Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G287300 Prunus persica HOM05D001576 ORTHO05D000401 1.6e-135 486.1 244 100.0
Hma1.2p1_0921F.1_g236870 Hydrangea macrophylla HOM05D001576 ORTHO05D010219 5.6e-16 89.0 264 26.5
CSS0034959 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.3e-14 83.6 131 37.4
CSS0008814 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-14 82.0 131 36.6
CSS0008946 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-14 82.0 131 36.6
CSS0023642 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-14 82.0 131 36.6
CSS0041053 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.8e-14 82.0 131 36.6
CSS0011061 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 8.9e-14 81.6 127 34.6
CSS0004599 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.4e-13 79.3 131 35.9
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.3e-12 77.8 122 34.4
CSS0010296 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-12 77.0 113 38.1
QL02p093127 Quercus lobata HOM05D001576 ORTHO05D000401 2.2e-12 77.0 122 33.6
CSS0012194 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.9e-12 76.6 113 38.1
CSS0049636 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.9e-12 76.6 131 35.1
CSS0001664 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.7e-12 76.3 131 35.1
CSS0002566 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.4e-12 75.5 113 37.2
CSS0006860 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-11 74.7 112 37.5
CSS0010386 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-11 74.7 113 37.2
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.1e-11 74.7 127 33.1
Ciclev10017471m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.1e-11 74.7 122 33.6
CiPaw.07G184900 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.1e-11 72.8 116 35.3
CSS0033894 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-10 71.2 113 36.3
CSS0041981 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.2e-10 71.2 113 36.3
CSS0004943 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.7e-10 70.1 130 33.1
TWI53G1133 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 4.6e-10 69.3 124 33.9
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-10 68.9 125 32.8
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-10 68.9 125 32.8
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-10 68.9 125 32.8
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 6.0e-10 68.9 125 32.8
CiPaw.16G006000 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.8e-10 68.6 126 31.7
TWI23G0007 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.0e-09 68.2 124 32.3
CiPaw.09G130900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.7e-09 67.4 126 32.5
MD17G1218600 Malus domestica HOM05D001576 ORTHO05D000401 1.7e-09 67.4 124 31.5
TWI34G0641 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.7e-09 67.4 124 32.3
CSS0006547 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.3e-09 67.0 130 30.0
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-09 66.6 124 34.7
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-09 66.6 124 34.7
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-09 66.6 124 34.7
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-09 66.6 124 34.7
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-09 66.6 124 34.7
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-09 66.6 124 34.7
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-09 66.6 124 34.7
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-09 66.6 124 34.7
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.0e-09 66.6 124 34.7
Carub.0006s1187 Capsella rubella HOM05D000589 ORTHO05D000401 3.0e-09 66.6 128 32.0
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.0e-09 66.6 126 31.7
TWI09G0456 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 3.0e-09 66.6 124 30.6
FvH4_1g29461 Fragaria vesca HOM05D007743 ORTHO05D010219 3.9e-09 66.2 128 33.6
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 5.1e-09 65.9 124 34.7
Carub.0336s0001 Capsella rubella HOM05D000589 ORTHO05D000401 5.1e-09 65.9 128 31.2
Haze_20229 Corylus avellana HOM05D001576 ORTHO05D000401 5.1e-09 65.9 136 31.6
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 6.6e-09 65.5 131 31.3
QL02p046053 Quercus lobata HOM05D001576 ORTHO05D000131 6.6e-09 65.5 124 32.3
DCAR_030203 Daucus carota HOM05D001576 ORTHO05D000401 8.6e-09 65.1 260 24.6
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 8.6e-09 65.1 130 32.3
QL02p057958 Quercus lobata HOM05D001576 ORTHO05D000401 8.6e-09 65.1 122 31.1
Rhsim01G0133600 Rhododendron simsii HOM05D001576 ORTHO05D010219 8.6e-09 65.1 144 28.5
TWI38G0149 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 8.6e-09 65.1 126 31.0
TWI75G0594 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 8.6e-09 65.1 122 33.6
Aqoxy1G02949 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 1.1e-08 64.7 126 31.0
Haze_17766 Corylus avellana HOM05D001576 ORTHO05D000401 1.1e-08 64.7 138 30.4
TWI23G0178 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.1e-08 64.7 127 29.9
TWI56G0559 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.1e-08 64.7 127 29.9
TWI56G0638 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.1e-08 64.7 127 29.9
FvH4_2g00671 Fragaria vesca HOM05D007743 ORTHO05D004645 1.5e-08 64.3 127 31.5
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.5e-08 64.3 142 32.4
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.5e-08 64.3 142 32.4
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.5e-08 64.3 124 30.6
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.5e-08 64.3 124 30.6
CSS0031528 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.9e-08 63.9 134 29.1
CiPaw.03G181800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.9e-08 63.9 213 27.7
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 1.9e-08 63.9 128 31.2
Atru.chr1.3225 Acer truncatum HOM05D001576 ORTHO05D010219 2.5e-08 63.5 99 29.3
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 2.5e-08 63.5 128 31.2
Aqoxy3G02110 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 3.3e-08 63.2 127 30.7
Aqoxy6G02363 Aquilegia oxysepala HOM05D001576 ORTHO05D000401 3.3e-08 63.2 127 29.9
CSS0014176 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D010219 3.3e-08 63.2 126 29.4
CSS0032344 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 3.3e-08 63.2 151 31.8
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.3e-08 62.8 142 31.7
TWI34G0394 Tripterygium wilfordii HOM05D014549 ORTHO05D000401 4.3e-08 62.8 128 30.5
CiPaw.01G121200 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.6e-08 62.4 121 33.9
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.6e-08 62.4 217 24.9
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.6e-08 62.4 126 32.5
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 5.6e-08 62.4 143 32.2
CiPaw.10G139700 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.3e-08 62.0 190 30.5
CiPaw.10G155100 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.3e-08 62.0 126 31.7
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.3e-08 62.0 287 24.7
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 7.3e-08 62.0 142 31.7
Rhsim09G0056800 Rhododendron simsii HOM05D001576 ORTHO05D010219 9.5e-08 61.6 196 26.5
TWI23G0314 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 9.5e-08 61.6 121 33.1
CSS0013406 Camellia sinensis var. sinensis HOM05D007743 ORTHO05D004645 1.2e-07 61.2 162 30.2
CiPaw.09G088900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.2e-07 61.2 126 33.3
TWI38G2218 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.2e-07 61.2 113 34.5
TWI74G1447 Tripterygium wilfordii HOM05D014549 ORTHO05D005194 1.2e-07 61.2 127 28.3
BcaC01g01358 Brassica carinata HOM05D000589 ORTHO05D000401 1.6e-07 60.8 117 33.3
CiPaw.10G067400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-07 60.8 125 33.6
FAN26G1586 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.6e-07 60.8 142 31.7
Rhsim01G0159900 Rhododendron simsii HOM05D001576 ORTHO05D010219 1.6e-07 60.8 122 29.5
TWI31G0938 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.6e-07 60.8 122 31.1
C09p61020 Brassica napus HOM05D000589 ORTHO05D000401 2.1e-07 60.5 117 28.2
BolC7t44420H Brassica oleracea HOM05D000589 ORTHO05D000401 2.1e-07 60.5 127 27.6
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 2.1e-07 60.5 124 31.5
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 2.1e-07 60.5 124 31.5
CiPaw.10G028800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.8e-07 60.1 125 32.8
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 2.8e-07 60.1 124 29.0
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.8e-07 60.1 121 31.4
CSS0047725 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.6e-07 59.7 126 28.6
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-07 59.7 124 30.6
CiPaw.03G175800 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-07 59.7 123 31.7
CiPaw.05G236500 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-07 59.7 190 30.0
CiPaw.06G165900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-07 59.7 124 32.3
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-07 59.7 124 30.6
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-07 59.7 124 30.6
CiPaw.16G070300 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.6e-07 59.7 122 32.0
CiPaw.01G033500 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-07 59.3 125 32.8
CiPaw.01G110200 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-07 59.3 125 32.8
CiPaw.05G086200 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-07 59.3 125 32.8
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-07 59.3 124 30.6
CiPaw.09G014300 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-07 59.3 190 30.0
CiPaw.06G026600 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.2e-07 58.9 126 32.5
CiPaw.13G129900 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.2e-07 58.9 123 30.9
CiPaw.14G077500 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.2e-07 58.9 113 29.2
CiPaw.14G134600 Carya illinoinensis HOM05D001576 ORTHO05D000401 6.2e-07 58.9 190 30.0
CiPaw.08G115400 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.1e-07 58.5 124 32.3
CiPaw.09G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.1e-07 58.5 123 32.5
CiPaw.14G032000 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.1e-07 58.5 123 32.5
CiPaw.01G283500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 123 31.7
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 123 31.7
CiPaw.03G043000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 123 29.3
CiPaw.07G048000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 123 31.7
CiPaw.07G052000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 123 29.3
CiPaw.08G044500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 123 29.3
CiPaw.10G012800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 123 29.3
CiPaw.11G197100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 123 31.7
CiPaw.14G029000 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 123 31.7
CiPaw.14G108500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.1e-06 58.2 123 31.7
Rhsim01G0124200 Rhododendron simsii HOM05D000422 ORTHO05D004645 1.1e-06 58.2 118 30.5
BolC4t26616H Brassica oleracea HOM05D000589 ORTHO05D000401 1.4e-06 57.8 130 28.5
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-06 57.8 92 37.0
CiPaw.01G075100 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-06 57.8 123 31.7
CiPaw.03G069900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-06 57.8 201 28.9
CiPaw.09G174900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-06 57.8 259 23.6
FvH4_3g31921 Fragaria vesca HOM05D001576 ORTHO05D000401 1.4e-06 57.8 272 22.4
QL03p006855 Quercus lobata HOM05D001576 ORTHO05D000401 1.4e-06 57.8 132 28.0
QL03p071586 Quercus lobata HOM05D001576 ORTHO05D000401 1.4e-06 57.8 130 29.2
QL06p039590 Quercus lobata HOM05D001576 ORTHO05D000401 1.4e-06 57.8 132 28.0
BolC8t52393H Brassica oleracea HOM05D000589 ORTHO05D000401 1.8e-06 57.4 183 27.3
CiPaw.02G131900 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-06 57.4 125 32.0
CiPaw.13G033200 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-06 57.4 125 32.0
CiPaw.13G160200 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-06 57.4 125 32.0
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.8e-06 57.4 124 33.1
Haze_16101 Corylus avellana HOM05D001576 ORTHO05D000401 1.8e-06 57.4 128 30.5
Manes.13G090650 Manihot esculenta HOM05D007592 ORTHO05D004645 1.8e-06 57.4 127 30.7
Prupe.4G233800 Prunus persica HOM05D004516 ORTHO05D005194 1.8e-06 57.4 130 28.5
QL10p048988 Quercus lobata HOM05D001576 ORTHO05D000401 1.8e-06 57.4 128 28.9
Rhsim08G0115200 Rhododendron simsii HOM05D007743 ORTHO05D004645 1.8e-06 57.4 246 24.4
CSS0035632 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-06 57.0 117 29.9
CiPaw.14G031000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.4e-06 57.0 123 31.7
CANSAT25G1186 Cannabis sativa HOM05D007592 ORTHO05D004645 3.1e-06 56.6 181 25.4
CiPaw.03G088100 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.1e-06 56.6 175 27.4
CiPaw.14G032300 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.1e-06 56.6 123 30.9
Manes.04G041320 Manihot esculenta HOM05D007592 ORTHO05D004645 3.1e-06 56.6 127 32.3
vmacro07382 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 3.1e-06 56.6 133 29.3
CiPaw.01G146900 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.0e-06 56.2 123 29.3
CiPaw.03G152100 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.0e-06 56.2 125 31.2
CiPaw.06G027900 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.0e-06 56.2 126 31.7
CiPaw.11G164500 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.0e-06 56.2 209 26.3
FAN04G2392 Fragaria x ananassa HOM05D007743 ORTHO05D004645 4.0e-06 56.2 123 32.5
CiPaw.01G092600 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.2e-06 55.8 123 30.9
CiPaw.07G108700 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.2e-06 55.8 113 32.7
CiPaw.07G147000 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.2e-06 55.8 199 29.1
BolC2t06323H Brassica oleracea HOM05D000589 ORTHO05D000401 6.8e-06 55.5 129 27.1
CANSAT35G0055 Cannabis sativa HOM05D007592 ORTHO05D004645 6.8e-06 55.5 253 25.3
Dinv07939 Davidia involucrata HOM05D001576 ORTHO05D000401 6.8e-06 55.5 86 36.0
TWI38G0936 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 6.8e-06 55.5 133 30.8
BolC6t38535H Brassica oleracea HOM05D000589 ORTHO05D000401 8.9e-06 55.1 136 27.9
CiPaw.02G091600 Carya illinoinensis HOM05D001576 ORTHO05D000401 8.9e-06 55.1 123 28.5
Manes.12G071166 Manihot esculenta HOM05D007743 ORTHO05D010219 8.9e-06 55.1 127 32.3
QL06p053821 Quercus lobata HOM05D001576 ORTHO05D000401 8.9e-06 55.1 123 28.5


User provided reference genes

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