 55.1
Glyma.09G131700 Glycine max HOM05D000665 ORTHO05D000140 1.0e-19 100.9 71 63.4
Glyma.11G208100 Glycine max HOM05D000665 ORTHO05D000140 1.0e-19 100.9 71 64.8
Glyma.19G070100 Glycine max HOM05D000665 ORTHO05D000140 1.0e-19 100.9 75 57.3
Lj1g0005320 Lotus japonicus HOM05D000665 ORTHO05D000140 1.0e-19 100.9 75 56.0
Lj2g0022922 Lotus japonicus HOM05D000665 ORTHO05D000140 1.0e-19 100.9 75 56.0
Prupe.5G014200 Prunus persica HOM05D000665 ORTHO05D000140 1.0e-19 100.9 58 79.3
Glyma.11G158600 Glycine max HOM05D000665 ORTHO05D000140 1.3e-19 100.5 71 63.4
COL.COLO4_13013 Corchorus olitorius HOM05D000665 ORTHO05D000140 2.2e-19 99.8 78 53.8
Glyma.05G097200 Glycine max HOM05D000665 ORTHO05D000140 2.2e-19 99.8 75 57.3
Lj1g0011582 Lotus japonicus HOM05D000665 ORTHO05D000140 2.2e-19 99.8 75 56.0
Lj6g0001109 Lotus japonicus HOM05D000665 ORTHO05D000140 2.2e-19 99.8 75 56.0
Glyma.20G028300 Glycine max HOM05D000665 ORTHO05D000140 2.9e-19 99.4 71 62.0
Glyma.16G081300 Glycine max HOM05D000665 ORTHO05D000140 5.0e-19 98.6 75 56.0
TPR.G40119 Trifolium pratense HOM05D000665 ORTHO05D000140 8.5e-19 97.8 78 52.6
Glyma.18G141600 Glycine max HOM05D000665 ORTHO05D000140 2.5e-18 96.3 75 56.0
Glyma.08G267100 Glycine max HOM05D000665 ORTHO05D000140 4.2e-18 95.5 75 54.7
Glyma.04G130400 Glycine max HOM05D000665 ORTHO05D000140 5.5e-18 95.1 71 60.6
Glyma.03G069900 Glycine max HOM05D000665 ORTHO05D000140 9.4e-18 94.4 75 53.3
Glyma.08G295300 Glycine max HOM05D000665 ORTHO05D000140 1.0e-16 90.9 71 57.7
Glyma.17G193900 Glycine max HOM05D000665 ORTHO05D000140 1.0e-16 90.9 71 57.7
Medtr7g061400 Medicago truncatula HOM05D000665 ORTHO05D000140 2.3e-16 89.7 78 51.3
FAN08G1891 Fragaria x ananassa HOM05D013617 ORTHO05D016313 3.9e-16 89.0 62 61.3
Medtr7g102860 Medicago truncatula HOM05D000665 ORTHO05D000140 3.9e-16 89.0 78 47.4
Glyma.06G254400 Glycine max HOM05D000665 ORTHO05D000140 1.3e-14 84.0 71 52.1
FAN08G1969 Fragaria x ananassa HOM05D000665 ORTHO05D000140 3.4e-12 75.9 49 71.4
FAN24G3347 Fragaria x ananassa HOM05D000665 ORTHO05D016313 2.9e-11 72.8 72 54.2
Nn6g33669 Nelumbo nucifera HOM05D000665 ORTHO05D000140 2.5e-10 69.7 73 43.8
FAN23G1453 Fragaria x ananassa HOM05D013617 ORTHO05D016313 1.2e-09 67.4 72 48.6
Haze_23288 Corylus avellana HOM05D000665 ORTHO05D000140 1.6e-09 67.0 71 40.8
Haze_23291 Corylus avellana HOM05D000665 ORTHO05D000140 1.6e-09 67.0 71 40.8
QL01p016365 Quercus lobata HOM05D000665 ORTHO05D000140 1.6e-09 67.0 71 40.8
TAR629G1231 Trochodendron aralioides HOM05D000665 ORTHO05D000140 2.7e-09 66.2 72 41.7
Dinv29316 Davidia involucrata HOM05D000001 ORTHO05D000003 6.1e-09 65.1 71 43.7
FAN08G1155 Fragaria x ananassa HOM05D013617 ORTHO05D016313 8.0e-09 64.7 54 61.1
Gohir.D05G075500 Gossypium hirsutum HOM05D000665 ORTHO05D000140 1.4e-08 63.9 71 38.0
Gorai.009G076900 Gossypium raimondii HOM05D000665 ORTHO05D000140 1.4e-08 63.9 71 38.0
RcHm_v2.0_Chr7g0231381 Rosa chinensis HOM05D000665 ORTHO05D000140 1.8e-08 63.5 69 40.6
Duzib168G0826 Durio zibethinus HOM05D000665 ORTHO05D000140 3.9e-08 62.4 71 38.0
QL01p016350 Quercus lobata HOM05D000665 ORTHO05D000140 3.9e-08 62.4 71 39.4
FAN24G3328 Fragaria x ananassa HOM05D000665 ORTHO05D000140 8.8e-08 61.2 77 45.5
Psat1g190200 Pisum sativum HOM05D000665 ORTHO05D000140 1.5e-07 60.5 59 40.7
PSO541G0575 Papaver somniferum HOM05D000665 ORTHO05D000140 2.0e-07 60.1 73 34.2
Rhsim13G0204800 Rhododendron simsii HOM05D000665 ORTHO05D000140 2.6e-07 59.7 71 42.3
RcHm_v2.0_Chr2g0139691 Rosa chinensis HOM05D000665 ORTHO05D000140 3.3e-07 59.3 69 37.7
Nn2g14680 Nelumbo nucifera HOM05D000665 ORTHO05D000140 4.4e-07 58.9 71 39.4
RcHm_v2.0_Chr4g0405761 Rosa chinensis HOM05D000665 ORTHO05D000140 4.4e-07 58.9 56 44.6
Thecc.09G253400 Theobroma cacao HOM05D000665 ORTHO05D000140 4.4e-07 58.9 71 35.2
TAR526G0001 Trochodendron aralioides HOM05D000665 ORTHO05D000140 4.4e-07 58.9 71 36.6
Ca_02662_v3 Cicer arietinum L. HOM05D000665 ORTHO05D000140 7.4e-07 58.2 71 32.4
SGA_v2.0_scaffold152G36847 Striga asiatica HOM05D000665 ORTHO05D000140 7.4e-07 58.2 74 40.5
Lj6g0024114 Lotus japonicus HOM05D000665 ORTHO05D000140 9.7e-07 57.8 71 39.4
ClCG03G012420 Citrullus lanatus HOM05D000665 ORTHO05D000140 1.3e-06 57.4 71 35.2
FvH4_6g32032 Fragaria vesca HOM05D000665 ORTHO05D000140 1.3e-06 57.4 69 34.8
Lj4C833G3 Lonicera japonica HOM05D000665 ORTHO05D000140 1.3e-06 57.4 71 36.6
Lj1g0000640 Lotus japonicus HOM05D000665 ORTHO05D000140 1.3e-06 57.4 75 38.7
COL.COLO4_06628 Corchorus olitorius HOM05D000665 ORTHO05D000140 1.7e-06 57.0 71 32.4
EL10Ac2g04238 Beta vulgaris HOM05D009145 ORTHO05D000140 2.2e-06 56.6 115 28.7
MBI01_g44372_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.2e-06 56.6 77 35.1
MBI18_g40970_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.2e-06 56.6 72 38.9
MBI10_g24541_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 2.8e-06 56.2 77 39.0
EL10Ac5g11631 Beta vulgaris HOM05D009145 ORTHO05D000140 4.8e-06 55.5 115 27.8
FAN27G0927 Fragaria x ananassa HOM05D000665 ORTHO05D000140 4.8e-06 55.5 36 66.7
vmacro12400 Vaccinium macrocarpon HOM05D000665 ORTHO05D000140 4.8e-06 55.5 72 38.9
AUR62027532 Chenopodium quinoa HOM05D000034 ORTHO05D000037 8.2e-06 54.7 71 31.0
Psat2g130400 Pisum sativum HOM05D000665 ORTHO05D000140 8.2e-06 54.7 71 31.0


User provided reference genes

Program Settings