Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G274600 Prunus persica HOM05D007879 ORTHO05D000440 3.0e-140 501.9 264 100.0
FvH4_2g24700 Fragaria vesca HOM05D007879 ORTHO05D000440 2.6e-35 153.3 304 34.9
FAN24G0183 Fragaria x ananassa HOM05D007879 ORTHO05D000440 5.8e-35 152.1 304 34.9
FAN15G1295 Fragaria x ananassa HOM05D007879 ORTHO05D000440 7.6e-35 151.8 303 35.0
Prupe.8G252000 Prunus persica HOM05D007879 ORTHO05D000440 2.1e-32 143.7 356 32.6
MD11G1297700 Malus domestica HOM05D007879 ORTHO05D000440 1.7e-31 140.6 339 33.9
QL07p015836 Quercus lobata HOM05D007879 ORTHO05D000440 1.5e-30 137.5 316 33.9
RcHm_v2.0_Chr6g0292521 Rosa chinensis HOM05D007879 ORTHO05D000440 1.5e-30 137.5 331 32.9
QL12p023875 Quercus lobata HOM05D007879 ORTHO05D000440 2.5e-30 136.7 316 33.9
Dinv32989 Davidia involucrata HOM05D007879 ORTHO05D000440 2.8e-29 133.3 316 33.5
Haze_04806 Corylus avellana HOM05D007879 ORTHO05D000440 1.4e-28 131.0 322 31.4
Manes.01G213200 Manihot esculenta HOM05D007879 ORTHO05D000440 2.0e-27 127.1 329 31.9
Cfa006049 Carpinus fangiana HOM05D007879 ORTHO05D000440 4.5e-27 125.9 322 31.4
Gorai.008G008000 Gossypium raimondii HOM05D007879 ORTHO05D000440 5.8e-27 125.6 192 41.1
Gohir.D12G008200 Gossypium hirsutum HOM05D007879 ORTHO05D000440 7.6e-27 125.2 192 41.1
Gohir.A12G008500 Gossypium hirsutum HOM05D007879 ORTHO05D000440 2.2e-26 123.6 192 39.6
TWI59G0016 Tripterygium wilfordii HOM05D007879 ORTHO05D000440 2.2e-26 123.6 307 32.2
TWI59G0406 Tripterygium wilfordii HOM05D007879 ORTHO05D000440 2.2e-26 123.6 307 32.2
Cfa006040 Carpinus fangiana HOM05D007879 ORTHO05D000440 1.9e-25 120.6 322 31.1
Haze_04807 Corylus avellana HOM05D007879 ORTHO05D000440 4.2e-25 119.4 322 30.7
Actinidia00702 Actinidia chinensis HOM05D007879 ORTHO05D000440 7.1e-25 118.6 328 31.7
Thecc.01G290000 Theobroma cacao HOM05D007879 ORTHO05D000440 3.0e-23 113.2 319 31.3
FvH4_2g24690 Fragaria vesca HOM05D007879 ORTHO05D000440 6.7e-23 112.1 207 37.2
FvH4_2g24391 Fragaria vesca HOM05D007879 ORTHO05D000440 1.1e-22 111.3 317 29.7
Rhsim13G0017600 Rhododendron simsii HOM05D007879 ORTHO05D000440 3.3e-22 109.8 317 30.0
FAN27G2132 Fragaria x ananassa HOM05D007879 ORTHO05D000440 2.1e-21 107.1 294 31.6
QL07p015844 Quercus lobata HOM05D007879 ORTHO05D000440 6.2e-21 105.5 317 29.3
Gorai.004G085100 Gossypium raimondii HOM05D007879 ORTHO05D000440 8.1e-21 105.1 318 28.3
Lj6g0010361 Lotus japonicus HOM05D007879 ORTHO05D000440 1.4e-20 104.4 313 28.8
FAN27G1010 Fragaria x ananassa HOM05D007879 ORTHO05D000440 5.3e-20 102.4 189 34.4
FvH4_2g24380 Fragaria vesca HOM05D007879 ORTHO05D000440 2.6e-19 100.1 313 27.2
Sopen09g029230 Solanum pennellii HOM05D007879 ORTHO05D000440 4.5e-19 99.4 322 28.0
Lalb_Chr20g0121241 Lupinus albus HOM05D007879 ORTHO05D000440 5.8e-19 99.0 304 28.9
arahy.Tifrunner.gnm1.ann1.J3G7Y5 Arachis hypogaea HOM05D007879 ORTHO05D000440 7.6e-19 98.6 316 29.7
PGSC0003DMG400016851 Solanum tuberosum HOM05D007879 ORTHO05D000440 2.9e-18 96.7 321 27.1
Gohir.D08G080050 Gossypium hirsutum HOM05D007879 ORTHO05D000440 3.8e-18 96.3 313 28.1
Solyc09g074390.3 Solanum lycopersicum HOM05D007879 ORTHO05D000440 6.5e-18 95.5 322 27.3
VMungo0540G1869 Vigna mungo HOM05D007879 ORTHO05D000440 8.4e-18 95.1 326 26.1
Glyma.15G081900 Glycine max HOM05D007879 ORTHO05D000440 1.1e-17 94.7 163 38.7
Glyma.13G230700 Glycine max HOM05D007879 ORTHO05D000440 3.2e-17 93.2 163 38.0
ECA247G0474 Erigeron canadensis HOM05D007879 ORTHO05D000440 4.2e-17 92.8 305 25.2
FvH4_2g24390 Fragaria vesca HOM05D007879 ORTHO05D000440 9.3e-17 91.7 312 26.0
QL93p0358_0007 Quercus lobata HOM05D007879 ORTHO05D000440 9.3e-17 91.7 267 30.0
arahy.Tifrunner.gnm1.ann1.AR7BJJ Arachis hypogaea HOM05D007879 ORTHO05D000440 1.2e-16 91.3 189 34.4
VMungo0540G0831 Vigna mungo HOM05D007879 ORTHO05D000440 1.2e-16 91.3 194 31.4
FvH4_2g24410 Fragaria vesca HOM05D007879 ORTHO05D000440 3.5e-16 89.7 295 28.8
Ciclev10021313m.g Citrus clementina HOM05D007879 ORTHO05D000440 6.0e-16 89.0 319 28.8
FAN20G2795 Fragaria x ananassa HOM05D007879 ORTHO05D000440 7.9e-16 88.6 131 45.0
Nitab4.5_0002011g0070 Nicotiana tabacum HOM05D007879 ORTHO05D000440 1.3e-15 87.8 314 26.4
HanXRQChr10g0281401 Helianthus annuus HOM05D007879 ORTHO05D000440 1.8e-15 87.4 301 24.9
Phvul.006G177000 Phaseolus vulgaris HOM05D007879 ORTHO05D000440 3.0e-15 86.7 310 24.5
PSO832G2385 Papaver somniferum HOM05D007879 ORTHO05D000440 6.7e-15 85.5 316 28.2
CAN.G426.14 Capsicum annuum HOM05D007879 ORTHO05D000440 1.5e-14 84.3 327 25.1
Cfa006043 Carpinus fangiana HOM05D007879 ORTHO05D000440 3.3e-14 83.2 272 25.7
FAN15G2055 Fragaria x ananassa HOM05D007879 ORTHO05D000440 4.3e-14 82.8 171 33.3
FAN15G3739 Fragaria x ananassa HOM05D007879 ORTHO05D000440 4.3e-14 82.8 171 33.3
Lsat_1_v5_gn_9_9700 Lactuca sativa HOM05D007879 ORTHO05D000440 4.3e-14 82.8 309 25.2
Glyma.15G081800 Glycine max HOM05D007879 ORTHO05D000440 5.7e-14 82.4 84 46.4
PSO210G5716 Papaver somniferum HOM05D007879 ORTHO05D000440 5.7e-14 82.4 319 27.6
QL12p023883 Quercus lobata HOM05D007879 ORTHO05D000440 7.4e-14 82.0 161 37.3
COL.COLO4_08033 Corchorus olitorius HOM05D000182 ORTHO05D000112 2.1e-13 80.5 214 29.4
Peaxi162Scf00067g00024 Petunia axillaris HOM05D007879 ORTHO05D000440 1.8e-12 77.4 309 25.2
Phvul.006G176940 Phaseolus vulgaris HOM05D007879 ORTHO05D000440 3.1e-12 76.6 305 25.6
Medtr2g015760 Medicago truncatula HOM05D007879 ORTHO05D000440 5.3e-12 75.9 290 25.9
CiPaw.08G100600 Carya illinoinensis HOM05D007879 ORTHO05D000440 1.5e-11 74.3 189 31.2
FAN15G1025 Fragaria x ananassa HOM05D007879 ORTHO05D000440 1.7e-10 70.9 206 29.1
FAN15G1476 Fragaria x ananassa HOM05D007879 ORTHO05D000440 1.7e-10 70.9 206 29.1
Nitab4.5_0003563g0060 Nicotiana tabacum HOM05D007879 ORTHO05D000440 1.7e-10 70.9 186 28.5
FAN27G0844 Fragaria x ananassa HOM05D007879 ORTHO05D000440 9.3e-09 65.1 63 55.6
arahy.Tifrunner.gnm1.ann1.0QMX18 Arachis hypogaea HOM05D007879 ORTHO05D000440 1.0e-07 61.6 60 55.0
arahy.Tifrunner.gnm1.ann1.4C4IKF Arachis hypogaea HOM05D007879 ORTHO05D000440 8.7e-07 58.5 160 33.1
FAN20G0635 Fragaria x ananassa HOM05D007879 ORTHO05D000440 2.5e-06 57.0 54 57.4
HPP92_013708 Vanilla planifolia HOM05D001286 ORTHO05D000440 3.3e-06 56.6 182 27.5


User provided reference genes

Program Settings