Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G279900 Prunus persica HOM05D008049 ORTHO05D010198 9.8e-148 526.9 298 100.0
MD15G1137300 Malus domestica HOM05D008049 ORTHO05D010198 2.3e-104 382.9 303 72.3
QL10p040433 Quercus lobata HOM05D008049 ORTHO05D010198 2.3e-88 329.7 319 63.9
RcHm_v2.0_Chr2g0123171 Rosa chinensis HOM05D008049 ORTHO05D010198 6.9e-85 318.2 312 62.8
CiPaw.03G116500 Carya illinoinensis HOM05D008049 ORTHO05D010198 3.8e-83 312.4 314 61.5
Dinv30334 Davidia involucrata HOM05D008049 ORTHO05D010198 1.4e-82 310.5 320 61.2
Cpa.g.sc37.30 Carica papaya HOM05D008049 ORTHO05D010198 3.6e-81 305.8 307 57.7
Atru.chr4.1095 Acer truncatum HOM05D008049 ORTHO05D010198 1.3e-78 297.4 305 59.7
Atru.chr4.1100 Acer truncatum HOM05D008049 ORTHO05D010198 1.3e-78 297.4 305 59.7
TWI31G1063 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 3.7e-78 295.8 316 60.4
FvH4_1g25250 Fragaria vesca HOM05D008049 ORTHO05D010198 6.3e-78 295.0 302 64.2
Ciclev10002216m.g Citrus clementina HOM05D008049 ORTHO05D010198 2.4e-77 293.1 299 58.9
TWI79G0517 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 2.4e-77 293.1 313 61.0
FAN26G0656 Fragaria x ananassa HOM05D008049 ORTHO05D010198 6.9e-77 291.6 299 62.9
FAN26G2415 Fragaria x ananassa HOM05D008049 ORTHO05D010198 6.9e-77 291.6 299 62.9
TAR381G0470 Trochodendron aralioides HOM05D008049 ORTHO05D010198 1.0e-75 287.7 314 57.6
FAN19G2909 Fragaria x ananassa HOM05D008049 ORTHO05D010198 6.5e-75 285.0 300 63.3
PGR102G0265 Punica granatum HOM05D008049 ORTHO05D010198 6.7e-72 275.0 304 57.6
Actinidia16520 Actinidia chinensis HOM05D008049 ORTHO05D010198 1.1e-71 274.2 329 57.1
Hma1.2p1_0134F.1_g061550 Hydrangea macrophylla HOM05D008049 ORTHO05D010198 1.5e-71 273.9 313 56.9
Potri.005G069900 Populus trichocarpa HOM05D008049 ORTHO05D010198 2.2e-70 270.0 314 52.9
THA.LOC104818414 Tarenaya hassleriana HOM05D008049 ORTHO05D010198 1.4e-69 267.3 306 52.6
Medtr3g096940 Medicago truncatula HOM05D008049 ORTHO05D010198 1.8e-69 266.9 306 58.8
Sp6g34110 Schrenkiella parvula HOM05D008049 ORTHO05D010198 9.1e-69 264.6 312 50.0
PSO528G0188 Papaver somniferum HOM05D008049 ORTHO05D010198 1.5e-68 263.8 239 60.7
Thhalv10014201m.g Eutrema salsugineum HOM05D008049 ORTHO05D010198 3.4e-68 262.7 314 51.0
AL6G19520 Arabidopsis lyrata HOM05D008049 ORTHO05D010198 5.9e-68 261.9 313 51.1
CARHR204240 Cardamine hirsuta HOM05D008049 ORTHO05D010198 1.0e-67 261.2 314 49.4
Carub.0006s0774 Capsella rubella HOM05D008049 ORTHO05D010198 3.8e-67 259.2 315 49.5
AT5G08770 Arabidopsis thaliana HOM05D008049 ORTHO05D010198 8.5e-67 258.1 308 51.0
PSO170G0957 Papaver somniferum HOM05D008049 ORTHO05D010198 1.1e-66 257.7 237 67.5
Aa31LG3G17800 Aethionema arabicum HOM05D008049 ORTHO05D010198 5.5e-66 255.4 313 49.2
C09p68210 Brassica napus HOM05D008049 ORTHO05D010198 7.2e-66 255.0 312 50.0
Lj1g0009929 Lotus japonicus HOM05D008049 ORTHO05D010198 1.2e-65 254.2 316 54.1
Thecc.01G140900 Theobroma cacao HOM05D008049 ORTHO05D010198 1.2e-65 254.2 252 64.7
Duzib147G0405 Durio zibethinus HOM05D008049 ORTHO05D010198 4.7e-65 252.3 315 56.5
A10p28010 Brassica napus HOM05D008049 ORTHO05D010198 1.4e-64 250.8 312 48.4
Glyma.06G157600 Glycine max HOM05D008049 ORTHO05D010198 1.8e-64 250.4 300 56.3
BcaB08g37227 Brassica carinata HOM05D008049 ORTHO05D010198 2.3e-64 250.0 317 51.7
BolC9t59570H Brassica oleracea HOM05D008049 ORTHO05D010198 3.9e-64 249.2 312 49.0
BraA10t44851Z Brassica rapa HOM05D008049 ORTHO05D010198 3.9e-64 249.2 312 47.8
Duzib187G0110 Durio zibethinus HOM05D008049 ORTHO05D010198 1.5e-63 247.3 303 56.1
Gorai.012G037400 Gossypium raimondii HOM05D008049 ORTHO05D010198 6.3e-62 241.9 258 62.8
Glyma.04G208100 Glycine max HOM05D008049 ORTHO05D010198 1.8e-61 240.4 308 50.0
Phvul.009G152600 Phaseolus vulgaris HOM05D008049 ORTHO05D010198 1.2e-60 237.7 305 50.8
arahy.Tifrunner.gnm1.ann1.WZNZ1Z Arachis hypogaea HOM05D008049 ORTHO05D010198 2.0e-60 236.9 324 51.5
DCAR_013179 Daucus carota HOM05D008049 ORTHO05D010198 2.6e-60 236.5 308 46.8
arahy.Tifrunner.gnm1.ann1.M4SWJY Arachis hypogaea HOM05D008049 ORTHO05D010198 3.5e-60 236.1 322 52.8
VMungo1309G0538 Vigna mungo HOM05D008049 ORTHO05D010198 5.9e-60 235.3 302 57.3
Nn5g28352 Nelumbo nucifera HOM05D008049 ORTHO05D010198 3.8e-59 232.6 302 49.3
Sc09g0002140 Simmondsia chinensis HOM05D008049 ORTHO05D010198 1.8e-56 223.8 340 47.9
Migut.H00830 Erythranthe guttata HOM05D008049 ORTHO05D010198 2.2e-54 216.9 316 50.9
Lalb_Chr08g0238031 Lupinus albus HOM05D008049 ORTHO05D010198 1.7e-51 207.2 227 59.0
COL.COLO4_12107 Corchorus olitorius HOM05D008049 ORTHO05D010198 1.2e-47 194.5 162 62.3
MD15G1137000 Malus domestica HOM05D008049 ORTHO05D010198 2.6e-47 193.4 153 68.6
unitig_899.g15147 Utricularia gibba HOM05D008049 ORTHO05D010198 5.5e-42 175.6 218 47.7
EL10Ac4g09675 Beta vulgaris HOM05D008049 ORTHO05D010198 9.5e-42 174.9 275 46.2
Gohir.A05G382200 Gossypium hirsutum HOM05D008049 ORTHO05D010198 5.2e-40 169.1 253 42.7
Gohir.D04G033000 Gossypium hirsutum HOM05D008049 ORTHO05D010198 1.5e-39 167.5 253 42.3
AUR62006889 Chenopodium quinoa HOM05D008049 ORTHO05D010198 3.1e-37 159.8 169 56.2
Sabra05G0056900 Salix brachista HOM05D008049 ORTHO05D010198 2.8e-33 146.7 121 62.0
CDE04G3132 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 4.1e-29 132.9 293 35.5
CDE07G0304 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 2.5e-26 123.6 285 34.4
Psat5g058560 Pisum sativum HOM05D008049 ORTHO05D010198 6.2e-25 119.0 95 68.4
TPR.G7867 Trifolium pratense HOM05D008049 ORTHO05D010198 2.3e-24 117.1 176 53.4
Nitab4.5_0000905g0120 Nicotiana tabacum HOM05D008049 ORTHO05D010198 5.2e-24 115.9 173 46.2
MBI06_g26010_MAGBIO Magnolia biondii HOM05D008049 ORTHO05D010198 9.8e-23 111.7 170 44.7
SGA_v2.0_scaffold20G08957 Striga asiatica HOM05D008049 ORTHO05D010198 1.2e-20 104.8 126 46.0
AUR62000540 Chenopodium quinoa HOM05D008049 ORTHO05D010198 7.8e-20 102.1 98 60.2
Ca_16998_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 2.3e-11 73.9 54 75.9
Ca_17026_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 2.3e-11 73.9 54 75.9
arahy.Tifrunner.gnm1.ann1.P087XE Arachis hypogaea HOM05D008049 ORTHO05D010198 2.0e-07 60.8 37 81.1
Peaxi162Scf00925g00015 Petunia axillaris HOM05D008049 ORTHO05D010198 3.4e-07 60.1 92 40.2


User provided reference genes

Program Settings