Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G278700 Prunus persica HOM05D002165 ORTHO05D001531 2.3e-44 181.8 89 100.0
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 5.9e-24 114.0 87 71.3
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.3e-23 112.8 87 70.1
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.3e-23 112.8 87 70.1
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 3.8e-23 111.3 87 70.1
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.8e-23 111.3 87 70.1
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 3.6e-21 104.8 87 67.8
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 1.0e-20 103.2 88 65.9
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 3.0e-20 101.7 87 64.4
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 3.0e-20 101.7 82 69.5
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 1.2e-19 99.8 85 63.5
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 6.8e-12 73.9 88 51.1
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 1.2e-11 73.2 86 52.3
Migut.B00883 Erythranthe guttata HOM05D002165 ORTHO05D001531 1.2e-11 73.2 77 54.5
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.2e-11 73.2 87 49.4
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.0e-11 72.4 88 50.0
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 5.7e-11 70.9 79 48.1
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 7.5e-11 70.5 88 50.0
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.2e-10 68.9 88 47.7
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.8e-10 68.6 89 50.6
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.8e-10 68.6 89 50.6
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.8e-10 68.6 89 50.6
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 3.7e-10 68.2 78 50.0
DCAR_001886 Daucus carota HOM05D002165 ORTHO05D001531 4.9e-10 67.8 79 46.8
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 6.3e-10 67.4 82 48.8
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 8.3e-10 67.0 82 48.8
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 1.4e-09 66.2 88 45.5
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 1.8e-09 65.9 79 45.6
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.4e-09 65.5 87 46.0
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.4e-09 65.5 87 46.0
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.4e-09 65.5 87 46.0
Migut.N00975 Erythranthe guttata HOM05D002165 ORTHO05D001531 4.1e-09 64.7 76 52.6
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.1e-09 64.7 87 43.7
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.4e-09 64.3 87 44.8
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 7.0e-09 63.9 83 47.0
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 7.0e-09 63.9 87 44.8
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 9.2e-09 63.5 83 47.0
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.2e-08 63.2 87 44.8
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.6e-08 62.8 79 48.1
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.6e-08 62.8 79 48.1
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 2.0e-08 62.4 88 44.3
ClCG03G017890 Citrullus lanatus HOM05D002165 ORTHO05D001531 2.7e-08 62.0 85 45.9
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.5e-08 61.6 87 43.7
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.5e-08 61.6 87 43.7
Peaxi162Scf00194g00002 Petunia axillaris HOM05D002165 ORTHO05D001531 3.5e-08 61.6 69 47.8
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.5e-08 61.2 87 46.0
Manes.08G107400 Manihot esculenta HOM05D002165 ORTHO05D001531 7.8e-08 60.5 92 47.8
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 7.8e-08 60.5 84 45.2
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 1.3e-07 59.7 78 50.0
MELO3C004151.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.3e-07 59.7 80 46.2
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 1.3e-07 59.7 88 43.2
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 1.3e-07 59.7 88 43.2
DCAR_001884 Daucus carota HOM05D002165 ORTHO05D001531 1.7e-07 59.3 79 48.1
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.7e-07 59.3 91 41.8
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.7e-07 59.3 91 41.8
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 1.7e-07 59.3 83 43.4
Sed0002745 Sechium edule HOM05D002165 ORTHO05D001531 2.3e-07 58.9 80 42.5
Sed0018337 Sechium edule HOM05D002165 ORTHO05D001531 2.3e-07 58.9 80 41.2
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 2.3e-07 58.9 89 42.7
BcaB04g19717 Brassica carinata HOM05D002165 ORTHO05D001531 3.9e-07 58.2 87 44.8
CARHR186860 Cardamine hirsuta HOM05D002165 ORTHO05D001531 3.9e-07 58.2 87 43.7
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 3.9e-07 58.2 90 40.0
Nitab4.5_0000800g0060 Nicotiana tabacum HOM05D002165 ORTHO05D001531 3.9e-07 58.2 71 47.9
Nitab4.5_0003573g0030 Nicotiana tabacum HOM05D002165 ORTHO05D001531 3.9e-07 58.2 71 47.9
Nitab4.5_0003573g0040 Nicotiana tabacum HOM05D002165 ORTHO05D001531 3.9e-07 58.2 71 47.9
Nitab4.5_0005662g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 5.0e-07 57.8 67 47.8
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 5.0e-07 57.8 80 45.0
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 5.0e-07 57.8 83 44.6
BcaC03g17834 Brassica carinata HOM05D002165 ORTHO05D001531 6.6e-07 57.4 87 42.5
BcaNung06223 Brassica carinata HOM05D002165 ORTHO05D001531 6.6e-07 57.4 87 42.5
A02p39040 Brassica napus HOM05D002165 ORTHO05D001531 6.6e-07 57.4 87 42.5
C02p58650 Brassica napus HOM05D002165 ORTHO05D001531 6.6e-07 57.4 87 42.5
BolC2t11925H Brassica oleracea HOM05D002165 ORTHO05D001531 6.6e-07 57.4 87 42.5
BraA02t08873Z Brassica rapa HOM05D002165 ORTHO05D001531 6.6e-07 57.4 87 42.5
CsaV3_6G002630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 6.6e-07 57.4 88 43.2
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 8.6e-07 57.0 68 44.1
Gohir.D09G243000 Gossypium hirsutum HOM05D002165 ORTHO05D001531 8.6e-07 57.0 75 48.0
Gorai.006G266800 Gossypium raimondii HOM05D002165 ORTHO05D001531 8.6e-07 57.0 75 48.0
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 8.6e-07 57.0 89 44.9
Solyc01g101260.2 Solanum lycopersicum HOM05D002165 ORTHO05D001531 8.6e-07 57.0 65 46.2
Sopen01g044710 Solanum pennellii HOM05D002165 ORTHO05D001531 8.6e-07 57.0 65 46.2
BcaB07g29941 Brassica carinata HOM05D002165 ORTHO05D001531 1.1e-06 56.6 91 41.8
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 1.1e-06 56.6 87 42.5
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 1.1e-06 56.6 87 42.5
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 1.1e-06 56.6 87 42.5
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 1.1e-06 56.6 80 43.8
ClCG02G014640 Citrullus lanatus HOM05D002165 ORTHO05D001531 1.5e-06 56.2 80 43.8
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 1.5e-06 56.2 91 38.5
Gohir.A09G242300 Gossypium hirsutum HOM05D002165 ORTHO05D001531 1.5e-06 56.2 75 46.7
Oeu062782.1 Olea europaea HOM05D002165 ORTHO05D001531 1.5e-06 56.2 78 47.4
Carub.0006s2437 Capsella rubella HOM05D002165 ORTHO05D001531 1.9e-06 55.8 87 41.4
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.9e-06 55.8 88 44.3
Thhalv10005460m.g Eutrema salsugineum HOM05D002165 ORTHO05D001531 1.9e-06 55.8 87 41.4
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 1.9e-06 55.8 82 41.5
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 1.9e-06 55.8 80 41.2
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 1.9e-06 55.8 91 41.8
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 2.5e-06 55.5 87 41.4
AL3G16610 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 2.5e-06 55.5 90 42.2
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 2.5e-06 55.5 83 43.4
Nitab4.5_0002516g0010 Nicotiana tabacum HOM05D002165 ORTHO05D001531 2.5e-06 55.5 67 46.3
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 3.3e-06 55.1 87 41.4
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 3.3e-06 55.1 87 41.4
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 3.3e-06 55.1 87 41.4
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.3e-06 55.1 88 43.2
Eucgr.H01322 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.3e-06 55.1 83 41.0
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.3e-06 55.1 87 40.2
Eucgr.L03553 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.3e-06 55.1 83 41.0
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 3.3e-06 55.1 76 46.1
Sabra05G0014100 Salix brachista HOM05D002165 ORTHO05D001531 3.3e-06 55.1 86 39.5
Sed0027158 Sechium edule HOM05D002165 ORTHO05D001531 3.3e-06 55.1 88 40.9
AL6G38560 Arabidopsis lyrata HOM05D002165 ORTHO05D001531 4.3e-06 54.7 87 40.2
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 4.3e-06 54.7 82 42.7
Thecc.04G314700 Theobroma cacao HOM05D002165 ORTHO05D001531 4.3e-06 54.7 75 44.0
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 5.6e-06 54.3 88 42.0
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 5.6e-06 54.3 82 39.0
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 5.6e-06 54.3 82 40.2
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 7.3e-06 53.9 87 42.5
ECA240G1387 Erigeron canadensis HOM05D002165 ORTHO05D001531 7.3e-06 53.9 74 43.2
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 7.3e-06 53.9 91 38.5
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 7.3e-06 53.9 88 43.2
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 9.5e-06 53.5 84 41.7


User provided reference genes

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