Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.4e-270 935.6 452 100.0
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.3e-207 724.2 454 77.8
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 2.3e-204 715.7 448 77.2
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 3.3e-203 711.8 451 76.3
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.0e-201 705.3 435 78.9
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 5.7e-200 701.0 446 76.2
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 1.7e-199 699.5 451 74.9
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.7e-199 698.4 435 78.2
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 8.3e-199 697.2 452 72.6
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 1.7e-196 689.5 425 77.2
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.1e-195 686.8 441 74.8
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 2.5e-195 685.6 437 76.2
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 8.0e-194 680.6 430 74.9
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 2.3e-193 679.1 443 73.4
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 3.1e-193 678.7 452 72.6
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 6.8e-193 677.6 430 75.6
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.5e-192 676.4 430 75.6
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 7.5e-192 674.1 433 74.6
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 2.2e-191 672.5 450 70.7
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 3.7e-191 671.8 428 74.5
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 7.0e-190 667.5 425 74.1
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 1.2e-189 666.8 436 71.6
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 4.6e-189 664.8 449 69.7
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 1.0e-188 663.7 429 73.9
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 1.2e-186 656.8 457 69.1
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 3.6e-186 655.2 459 69.1
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 5.2e-185 651.4 452 69.0
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 6.8e-185 651.0 437 71.2
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 1.5e-184 649.8 400 75.5
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 2.6e-184 649.0 460 68.3
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.8e-184 647.9 454 71.6
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.2e-183 646.0 450 68.7
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 4.9e-183 644.8 428 70.8
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 3.2e-182 642.1 440 69.3
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 4.1e-182 641.7 460 67.4
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 1.6e-181 639.8 447 68.2
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 1.6e-181 639.8 428 70.3
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 1.6e-181 639.8 450 69.1
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 1.7e-180 636.3 421 71.3
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 3.9e-180 635.2 429 71.1
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.1e-179 633.6 450 67.1
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 2.1e-178 629.4 426 68.8
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 3.6e-178 628.6 442 67.6
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 8.1e-178 627.5 489 63.6
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 1.8e-177 626.3 446 67.5
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 5.2e-177 624.8 450 65.8
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 8.9e-177 624.0 456 65.8
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 2.6e-176 622.5 431 68.7
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 2.6e-176 622.5 431 68.2
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 3.4e-176 622.1 425 69.2
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 3.4e-176 622.1 425 69.2
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 9.9e-176 620.5 449 65.0
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 1.7e-175 619.8 396 74.0
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 3.8e-175 618.6 429 68.1
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 8.4e-175 617.5 425 68.9
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 8.4e-175 617.5 431 69.1
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 3.2e-174 615.5 456 64.3
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 4.1e-174 615.1 456 65.4
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 7.1e-174 614.4 450 64.7
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 7.1e-174 614.4 454 69.4
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.0e-172 610.5 451 65.0
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 3.9e-172 608.6 460 66.1
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.1e-171 607.1 427 67.7
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 5.6e-171 604.7 451 64.3
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 5.2e-169 598.2 435 65.1
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 4.4e-168 595.1 425 64.9
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 2.9e-167 592.4 430 67.7
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 4.2e-166 588.6 455 63.3
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-165 587.0 400 70.8
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.0e-164 583.9 429 64.1
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 1.5e-163 580.1 459 63.4
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 4.3e-163 578.6 424 62.7
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 1.1e-161 573.9 396 66.7
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 5.4e-158 561.6 459 61.9
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 2.7e-157 559.3 462 62.3
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 2.6e-152 542.7 431 62.4
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 7.9e-149 531.2 356 73.3
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.8e-148 530.0 406 62.8
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.6e-147 524.2 416 64.4
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 1.1e-145 520.8 452 58.6
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 7.6e-144 514.6 403 65.0
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 2.2e-143 513.1 420 57.4
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 2.2e-143 513.1 338 72.5
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 8.4e-143 511.1 402 62.2
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 4.2e-142 508.8 355 71.0
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 7.4e-139 498.0 381 65.9
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.6e-138 496.9 326 68.4
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 3.1e-137 492.7 426 55.9
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 3.4e-136 489.2 404 57.4
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 2.5e-134 483.0 448 53.1
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 4.5e-128 462.2 340 64.7
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 1.4e-124 450.7 339 64.3
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 4.8e-114 415.6 419 48.2
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 4.1e-105 386.0 226 78.8
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 5.5e-94 349.0 218 72.9
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 6.1e-85 318.9 236 66.9
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.1e-81 308.1 198 71.7
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 7.8e-72 275.4 239 59.8
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 2.9e-58 230.3 375 37.1
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.7e-55 218.8 130 80.0
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.7e-55 218.8 130 80.0
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 7.8e-48 195.7 170 57.6
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 4.0e-44 183.3 400 33.8
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.1e-38 165.2 159 54.1
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-35 155.2 170 52.9
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-35 155.2 170 52.9
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 2.2e-34 151.0 133 55.6
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 2.3e-31 141.0 70 92.9
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 4.0e-28 130.2 99 62.6
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 3.9e-23 113.6 76 69.7
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 1.4e-20 105.1 63 71.4
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 4.2e-17 93.6 205 32.7
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 5.5e-17 93.2 197 32.5
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 5.1e-15 86.7 229 29.3
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 1.8e-12 78.2 259 25.9
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 3.1e-12 77.4 75 48.0
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.1e-06 58.9 77 39.0


User provided reference genes

Program Settings