Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G014000 Prunus persica HOM05D006782 ORTHO05D009662 3.1e-47 191.4 94 100.0
FAN08G2704 Fragaria x ananassa HOM05D006782 ORTHO05D009662 1.9e-20 102.4 94 59.6
FAN18G2623 Fragaria x ananassa HOM05D006782 ORTHO05D009662 1.9e-20 102.4 94 59.6
FvH4_5g24910 Fragaria vesca HOM05D006782 ORTHO05D009662 1.3e-18 96.3 92 57.6
FAN13G1891 Fragaria x ananassa HOM05D006782 ORTHO05D009662 2.3e-18 95.5 89 58.4
FAN04G0916 Fragaria x ananassa HOM05D006782 ORTHO05D009662 3.0e-18 95.1 89 58.4
Atru.chr6.2152 Acer truncatum HOM05D006782 ORTHO05D009662 3.3e-17 91.7 83 61.4
Ciclev10017790m.g Citrus clementina HOM05D006782 ORTHO05D009662 5.7e-17 90.9 87 57.5
QL12p003438 Quercus lobata HOM05D006782 ORTHO05D009662 2.4e-15 85.5 91 53.8
Thecc.03G320800 Theobroma cacao HOM05D006782 ORTHO05D009662 1.2e-14 83.2 87 59.8
Manes.17G001300 Manihot esculenta HOM05D006782 ORTHO05D009662 2.0e-14 82.4 86 57.0
Manes.15G184800 Manihot esculenta HOM05D006782 ORTHO05D009662 2.6e-14 82.0 80 60.0
CiPaw.11G078800 Carya illinoinensis HOM05D006782 ORTHO05D009662 2.2e-13 79.0 89 49.4
Lalb_Chr05g0215191 Lupinus albus HOM05D006782 ORTHO05D009662 5.0e-13 77.8 91 48.4
QL12p003492 Quercus lobata HOM05D006782 ORTHO05D009662 8.5e-13 77.0 87 50.6
Sabra01G0179500 Salix brachista HOM05D008950 ORTHO05D009662 1.4e-12 76.3 95 50.5
Potri.004G234800 Populus trichocarpa HOM05D008950 ORTHO05D009662 2.5e-12 75.5 88 52.3
Cfa021287 Carpinus fangiana HOM05D006782 ORTHO05D009662 3.2e-12 75.1 84 50.0
Duzib205G1200 Durio zibethinus HOM05D006782 ORTHO05D009662 1.2e-11 73.2 93 50.5
Hma1.2p1_0262F.1_g105300 Hydrangea macrophylla HOM05D006782 ORTHO05D009662 1.2e-11 73.2 85 45.9
Gohir.D08G169600 Gossypium hirsutum HOM05D006782 ORTHO05D009662 2.7e-11 72.0 85 50.6
Lalb_Chr16g0380461 Lupinus albus HOM05D006782 ORTHO05D009662 3.6e-11 71.6 91 45.1
Gohir.A08G148500 Gossypium hirsutum HOM05D006782 ORTHO05D009662 4.6e-11 71.2 85 50.6
TAR636G2777 Trochodendron aralioides HOM05D006782 ORTHO05D009662 7.9e-11 70.5 88 46.6
MELO3C010530.2 Cucumis melo HOM05D006782 ORTHO05D009662 1.4e-10 69.7 85 50.6
Gorai.004G176800 Gossypium raimondii HOM05D006782 ORTHO05D009662 2.3e-10 68.9 85 49.4
Glyma.16G108500 Glycine max HOM05D006782 ORTHO05D009662 5.1e-10 67.8 89 48.3
Phvul.002G122700 Phaseolus vulgaris HOM05D006782 ORTHO05D009662 5.1e-10 67.8 90 46.7
Glyma.09G218000 Glycine max HOM05D006782 ORTHO05D009662 6.7e-10 67.4 90 45.6
CiPaw.12G053100 Carya illinoinensis HOM05D006782 ORTHO05D009662 1.5e-09 66.2 101 49.5
ClCG11G016150 Citrullus lanatus HOM05D006782 ORTHO05D009662 2.5e-09 65.5 89 47.2
Lj4g0019286 Lotus japonicus HOM05D006782 ORTHO05D009662 2.5e-09 65.5 89 41.6
Lalb_Chr09g0325071 Lupinus albus HOM05D006782 ORTHO05D009662 2.5e-09 65.5 91 45.1
Haze_07985 Corylus avellana HOM05D006782 ORTHO05D009662 7.4e-09 63.9 73 49.3
Sed0025096 Sechium edule HOM05D006782 ORTHO05D009662 2.8e-08 62.0 65 52.3
Nn1g09299 Nelumbo nucifera HOM05D006782 ORTHO05D009662 3.7e-08 61.6 92 41.3
Oeu014070.1 Olea europaea HOM05D006782 ORTHO05D009662 8.2e-08 60.5 110 38.2
Sc07g0008080 Simmondsia chinensis HOM05D006782 ORTHO05D009662 8.2e-08 60.5 107 41.1
Medtr8g072170 Medicago truncatula HOM05D006782 ORTHO05D009662 1.4e-07 59.7 90 47.8
Sed0004700 Sechium edule HOM05D006782 ORTHO05D009662 1.4e-07 59.7 43 65.1
Sc07g0008090 Simmondsia chinensis HOM05D006782 ORTHO05D009662 1.8e-07 59.3 106 41.5
Glyma.16G108400 Glycine max HOM05D006782 ORTHO05D009662 3.1e-07 58.5 89 39.3
Glyma.01G152800 Glycine max HOM05D006782 ORTHO05D009662 4.1e-07 58.2 91 44.0
Medtr5g025730 Medicago truncatula HOM05D006782 ORTHO05D009662 4.1e-07 58.2 83 42.2
Lj2g0009146 Lotus japonicus HOM05D006782 ORTHO05D009662 1.5e-06 56.2 85 42.4
Glyma.16G108700 Glycine max HOM05D006782 ORTHO05D009662 3.4e-06 55.1 79 41.8


User provided reference genes

Program Settings