Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 2.9e-91 338.6 172 100.0
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 9.6e-63 243.8 161 75.8
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 4.0e-61 238.4 170 71.2
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 1.6e-57 226.5 172 65.1
FAN08G2564 Fragaria x ananassa HOM05D007367 ORTHO05D008866 3.9e-56 221.9 172 63.4
FAN13G0070 Fragaria x ananassa HOM05D007367 ORTHO05D008866 2.5e-55 219.2 171 63.2
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 3.6e-54 215.3 170 64.7
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 3.6e-54 215.3 172 64.5
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 3.1e-53 212.2 166 64.5
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 9.0e-53 210.7 166 63.9
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 2.9e-51 205.7 170 61.2
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 2.4e-50 202.6 173 61.8
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 2.4e-50 202.6 161 65.2
FAN04G0859 Fragaria x ananassa HOM05D007367 ORTHO05D008866 4.2e-50 201.8 172 60.5
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 5.4e-50 201.4 158 65.8
FAN18G1407 Fragaria x ananassa HOM05D007367 ORTHO05D008866 9.3e-50 200.7 172 61.0
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 4.6e-49 198.4 161 61.5
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 6.7e-48 194.5 168 57.1
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 3.3e-47 192.2 158 63.3
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 4.8e-46 188.3 161 58.4
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 1.1e-45 187.2 160 62.5
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 1.1e-45 187.2 152 59.2
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 1.1e-45 187.2 159 57.9
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 1.8e-45 186.4 160 61.9
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 1.2e-44 183.7 170 51.8
Gohir.D12G204000 Gossypium hirsutum HOM05D007367 ORTHO05D008866 1.5e-44 183.3 160 57.5
Gohir.A12G201200 Gossypium hirsutum HOM05D007367 ORTHO05D008866 5.8e-44 181.4 160 56.2
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 7.6e-44 181.0 171 55.6
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 7.6e-44 181.0 166 54.8
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 3.8e-43 178.7 170 51.8
CsaV3_4G007130 Cucumis sativus L. HOM05D007367 ORTHO05D008866 4.9e-43 178.3 155 56.8
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 6.4e-43 177.9 170 51.8
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 6.4e-43 177.9 166 56.6
Nn1g01985 Nelumbo nucifera HOM05D007367 ORTHO05D008866 1.1e-42 177.2 160 57.5
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 1.4e-42 176.8 160 60.0
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 1.4e-42 176.8 143 62.2
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 1.9e-42 176.4 149 59.7
Gorai.008G218800 Gossypium raimondii HOM05D007367 ORTHO05D008866 2.4e-42 176.0 153 57.5
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 2.4e-42 176.0 170 50.0
Sc07g0008020 Simmondsia chinensis HOM05D007367 ORTHO05D008866 3.2e-42 175.6 160 55.0
Lsat_1_v5_gn_5_43721 Lactuca sativa HOM05D007367 ORTHO05D008866 2.1e-41 172.9 153 56.2
TWI38G2056 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 2.7e-41 172.6 163 57.1
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 4.6e-41 171.8 158 57.0
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 6.0e-41 171.4 159 54.7
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 1.8e-40 169.9 160 52.5
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 1.8e-40 169.9 156 54.5
VMungo0251G1728 Vigna mungo HOM05D007367 ORTHO05D008866 3.0e-40 169.1 163 49.1
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 5.1e-40 168.3 159 55.3
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 5.1e-40 168.3 155 54.8
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 8.7e-40 167.5 155 54.8
TWI38G0281 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 8.7e-40 167.5 161 57.1
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 1.1e-39 167.2 171 51.5
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 1.9e-39 166.4 154 56.5
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 2.5e-39 166.0 161 50.3
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 5.6e-39 164.9 168 49.4
Atru.chr8.2637 Acer truncatum HOM05D007367 ORTHO05D008866 7.4e-39 164.5 170 52.9
HanXRQChr02g0034081 Helianthus annuus HOM05D007367 ORTHO05D008866 2.8e-38 162.5 152 55.3
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 2.8e-38 162.5 167 51.5
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 4.8e-38 161.8 155 52.9
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 4.0e-37 158.7 154 53.9
Phvul.003G266000 Phaseolus vulgaris HOM05D007367 ORTHO05D008866 6.9e-37 157.9 185 44.3
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 6.9e-37 157.9 159 51.6
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 1.2e-36 157.1 154 52.6
arahy.Tifrunner.gnm1.ann1.I4PABW Arachis hypogaea HOM05D007367 ORTHO05D008866 2.0e-36 156.4 197 43.7
EL10Ac8g19394 Beta vulgaris HOM05D007367 ORTHO05D008866 2.0e-36 156.4 163 47.2
Aqoxy7G01946 Aquilegia oxysepala HOM05D000773 ORTHO05D008866 4.5e-36 155.2 153 49.7
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 1.3e-35 153.7 170 47.6
CDE02G0575 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 4.9e-35 151.8 145 51.7
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 6.5e-35 151.4 159 48.4
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 1.1e-34 150.6 159 48.4
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 2.5e-34 149.4 159 47.8
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 3.2e-34 149.1 159 51.6
PGR042G2818 Punica granatum HOM05D007367 ORTHO05D008866 9.3e-34 147.5 154 48.1
A01p11220 Brassica napus HOM05D007367 ORTHO05D008866 1.3e-32 143.7 159 45.9
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 1.3e-32 143.7 169 42.0
BraA01t01068Z Brassica rapa HOM05D007367 ORTHO05D008866 1.8e-32 143.3 159 45.9
Os08g0162500 Oryza sativa ssp. japonica HOM05D007367 ORTHO05D008866 8.7e-32 141.0 157 45.2
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 1.1e-31 140.6 221 40.3
PSO063G4690 Papaver somniferum HOM05D007367 ORTHO05D008866 1.9e-31 139.8 152 48.7
PGSC0003DMG400029288 Solanum tuberosum HOM05D007367 ORTHO05D008866 3.3e-31 139.0 179 45.8
unitig_748.g8147 Utricularia gibba HOM05D007367 ORTHO05D008866 1.2e-28 130.6 182 40.7
Zm00001eb415480 Zea mays HOM05D007367 ORTHO05D008866 1.3e-27 127.1 136 48.5
Ah.09g231810 Amaranthus hybridus HOM05D007367 ORTHO05D008866 1.4e-26 123.6 163 41.7
AUR62030407 Chenopodium quinoa HOM05D007367 ORTHO05D008866 2.5e-26 122.9 173 42.2
PSO675G5685 Papaver somniferum HOM05D007367 ORTHO05D008866 5.5e-26 121.7 117 51.3
DCAR_002187 Daucus carota HOM05D007367 ORTHO05D008866 1.6e-25 120.2 94 64.9
Thecc.04G178000 Theobroma cacao HOM05D000090 ORTHO05D001322 1.6e-25 120.2 82 75.6
HPP92_022724 Vanilla planifolia HOM05D007367 ORTHO05D008866 1.6e-25 120.2 166 39.2
CDE11G0580 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 5.1e-24 115.2 115 52.2
Nitab4.5_0011129g0040 Nicotiana tabacum HOM05D007367 ORTHO05D008866 6.7e-24 114.8 122 52.5
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 2.5e-23 112.8 188 38.3
Thhalv10026808m.g Eutrema salsugineum HOM05D007367 ORTHO05D008866 2.2e-22 109.8 101 55.4
Haze_08425 Corylus avellana HOM05D007367 ORTHO05D008866 1.4e-21 107.1 108 56.5
Oeu046776.1 Olea europaea HOM05D007367 ORTHO05D008866 3.7e-14 82.4 98 48.0
Nitab4.5_0001913g0180 Nicotiana tabacum HOM05D007367 ORTHO05D008866 8.2e-14 81.3 99 48.5
Eucgr.E01150 Eucalyptus grandis HOM05D007367 ORTHO05D008866 5.3e-13 78.6 84 51.2
Atru.chr8.2641 Acer truncatum HOM05D007367 ORTHO05D008866 1.5e-12 77.0 128 39.8
Actinidia01248 Actinidia chinensis HOM05D007367 ORTHO05D008866 2.6e-12 76.3 84 53.6
Cpa.g.sc103.6 Carica papaya HOM05D007367 ORTHO05D008866 2.6e-12 76.3 71 57.7
Oeu046774.1 Olea europaea HOM05D007367 ORTHO05D008866 3.8e-11 72.4 49 65.3
DCAR_002186 Daucus carota HOM05D007367 ORTHO05D008866 2.1e-09 66.6 78 44.9
SEGI_16341 Sequoiadendron giganteum HOM05D007367 ORTHO05D008866 2.7e-09 66.2 101 38.6
Gohir.A08G148800 Gossypium hirsutum HOM05D036757 ORTHO05D048069 3.0e-08 62.8 95 45.3
Atru.chr8.2644 Acer truncatum HOM05D007367 ORTHO05D008866 3.9e-08 62.4 58 53.4
SHI32769 Sapria himalayana HOM05D000002 ORTHO05D000001 4.4e-07 58.9 50 56.0
Gorai.004G177100 Gossypium raimondii HOM05D036757 ORTHO05D048069 4.8e-06 55.5 110 37.3
Pp3c23_7640 Physcomitrium patens HOM05D007367 ORTHO05D008866 8.2e-06 54.7 154 26.0


User provided reference genes

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