Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G275300 Prunus persica HOM05D000192 ORTHO05D000123 5.1e-38 160.6 83 100.0
Prupe.8G175500 Prunus persica HOM05D000192 ORTHO05D000123 9.1e-19 96.7 109 55.0
Prupe.8G175100 Prunus persica HOM05D000192 ORTHO05D000123 1.3e-17 92.8 83 68.7
QL04p083844 Quercus lobata HOM05D000192 ORTHO05D000123 1.0e-09 66.6 110 43.6
Cpa.g.sc20.175 Carica papaya HOM05D000192 ORTHO05D000123 2.9e-09 65.1 103 43.7
QL02p095042 Quercus lobata HOM05D000192 ORTHO05D000123 8.5e-09 63.5 110 40.9
QL03p016713 Quercus lobata HOM05D000192 ORTHO05D000123 8.5e-09 63.5 110 40.9
GSVIVG01023928001 Vitis vinifera HOM05D000192 ORTHO05D000123 1.1e-08 63.2 98 46.9
QL02p094986 Quercus lobata HOM05D000192 ORTHO05D000123 3.2e-08 61.6 110 40.9
Potri.009G142400 Populus trichocarpa HOM05D000192 ORTHO05D000123 4.2e-08 61.2 108 40.7
QL02p095054 Quercus lobata HOM05D000192 ORTHO05D000123 4.2e-08 61.2 110 40.0
QL03p016719 Quercus lobata HOM05D000192 ORTHO05D000123 4.2e-08 61.2 110 40.0
QL04p083914 Quercus lobata HOM05D000192 ORTHO05D000123 4.2e-08 61.2 110 40.0
Potri.009G142600 Populus trichocarpa HOM05D000192 ORTHO05D000123 7.2e-08 60.5 108 40.7
QL03p016690 Quercus lobata HOM05D000192 ORTHO05D000123 7.2e-08 60.5 98 44.9
Prupe.8G131200 Prunus persica HOM05D000192 ORTHO05D000123 9.4e-08 60.1 50 70.0
QL02p095000 Quercus lobata HOM05D000192 ORTHO05D000123 9.4e-08 60.1 104 42.3
Cpa.g.sc320.3 Carica papaya HOM05D000192 ORTHO05D000123 1.2e-07 59.7 111 41.4
CiPaw.05G090400 Carya illinoinensis HOM05D000192 ORTHO05D000123 1.6e-07 59.3 108 42.6
Potri.004G182550 Populus trichocarpa HOM05D000192 ORTHO05D000123 2.1e-07 58.9 101 41.6
MD05G1130600 Malus domestica HOM05D000192 ORTHO05D000123 2.7e-07 58.5 97 50.5
Hma1.2p1_0271F.1_g109120 Hydrangea macrophylla HOM05D000192 ORTHO05D000123 4.7e-07 57.8 109 40.4
QL02p095033 Quercus lobata HOM05D000192 ORTHO05D000123 6.1e-07 57.4 98 43.9
GSVIVG01023923001 Vitis vinifera HOM05D000192 ORTHO05D000123 6.1e-07 57.4 110 40.9
Prupe.8G175000 Prunus persica HOM05D000192 ORTHO05D000123 8.0e-07 57.0 110 45.5
GSVIVG01023929001 Vitis vinifera HOM05D000192 ORTHO05D000123 1.0e-06 56.6 107 42.1
Cpa.g.sc320.4 Carica papaya HOM05D000192 ORTHO05D000123 3.0e-06 55.1 108 36.1
MD05G1131000 Malus domestica HOM05D000192 ORTHO05D000123 3.0e-06 55.1 98 48.0
CSS0019850 Camellia sinensis var. sinensis HOM05D000192 ORTHO05D000123 4.0e-06 54.7 111 37.8
Prupe.2G142900 Prunus persica HOM05D000192 ORTHO05D000123 4.0e-06 54.7 110 43.6
QL04p083834 Quercus lobata HOM05D000192 ORTHO05D000123 4.0e-06 54.7 110 40.0
CANSAT25G3696 Cannabis sativa HOM05D000192 ORTHO05D000123 5.2e-06 54.3 111 37.8
FAN15G2798 Fragaria x ananassa HOM05D000192 ORTHO05D000123 5.2e-06 54.3 100 46.0
Manes.11G106300 Manihot esculenta HOM05D000192 ORTHO05D000123 5.2e-06 54.3 110 40.0
Potri.004G182700 Populus trichocarpa HOM05D000192 ORTHO05D000123 5.2e-06 54.3 105 41.9
FAN24G0361 Fragaria x ananassa HOM05D000192 ORTHO05D000123 6.8e-06 53.9 97 48.5
Potri.009G142500 Populus trichocarpa HOM05D000192 ORTHO05D000123 6.8e-06 53.9 99 42.4
Prupe.8G175700 Prunus persica HOM05D000192 ORTHO05D000123 6.8e-06 53.9 106 50.0
RcHm_v2.0_Chr6g0280071 Rosa chinensis HOM05D000192 ORTHO05D000123 6.8e-06 53.9 100 47.0
CSS0041506 Camellia sinensis var. sinensis HOM05D000192 ORTHO05D000123 8.8e-06 53.5 108 38.0
Gohir.D01G164300 Gossypium hirsutum HOM05D000192 ORTHO05D000123 8.8e-06 53.5 107 37.4
Gohir.D01G164600 Gossypium hirsutum HOM05D000192 ORTHO05D000123 8.8e-06 53.5 107 37.4
Manes.11G106200 Manihot esculenta HOM05D000192 ORTHO05D000123 8.8e-06 53.5 110 40.0
QL02p095049 Quercus lobata HOM05D000192 ORTHO05D000123 8.8e-06 53.5 110 37.3
QL02p095087 Quercus lobata HOM05D000192 ORTHO05D000123 8.8e-06 53.5 110 37.3
Sabra04G0122900 Salix brachista HOM05D000192 ORTHO05D000123 8.8e-06 53.5 105 41.9
Sabra09G0110500 Salix brachista HOM05D000192 ORTHO05D000123 8.8e-06 53.5 99 42.4


User provided reference genes

Program Settings