Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G008500 Prunus persica HOM05D000979 ORTHO05D335607 2.1e-177 625.5 304 100.0
Prupe.5G178500 Prunus persica HOM05D000979 ORTHO05D003182 9.4e-21 105.1 88 67.0
RcHm_v2.0_Chr7g0179631 Rosa chinensis HOM05D000979 ORTHO05D003182 2.1e-20 104.0 88 65.9
FvH4_5g16460 Fragaria vesca HOM05D000979 ORTHO05D003182 3.6e-20 103.2 88 65.9
FAN18G1931 Fragaria x ananassa HOM05D000979 ORTHO05D003182 3.6e-20 103.2 88 65.9
FAN08G3080 Fragaria x ananassa HOM05D000979 ORTHO05D003182 2.3e-19 100.5 88 64.8
Eucgr.B00341 Eucalyptus grandis HOM05D000979 ORTHO05D003182 9.7e-18 95.1 92 56.5
Thecc.03G005300 Theobroma cacao HOM05D000979 ORTHO05D003182 1.3e-17 94.7 88 56.8
COL.COLO4_04325 Corchorus olitorius HOM05D000979 ORTHO05D003182 2.2e-17 94.0 84 60.7
Rhsim08G0168300 Rhododendron simsii HOM05D000979 ORTHO05D003182 2.2e-17 94.0 67 70.1
Ah.11g046160 Amaranthus hybridus HOM05D000306 ORTHO05D003182 4.8e-17 92.8 107 53.3
Cpa.g.sc110.19 Carica papaya HOM05D000979 ORTHO05D003182 4.8e-17 92.8 88 56.8
Haze_07442 Corylus avellana HOM05D000979 ORTHO05D003182 4.8e-17 92.8 83 60.2
Duzib084G1093 Durio zibethinus HOM05D000979 ORTHO05D003182 4.8e-17 92.8 88 55.7
MD14G1185600 Malus domestica HOM05D000979 ORTHO05D003182 4.8e-17 92.8 71 64.8
CiPaw.11G031100 Carya illinoinensis HOM05D000979 ORTHO05D003182 6.3e-17 92.4 92 55.4
arahy.Tifrunner.gnm1.ann1.1E0YQ2 Arachis hypogaea HOM05D000979 ORTHO05D003182 8.2e-17 92.0 92 55.4
arahy.Tifrunner.gnm1.ann1.CGIH3L Arachis hypogaea HOM05D000979 ORTHO05D003182 8.2e-17 92.0 92 55.4
CANSAT80G0008 Cannabis sativa HOM05D000979 ORTHO05D003182 8.2e-17 92.0 88 56.8
Gohir.A09G170400 Gossypium hirsutum HOM05D000979 ORTHO05D003182 1.1e-16 91.7 84 58.3
Gohir.D09G166100 Gossypium hirsutum HOM05D000979 ORTHO05D003182 1.1e-16 91.7 84 58.3
Gorai.006G187900 Gossypium raimondii HOM05D000979 ORTHO05D003182 1.1e-16 91.7 84 58.3
SGA_v2.0_scaffold467G52027 Striga asiatica HOM05D000979 ORTHO05D003182 1.1e-16 91.7 73 63.0
ATR1149G103 Amborella trichopoda HOM05D000979 ORTHO05D003182 1.4e-16 91.3 69 68.1
Cfa019072 Carpinus fangiana HOM05D000979 ORTHO05D003182 1.4e-16 91.3 83 59.0
Ciclev10019471m.g Citrus clementina HOM05D000979 ORTHO05D003182 1.4e-16 91.3 73 64.4
Lsat_1_v5_gn_1_12180 Lactuca sativa HOM05D000979 ORTHO05D003182 1.4e-16 91.3 70 67.1
CSS0036928 Camellia sinensis var. sinensis HOM05D000979 ORTHO05D003182 1.8e-16 90.9 93 55.9
ECA247G1935 Erigeron canadensis HOM05D000979 ORTHO05D003182 1.8e-16 90.9 70 65.7
Glyma.17G092900 Glycine max HOM05D000979 ORTHO05D003182 1.8e-16 90.9 88 56.8
Oeu016338.1 Olea europaea HOM05D000979 ORTHO05D003182 1.8e-16 90.9 88 56.8
QL10p012440 Quercus lobata HOM05D000979 ORTHO05D003182 1.8e-16 90.9 88 56.8
HanXRQChr02g0044201 Helianthus annuus HOM05D000979 ORTHO05D003182 2.4e-16 90.5 70 65.7
Lalb_Chr12g0201401 Lupinus albus HOM05D000979 ORTHO05D003182 2.4e-16 90.5 88 58.0
Sed0018463 Sechium edule HOM05D000979 ORTHO05D003182 2.4e-16 90.5 66 71.2
CSS0020489 Camellia sinensis var. sinensis HOM05D000979 ORTHO05D003182 3.1e-16 90.1 81 60.5
CSS0042313 Camellia sinensis var. sinensis HOM05D000979 ORTHO05D003182 3.1e-16 90.1 81 60.5
Dinv20695 Davidia involucrata HOM05D000979 ORTHO05D003182 3.1e-16 90.1 84 59.5
Ca_21893_v3 Cicer arietinum L. HOM05D000979 ORTHO05D003182 4.1e-16 89.7 82 59.8
Potri.015G071400 Populus trichocarpa HOM05D000979 ORTHO05D003182 4.1e-16 89.7 88 56.8
VMungo1215G0019 Vigna mungo HOM05D000979 ORTHO05D003182 4.1e-16 89.7 85 58.8
Sabra15G0096400 Salix brachista HOM05D000979 ORTHO05D003182 5.3e-16 89.4 88 56.8
Actinidia33039 Actinidia chinensis HOM05D000979 ORTHO05D003182 7.0e-16 89.0 73 64.4
CAN.G853.9 Capsicum annuum HOM05D000979 ORTHO05D003182 7.0e-16 89.0 69 65.2
MELO3C017118.2 Cucumis melo HOM05D000979 ORTHO05D003182 7.0e-16 89.0 83 57.8
CsaV3_1G001780 Cucumis sativus L. HOM05D000979 ORTHO05D003182 7.0e-16 89.0 81 60.5
Migut.I00053 Erythranthe guttata HOM05D000979 ORTHO05D003182 7.0e-16 89.0 80 61.2
Nitab4.5_0001286g0080 Nicotiana tabacum HOM05D000979 ORTHO05D003182 7.0e-16 89.0 73 61.6
Nitab4.5_0001642g0070 Nicotiana tabacum HOM05D000979 ORTHO05D003182 7.0e-16 89.0 73 61.6
Peaxi162Scf00017g02521 Petunia axillaris HOM05D000979 ORTHO05D003182 7.0e-16 89.0 73 61.6
Lj4g0017712 Lotus japonicus HOM05D000979 ORTHO05D003182 9.1e-16 88.6 84 58.3
ClCG06G016740 Citrullus lanatus HOM05D000979 ORTHO05D003182 1.2e-15 88.2 81 60.5
Phvul.003G197300 Phaseolus vulgaris HOM05D000979 ORTHO05D003182 1.2e-15 88.2 84 58.3
Aqoxy3G03093 Aquilegia oxysepala HOM05D000979 ORTHO05D003182 1.6e-15 87.8 81 59.3
DCAR_026114 Daucus carota HOM05D000979 ORTHO05D003182 1.6e-15 87.8 68 69.1
Manes.06G101300 Manihot esculenta HOM05D000979 ORTHO05D003182 1.6e-15 87.8 85 60.0
Solyc03g113900.4 Solanum lycopersicum HOM05D000979 ORTHO05D003182 1.6e-15 87.8 66 68.2
Sopen03g032950 Solanum pennellii HOM05D000979 ORTHO05D003182 1.6e-15 87.8 66 68.2
PGSC0003DMG401024473 Solanum tuberosum HOM05D000979 ORTHO05D003182 1.6e-15 87.8 66 68.2
Sp1g23770 Schrenkiella parvula HOM05D000979 ORTHO05D003182 2.0e-15 87.4 85 55.3
Nn4g22903 Nelumbo nucifera HOM05D000979 ORTHO05D003182 2.6e-15 87.0 84 56.0
THA.LOC104808302 Tarenaya hassleriana HOM05D000979 ORTHO05D003182 2.6e-15 87.0 88 54.5
TAR374G0531 Trochodendron aralioides HOM05D000979 ORTHO05D003182 2.6e-15 87.0 77 62.3
GSVIVG01007818001 Vitis vinifera HOM05D000979 ORTHO05D003182 2.6e-15 87.0 73 63.0
Cc04_g13530 Coffea canephora HOM05D000979 ORTHO05D003182 3.5e-15 86.7 89 55.1
AL1G40950 Arabidopsis lyrata HOM05D000979 ORTHO05D003182 4.5e-15 86.3 85 54.1
EL10Ac5g10823 Beta vulgaris HOM05D000979 ORTHO05D003182 4.5e-15 86.3 88 54.5
AUR62008279 Chenopodium quinoa HOM05D000979 ORTHO05D003182 4.5e-15 86.3 88 55.7
Glyma.U031507 Glycine max HOM05D000979 ORTHO05D003182 4.5e-15 86.3 88 54.5
TPR.G37545 Trifolium pratense HOM05D000979 ORTHO05D003182 4.5e-15 86.3 85 57.6
Medtr4g106370 Medicago truncatula HOM05D000979 ORTHO05D003182 5.9e-15 85.9 88 55.7
Nn3g16991 Nelumbo nucifera HOM05D000979 ORTHO05D003182 5.9e-15 85.9 84 54.8
PGR083G1350 Punica granatum HOM05D000979 ORTHO05D003182 5.9e-15 85.9 85 56.5
Lj9C453T5 Lonicera japonica HOM05D000979 ORTHO05D003182 7.7e-15 85.5 69 66.7
Sc04g0002070 Simmondsia chinensis HOM05D000979 ORTHO05D003182 7.7e-15 85.5 73 61.6
TWI81G0481 Tripterygium wilfordii HOM05D000979 ORTHO05D003182 7.7e-15 85.5 84 56.0
Psat4g056000 Pisum sativum HOM05D000979 ORTHO05D003182 1.0e-14 85.1 88 55.7
AT1G27520 Arabidopsis thaliana HOM05D000979 ORTHO05D003182 1.3e-14 84.7 85 54.1
BcaC05g26753 Brassica carinata HOM05D000979 ORTHO05D003182 1.3e-14 84.7 85 55.3
BraA09t39355Z Brassica rapa HOM05D000979 ORTHO05D003182 2.2e-14 84.0 85 54.1
Thhalv10007201m.g Eutrema salsugineum HOM05D000979 ORTHO05D003182 2.9e-14 83.6 85 52.9
PSO832G4469 Papaver somniferum HOM05D000979 ORTHO05D003182 2.9e-14 83.6 84 57.1
Hund09408 Selenicereus undatus HOM05D000979 ORTHO05D003182 3.8e-14 83.2 88 53.4
Carub.0001s2607 Capsella rubella HOM05D000979 ORTHO05D003182 6.5e-14 82.4 85 52.9
unitig_750.g28479 Utricularia gibba HOM05D000979 ORTHO05D003182 6.5e-14 82.4 61 65.6
BcaC05g26569 Brassica carinata HOM05D000979 ORTHO05D003182 8.5e-14 82.0 88 51.1
C05p26210 Brassica napus HOM05D000979 ORTHO05D003182 8.5e-14 82.0 88 51.1
BolC5t31335H Brassica oleracea HOM05D000979 ORTHO05D003182 8.5e-14 82.0 88 51.1
MBI15_g03390_MAGBIO Magnolia biondii HOM05D000979 ORTHO05D003182 8.5e-14 82.0 84 52.4
vmacro19358 Vaccinium macrocarpon HOM05D000979 ORTHO05D003182 8.5e-14 82.0 80 57.5
A09p38490 Brassica napus HOM05D000979 ORTHO05D003182 1.1e-13 81.6 73 57.5
Potri.012G076600 Populus trichocarpa HOM05D000979 ORTHO05D003182 1.5e-13 81.3 88 53.4
HPP92_017566 Vanilla planifolia HOM05D000979 ORTHO05D003182 3.2e-13 80.1 64 59.4
Os02g0741300 Oryza sativa ssp. japonica HOM05D000979 ORTHO05D003182 4.2e-13 79.7 84 51.2
CDE06G1664 Ceratophyllum demersum HOM05D000979 ORTHO05D003182 1.6e-12 77.8 69 53.6
Zm00001eb254180 Zea mays HOM05D000979 ORTHO05D003182 2.7e-12 77.0 84 50.0
SEGI_31358 Sequoiadendron giganteum HOM05D000979 ORTHO05D003182 8.8e-11 72.0 59 57.6
GSVIVG01035174001 Vitis vinifera HOM05D000979 ORTHO05D003182 1.1e-10 71.6 66 59.1
SMO145G0001 Selaginella moellendorffii HOM05D000979 ORTHO05D003182 4.4e-10 69.7 66 53.0
SMO366G0001 Selaginella moellendorffii HOM05D000979 ORTHO05D003182 4.4e-10 69.7 66 53.0
Mapoly0181s0015 Marchantia polymorpha HOM05D000979 ORTHO05D003182 7.5e-10 68.9 60 55.0
MCO15G188 Micromonas commoda HOM05D000979 ORTHO05D003182 9.7e-10 68.6 74 45.9
Prupe.3G132800 Prunus persica HOM05D000336 ORTHO05D015159 2.4e-08 63.9 43 69.8
Prupe.4G212600 Prunus persica HOM05D000336 ORTHO05D015159 4.1e-08 63.2 43 67.4
Prupe.4G209900 Prunus persica HOM05D000336 ORTHO05D015159 7.0e-08 62.4 43 67.4
Sabra15G0076500 Salix brachista HOM05D000979 ORTHO05D003182 7.7e-07 58.9 65 52.3
PRCOL_00004503 Prasinoderma coloniale HOM05D000979 ORTHO05D003182 2.9e-06 57.0 57 54.4
Prupe.8G049900 Prunus persica HOM05D000336 ORTHO05D015159 5.0e-06 56.2 38 63.2
Prupe.8G050900 Prunus persica HOM05D000336 ORTHO05D015159 6.5e-06 55.8 38 68.4
Prupe.8G051100 Prunus persica HOM05D000336 ORTHO05D015159 6.5e-06 55.8 38 68.4
Prupe.8G051500 Prunus persica HOM05D000336 ORTHO05D015159 6.5e-06 55.8 38 68.4


User provided reference genes

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