Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 1.1e-136 490.0 240 100.0
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 2.3e-107 392.5 258 80.2
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 3.8e-102 375.2 256 77.3
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 8.5e-102 374.0 257 76.3
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.7e-100 368.2 234 79.5
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.4e-99 366.7 258 74.8
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.0e-98 362.8 289 68.2
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 4.3e-85 318.5 196 80.6
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 8.0e-84 314.3 220 70.5
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 6.8e-83 311.2 259 63.7
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 8.3e-81 304.3 220 68.2
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 3.2e-80 302.4 233 67.4
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 5.0e-78 295.0 238 63.4
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 1.2e-76 290.4 234 64.1
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 1.2e-76 290.4 233 63.9
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 1.4e-75 287.0 193 74.1
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 4.0e-75 285.4 222 64.4
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 5.2e-75 285.0 214 68.7
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 5.2e-75 285.0 251 59.0
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.0e-74 283.1 226 64.6
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 2.2e-73 279.6 245 61.2
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 2.9e-73 279.3 198 71.2
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 2.9e-73 279.3 197 70.1
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 4.9e-73 278.5 249 60.2
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 6.4e-73 278.1 190 72.1
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.9e-72 276.6 192 72.4
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.4e-72 276.2 191 71.2
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 2.1e-71 273.1 232 60.3
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 2.1e-71 273.1 251 58.2
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 4.6e-71 271.9 193 68.4
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 2.3e-70 269.6 193 71.0
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 2.3e-70 269.6 193 68.4
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 3.9e-70 268.9 223 59.2
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 6.6e-70 268.1 191 69.1
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 6.6e-70 268.1 195 67.2
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 8.6e-70 267.7 219 60.7
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 1.1e-69 267.3 199 68.3
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 1.5e-69 266.9 192 67.7
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 1.5e-69 266.9 200 67.0
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 1.5e-69 266.9 194 67.5
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 2.5e-69 266.2 220 60.9
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 3.3e-69 265.8 183 71.6
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 4.3e-69 265.4 202 66.3
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 5.6e-69 265.0 213 60.6
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 7.3e-69 264.6 202 65.8
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 9.5e-69 264.2 193 66.8
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 9.5e-69 264.2 200 66.0
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 9.5e-69 264.2 218 61.0
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 9.5e-69 264.2 224 61.2
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 1.6e-68 263.5 193 65.8
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 2.1e-68 263.1 199 65.8
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 2.1e-68 263.1 232 62.5
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 2.1e-68 263.1 194 67.5
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 2.1e-68 263.1 202 65.8
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 3.6e-68 262.3 246 57.3
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 4.7e-68 261.9 193 65.8
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 8.1e-68 261.2 193 65.8
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 8.1e-68 261.2 195 64.1
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 1.4e-67 260.4 200 65.0
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 1.4e-67 260.4 242 57.9
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.4e-67 260.4 218 60.6
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 1.8e-67 260.0 192 67.7
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 5.2e-67 258.5 196 66.8
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 5.2e-67 258.5 194 66.0
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 5.2e-67 258.5 217 58.1
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 6.8e-67 258.1 246 55.3
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 1.5e-66 256.9 255 53.3
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 4.4e-66 255.4 238 55.5
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 1.7e-65 253.4 213 59.6
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 4.9e-65 251.9 232 55.2
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 6.4e-65 251.5 194 64.9
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 1.1e-64 250.8 208 60.1
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 2.4e-64 249.6 209 62.7
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 3.2e-64 249.2 193 64.2
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 9.2e-64 247.7 255 52.5
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.6e-63 246.9 163 71.2
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 6.0e-63 245.0 191 63.4
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 1.3e-62 243.8 169 65.7
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 1.7e-62 243.4 166 71.7
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 5.1e-62 241.9 205 62.9
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 8.6e-62 241.1 207 61.4
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.1e-61 240.7 174 67.2
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 1.5e-61 240.4 206 62.1
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 5.6e-61 238.4 162 72.2
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 5.6e-61 238.4 233 51.9
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 1.2e-60 237.3 218 56.0
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 3.1e-59 232.6 229 53.7
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 3.1e-59 232.6 166 66.3
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 4.0e-59 232.3 244 52.9
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.5e-58 230.3 220 52.3
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 3.4e-58 229.2 195 59.5
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 8.4e-57 224.6 163 64.4
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 1.9e-56 223.4 191 61.8
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.9e-56 223.4 190 58.9
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 4.2e-56 222.2 196 57.7
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 7.1e-56 221.5 344 41.0
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 9.6e-53 211.1 198 55.6
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 6.0e-47 191.8 116 77.6
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 1.8e-46 190.3 189 48.7
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 8.7e-46 188.0 208 44.7
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 1.2e-39 167.5 132 62.1
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 8.7e-38 161.4 195 42.6
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 6.0e-31 138.7 162 42.6
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 6.0e-31 138.7 135 55.6
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 9.7e-29 131.3 160 36.9
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 6.5e-25 118.6 66 78.8
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 6.5e-25 118.6 109 57.8
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 9.7e-21 104.8 222 33.8
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.4e-19 100.1 77 67.5
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 5.5e-16 89.0 196 28.6
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 2.7e-15 86.7 176 31.8
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 5.1e-14 82.4 77 54.5
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 4.8e-12 75.9 105 42.9
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 3.6e-07 59.7 94 40.4
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 8.0e-07 58.5 32 81.2


User provided reference genes

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