Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.6e-169 599.4 304 100.0
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 1.3e-115 420.2 291 78.0
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 1.7e-115 419.9 288 74.7
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.2e-110 402.9 288 72.9
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.7e-110 402.1 288 72.9
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 4.8e-110 401.7 288 72.6
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.4e-109 400.2 288 72.6
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 7.7e-108 394.4 303 69.3
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 1.6e-100 370.2 289 67.8
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 5.9e-100 368.2 289 66.4
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 1.3e-99 367.1 303 64.7
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.7e-99 366.7 289 66.8
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 3.9e-99 365.5 289 66.8
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 1.5e-98 363.6 289 65.4
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 6.8e-96 354.8 289 63.0
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 5.8e-95 351.7 291 63.9
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 7.5e-95 351.3 289 63.7
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 9.8e-95 350.9 291 63.6
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 1.7e-94 350.1 294 64.6
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 2.9e-94 349.4 269 68.0
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 4.9e-94 348.6 287 64.1
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 6.4e-94 348.2 293 63.1
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 6.4e-94 348.2 284 65.1
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 6.4e-94 348.2 270 64.8
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 1.1e-93 347.4 287 64.5
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.4e-93 347.1 272 67.3
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 2.0e-92 343.2 289 61.6
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 2.7e-92 342.8 278 65.8
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 3.5e-92 342.4 281 61.9
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 3.3e-90 335.9 186 84.9
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 5.6e-90 335.1 258 67.1
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.8e-89 332.8 289 60.9
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 4.7e-89 332.0 193 80.8
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 6.2e-89 331.6 305 59.3
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.1e-88 330.9 290 60.3
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 2.3e-88 329.7 291 57.4
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 3.1e-88 329.3 289 61.2
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 1.5e-87 327.0 289 59.9
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.5e-87 327.0 294 60.5
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 2.0e-87 326.6 199 77.4
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 9.8e-87 324.3 287 57.8
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 4.9e-86 322.0 294 59.2
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.4e-85 320.5 293 58.0
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 2.4e-85 319.7 254 63.0
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 3.2e-85 319.3 296 62.2
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 1.6e-84 317.0 249 65.1
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 1.6e-84 317.0 209 68.9
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 2.1e-84 316.6 288 57.3
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 1.0e-83 314.3 292 61.0
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 6.6e-83 311.6 270 60.0
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 8.6e-83 311.2 212 72.2
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.5e-82 310.5 212 72.6
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 1.5e-82 310.5 260 61.2
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 1.5e-82 310.5 244 64.3
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 2.5e-82 309.7 212 71.7
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 3.3e-82 309.3 196 73.5
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 4.3e-82 308.9 244 64.8
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 5.6e-82 308.5 287 56.4
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 7.3e-82 308.1 275 57.8
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 7.3e-82 308.1 229 66.8
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 9.5e-82 307.8 244 64.3
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.6e-81 307.0 260 60.4
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 6.2e-81 305.1 227 66.5
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.1e-80 304.3 294 57.5
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.8e-80 303.5 296 57.1
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 2.3e-80 303.1 226 65.0
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 2.3e-80 303.1 272 58.8
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 4.0e-80 302.4 300 56.0
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 4.0e-80 302.4 202 70.3
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 4.0e-80 302.4 173 81.5
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 1.2e-79 300.8 288 55.6
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 3.4e-79 299.3 192 74.0
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 3.4e-79 299.3 197 73.1
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 9.9e-79 297.7 288 55.6
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 1.7e-78 297.0 159 87.4
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 2.2e-78 296.6 230 64.3
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 2.9e-78 296.2 291 53.6
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 2.9e-78 296.2 291 53.6
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 3.7e-78 295.8 275 55.6
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 4.9e-78 295.4 316 52.5
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 8.3e-78 294.7 231 64.5
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 1.9e-77 293.5 294 53.1
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.9e-77 293.5 294 53.1
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 1.9e-77 293.5 294 54.8
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 5.4e-77 292.0 315 51.4
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 7.1e-77 291.6 292 53.4
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 9.2e-77 291.2 298 57.0
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 2.7e-76 289.7 231 63.2
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 3.5e-76 289.3 288 53.8
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 1.0e-75 287.7 186 72.6
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 1.7e-75 287.0 217 66.4
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.7e-75 287.0 288 53.5
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 2.3e-75 286.6 186 72.0
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 3.0e-75 286.2 289 53.6
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 7.3e-74 281.6 203 67.5
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.2e-73 280.8 192 70.3
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 1.2e-73 280.8 232 61.6
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 4.7e-73 278.9 181 74.6
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 2.4e-72 276.6 177 74.6
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 7.6e-71 271.6 222 63.1
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 7.6e-71 271.6 181 71.8
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 2.2e-70 270.0 200 66.0
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 3.8e-70 269.2 147 85.0
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 5.4e-69 265.4 295 51.2
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 2.1e-68 263.5 266 52.6
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 5.1e-67 258.8 243 52.3
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 9.6e-66 254.6 232 54.3
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 1.6e-65 253.8 160 77.5
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 1.8e-64 250.4 202 58.9
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 5.3e-64 248.8 212 55.7
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 1.2e-63 247.7 151 80.1
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 3.2e-53 213.0 188 54.8
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 2.1e-52 210.3 121 81.0
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 3.9e-51 206.1 177 56.5
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 6.7e-51 205.3 199 51.8
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.9e-50 203.8 264 43.9
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 8.1e-49 198.4 194 50.5
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 8.4e-46 188.3 98 86.7
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 4.1e-32 142.9 79 82.3
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 2.9e-30 136.7 69 88.4
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 3.9e-19 99.8 114 50.9
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 1.0e-14 85.1 58 69.0
Cpa.g.c30633.1 Carica papaya HOM05D005712 ORTHO05D120172 6.3e-09 65.9 56 62.5
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 1.3e-06 58.2 40 67.5
HPP92_022533 Vanilla planifolia HOM05D004721 ORTHO05D005765 1.7e-06 57.8 133 33.1


User provided reference genes

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