Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G282300 Prunus persica HOM05D008163 ORTHO05D010305 9.3e-56 219.9 108 100.0
Prupe.7G030100 Prunus persica HOM05D008163 ORTHO05D010305 1.9e-53 212.2 108 96.3
MD12G1044600 Malus domestica HOM05D008163 ORTHO05D010305 4.8e-44 181.0 111 81.1
MD15G1374400 Malus domestica HOM05D008163 ORTHO05D010305 4.8e-44 181.0 111 81.1
Hma1.2p1_0136F.1_g062003 Hydrangea macrophylla HOM05D008163 ORTHO05D010305 1.2e-39 166.4 108 77.8
Potri.007G072900 Populus trichocarpa HOM05D008163 ORTHO05D010305 7.4e-37 157.1 110 70.9
Sabra07G0061500 Salix brachista HOM05D008163 ORTHO05D010305 2.2e-36 155.6 110 70.9
Sabra15G0022500 Salix brachista HOM05D008163 ORTHO05D010305 3.7e-36 154.8 110 70.0
RcHm_v2.0_Chr1g0321141 Rosa chinensis HOM05D008163 ORTHO05D010305 1.4e-35 152.9 108 75.0
SalBow1G5351 Salvia bowleyana HOM05D008163 ORTHO05D010305 1.8e-35 152.5 102 77.5
SalBow1G7817 Salvia bowleyana HOM05D008163 ORTHO05D010305 1.8e-35 152.5 102 77.5
FAN03G0237 Fragaria x ananassa HOM05D008163 ORTHO05D010305 2.0e-34 149.1 108 72.2
FAN06G4466 Fragaria x ananassa HOM05D008163 ORTHO05D010305 3.4e-34 148.3 108 72.2
AL3G36570 Arabidopsis lyrata HOM05D008163 ORTHO05D010305 5.9e-34 147.5 104 67.3
AT3G22300 Arabidopsis thaliana HOM05D008163 ORTHO05D010305 1.0e-33 146.7 104 67.3
Carub.0003s2247 Capsella rubella HOM05D008163 ORTHO05D010305 1.0e-33 146.7 102 68.6
Solyc11g063600.3 Solanum lycopersicum HOM05D008163 ORTHO05D010305 1.0e-33 146.7 108 72.2
CARHR098200 Cardamine hirsuta HOM05D008163 ORTHO05D010305 1.3e-33 146.4 102 69.6
FvH4_7g02510 Fragaria vesca HOM05D008163 ORTHO05D010305 1.3e-33 146.4 108 71.3
Thhalv10021368m.g Eutrema salsugineum HOM05D008163 ORTHO05D010305 5.0e-33 144.4 104 65.4
Aa31LG8G8870 Aethionema arabicum HOM05D008163 ORTHO05D010305 1.1e-32 143.3 98 67.3
BcaC01g03452 Brassica carinata HOM05D008163 ORTHO05D010305 1.4e-32 142.9 104 65.4
C03p52430 Brassica napus HOM05D008163 ORTHO05D010305 1.4e-32 142.9 104 65.4
BolC3t17513H Brassica oleracea HOM05D008163 ORTHO05D010305 1.4e-32 142.9 104 65.4
HanXRQChr07g0196921 Helianthus annuus HOM05D003855 ORTHO05D004722 1.4e-32 142.9 107 65.4
Sp3g20090 Schrenkiella parvula HOM05D008163 ORTHO05D010305 1.9e-32 142.5 98 69.4
A03p42710 Brassica napus HOM05D008163 ORTHO05D010305 2.5e-32 142.1 104 65.4
BraA03t13418Z Brassica rapa HOM05D008163 ORTHO05D010305 4.2e-32 141.4 98 69.4
RcHm_v2.0_Chr2g0149911 Rosa chinensis HOM05D008163 ORTHO05D010305 4.2e-32 141.4 107 71.0
BcaB06g26334 Brassica carinata HOM05D008163 ORTHO05D010305 1.2e-31 139.8 98 68.4
A05p26470 Brassica napus HOM05D008163 ORTHO05D010305 1.2e-31 139.8 98 68.4
BraA05t21520Z Brassica rapa HOM05D008163 ORTHO05D010305 1.2e-31 139.8 98 68.4
BcaC05g28083 Brassica carinata HOM05D008163 ORTHO05D010305 1.6e-31 139.4 104 64.4
C05p41060 Brassica napus HOM05D008163 ORTHO05D010305 1.6e-31 139.4 104 64.4
BolC5t32848H Brassica oleracea HOM05D008163 ORTHO05D010305 1.6e-31 139.4 104 64.4
Prupe.7G029400 Prunus persica HOM05D008163 ORTHO05D010305 6.1e-31 137.5 82 85.4
ECA238G1787 Erigeron canadensis HOM05D003855 ORTHO05D004722 3.9e-30 134.8 107 63.6
SHI03043 Sapria himalayana HOM05D008163 ORTHO05D010305 8.8e-30 133.7 106 62.3
Manes.09G036100 Manihot esculenta HOM05D008163 ORTHO05D010305 5.7e-29 131.0 98 68.4
Os12g0517200 Oryza sativa ssp. japonica HOM05D008163 ORTHO05D010305 1.7e-28 129.4 108 62.0
Actinidia29350 Actinidia chinensis HOM05D008163 ORTHO05D010305 2.8e-28 128.6 87 72.4
Zm00001eb215210 Zea mays HOM05D008163 ORTHO05D010305 1.4e-27 126.3 105 61.9
CSS0047821 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 1.8e-27 125.9 87 73.6
Nn1g09991 Nelumbo nucifera HOM05D008163 ORTHO05D010305 6.9e-27 124.0 82 76.8
Nn1g10091 Nelumbo nucifera HOM05D008163 ORTHO05D010305 6.9e-27 124.0 82 76.8
Zm00001eb056700 Zea mays HOM05D008163 ORTHO05D010305 1.2e-26 123.2 105 61.0
CSS0033547 Camellia sinensis var. sinensis HOM05D008163 ORTHO05D010305 2.0e-26 122.5 87 72.4
Hund21444 Selenicereus undatus HOM05D008163 ORTHO05D010305 2.0e-26 122.5 103 61.2
TPR.G20554 Trifolium pratense HOM05D008163 ORTHO05D010305 4.5e-26 121.3 84 75.0
Lalb_Chr00c21g0405831 Lupinus albus HOM05D008163 ORTHO05D010305 1.9e-24 115.9 82 74.4
AUR62012772 Chenopodium quinoa HOM05D008163 ORTHO05D010305 2.5e-24 115.5 103 60.2
AUR62021886 Chenopodium quinoa HOM05D008163 ORTHO05D010305 3.2e-24 115.2 103 59.2
EL10Ac8g20156 Beta vulgaris HOM05D008163 ORTHO05D010305 2.7e-23 112.1 90 62.2
Rhsim06G0223600 Rhododendron simsii HOM05D000504 ORTHO05D000403 3.6e-23 111.7 74 73.0
DCAR_027582 Daucus carota HOM05D008163 ORTHO05D010305 4.7e-23 111.3 101 54.5
Nitab4.5_0000161g0030 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.0e-22 110.2 86 65.1
Nitab4.5_0001127g0310 Nicotiana tabacum HOM05D008163 ORTHO05D010305 3.9e-22 108.2 98 61.2
AUR62036216 Chenopodium quinoa HOM05D008163 ORTHO05D010305 5.1e-22 107.8 103 56.3
Nitab4.5_0000592g0150 Nicotiana tabacum HOM05D008163 ORTHO05D010305 1.1e-21 106.7 79 69.6
PSO017G7110 Papaver somniferum HOM05D008163 ORTHO05D010305 1.5e-21 106.3 76 69.7
PSO170G4613 Papaver somniferum HOM05D008163 ORTHO05D010305 1.5e-21 106.3 76 69.7
Nitab4.5_0000172g1360 Nicotiana tabacum HOM05D008163 ORTHO05D010305 7.4e-21 104.0 77 68.8
SEGI_07019 Sequoiadendron giganteum HOM05D008163 ORTHO05D010305 1.7e-20 102.8 100 52.0
Ah.14g087810 Amaranthus hybridus HOM05D000967 ORTHO05D000796 1.1e-19 100.1 103 50.5
MD07G1062900 Malus domestica HOM05D008163 ORTHO05D010305 1.5e-18 96.3 74 66.2
Glyma.17G185500 Glycine max HOM05D008163 ORTHO05D010305 9.4e-16 87.0 67 67.2
FAN10G0940 Fragaria x ananassa HOM05D008163 ORTHO05D010305 7.4e-13 77.4 53 73.6
Nitab4.5_0001702g0010 Nicotiana tabacum HOM05D011509 ORTHO05D010305 1.3e-12 76.6 52 73.1
Pp3c3_3090 Physcomitrium patens HOM05D008163 ORTHO05D010305 1.7e-12 76.3 104 35.6
AagrBONN_evm.TU.Sc2ySwM_368.972 Anthoceros agrestis HOM05D008163 ORTHO05D010305 2.8e-12 75.5 100 41.0
SMO196G0141 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 8.5e-09 63.9 76 42.1
SMO234G0032 Selaginella moellendorffii HOM05D008163 ORTHO05D010305 8.5e-09 63.9 76 42.1
Nitab4.5_0004300g0280 Nicotiana tabacum HOM05D003467 ORTHO05D004220 5.5e-08 61.2 43 72.1


User provided reference genes

Program Settings