Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G274100 Prunus persica HOM05D001418 ORTHO05D003753 2.5e-93 345.5 181 100.0
MD00G1091900 Malus domestica HOM05D001418 ORTHO05D003753 6.5e-54 214.5 168 73.8
ClCG02G000350 Citrullus lanatus HOM05D001418 ORTHO05D003753 2.8e-20 102.8 80 60.0
Lalb_Chr13g0296701 Lupinus albus HOM05D001418 ORTHO05D003753 1.1e-19 100.9 90 55.6
CiPaw.03G118500 Carya illinoinensis HOM05D001418 ORTHO05D003753 1.4e-19 100.5 171 41.5
Lalb_Chr07g0184281 Lupinus albus HOM05D001418 ORTHO05D003753 3.1e-19 99.4 164 40.2
MELO3C023225.2 Cucumis melo HOM05D001418 ORTHO05D003753 5.2e-19 98.6 172 42.4
CsaV3_2G019490 Cucumis sativus L. HOM05D001418 ORTHO05D003753 5.2e-19 98.6 172 40.7
Psat7g044600 Pisum sativum HOM05D001418 ORTHO05D003753 2.6e-18 96.3 167 39.5
Manes.12G158100 Manihot esculenta HOM05D001418 ORTHO05D003753 3.4e-18 95.9 172 38.4
Duzib264G0973 Durio zibethinus HOM05D001418 ORTHO05D003753 9.9e-18 94.4 180 39.4
Lj4g0007966 Lotus japonicus HOM05D001418 ORTHO05D003753 1.7e-17 93.6 167 42.5
Atru.chr4.944 Acer truncatum HOM05D001418 ORTHO05D003753 2.2e-17 93.2 71 62.0
THA.LOC104804459 Tarenaya hassleriana HOM05D001418 ORTHO05D003753 4.9e-17 92.0 167 42.5
VMungo0251G3540 Vigna mungo HOM05D001418 ORTHO05D003753 6.4e-17 91.7 111 45.9
BcaC09g51866 Brassica carinata HOM05D001418 ORTHO05D003753 1.1e-16 90.9 167 39.5
C01p08160 Brassica napus HOM05D001418 ORTHO05D003753 1.1e-16 90.9 167 39.5
BolC1t00803H Brassica oleracea HOM05D001418 ORTHO05D003753 1.1e-16 90.9 167 39.5
QL10p041674 Quercus lobata HOM05D001418 ORTHO05D003753 1.1e-16 90.9 94 52.1
QL10p041864 Quercus lobata HOM05D001418 ORTHO05D003753 1.1e-16 90.9 94 52.1
AL7G21370 Arabidopsis lyrata HOM05D001418 ORTHO05D003753 1.4e-16 90.5 170 42.9
CARHR238610 Cardamine hirsuta HOM05D001418 ORTHO05D003753 1.4e-16 90.5 169 42.6
BcaNung02743 Brassica carinata HOM05D001418 ORTHO05D003753 1.9e-16 90.1 167 40.7
A01p07400 Brassica napus HOM05D001418 ORTHO05D003753 1.9e-16 90.1 167 39.5
BraA01t00689Z Brassica rapa HOM05D001418 ORTHO05D003753 1.9e-16 90.1 167 39.5
Phvul.002G274200 Phaseolus vulgaris HOM05D001418 ORTHO05D003753 1.9e-16 90.1 99 46.5
Potri.005G066500 Populus trichocarpa HOM05D001418 ORTHO05D003753 2.4e-16 89.7 172 38.4
Sed0004234 Sechium edule HOM05D001418 ORTHO05D003753 2.4e-16 89.7 108 48.1
AT4G30770 Arabidopsis thaliana HOM05D001418 ORTHO05D003753 3.2e-16 89.4 170 41.8
C07p58200 Brassica napus HOM05D001418 ORTHO05D003753 4.1e-16 89.0 167 40.7
BraA03t15071Z Brassica rapa HOM05D001418 ORTHO05D003753 4.1e-16 89.0 167 40.7
Duzib187G1961 Durio zibethinus HOM05D001418 ORTHO05D003753 4.1e-16 89.0 172 39.5
Glyma.04G210600 Glycine max HOM05D001418 ORTHO05D003753 4.1e-16 89.0 165 37.6
A03p60290 Brassica napus HOM05D001418 ORTHO05D003753 5.4e-16 88.6 167 40.7
BolC7t46274H Brassica oleracea HOM05D001418 ORTHO05D002038 5.4e-16 88.6 166 40.4
Glyma.06G155400 Glycine max HOM05D001418 ORTHO05D003753 5.4e-16 88.6 165 37.6
CANSAT01G1075 Cannabis sativa HOM05D001418 ORTHO05D003753 7.1e-16 88.2 194 35.1
FAN19G0125 Fragaria x ananassa HOM05D001418 ORTHO05D003753 7.1e-16 88.2 103 49.5
THA.LOC104804402 Tarenaya hassleriana HOM05D001418 ORTHO05D003753 7.1e-16 88.2 167 41.3
BcaNung04827 Brassica carinata HOM05D001418 ORTHO05D003753 9.2e-16 87.8 167 38.3
FAN26G3393 Fragaria x ananassa HOM05D001418 ORTHO05D003753 9.2e-16 87.8 103 49.5
Sed0024034 Sechium edule HOM05D001418 ORTHO05D003753 9.2e-16 87.8 169 39.6
BcaNung01562 Brassica carinata HOM05D001418 ORTHO05D003753 1.2e-15 87.4 167 40.1
Lalb_Chr12g0203061 Lupinus albus HOM05D001418 ORTHO05D003753 1.2e-15 87.4 165 38.2
Haze_25311 Corylus avellana HOM05D001418 ORTHO05D003753 2.1e-15 86.7 79 57.0
TWI79G1507 Tripterygium wilfordii HOM05D001418 ORTHO05D003753 2.7e-15 86.3 171 39.8
Haze_18313 Corylus avellana HOM05D001418 ORTHO05D003753 4.6e-15 85.5 75 56.0
Thhalv10027257m.g Eutrema salsugineum HOM05D001418 ORTHO05D003753 4.6e-15 85.5 167 40.1
Sabra05G0054800 Salix brachista HOM05D001418 ORTHO05D003753 4.6e-15 85.5 76 51.3
TPR.G37392 Trifolium pratense HOM05D001418 ORTHO05D003753 4.6e-15 85.5 167 39.5
FvH4_1g24680 Fragaria vesca HOM05D001418 ORTHO05D003753 7.8e-15 84.7 103 48.5
Cpa.g.sc1441.4 Carica papaya HOM05D001418 ORTHO05D003753 1.0e-14 84.3 193 38.3
Thecc.01G136200 Theobroma cacao HOM05D001418 ORTHO05D003753 1.3e-14 84.0 185 38.4
Carub.0007s0979 Capsella rubella HOM05D001418 ORTHO05D003753 1.7e-14 83.6 167 39.5
Sabra07G0084500 Salix brachista HOM05D001418 ORTHO05D003753 2.3e-14 83.2 173 39.9
Medtr8g094040 Medicago truncatula HOM05D001418 ORTHO05D003753 3.0e-14 82.8 168 38.7
Sp7g28640 Schrenkiella parvula HOM05D001418 ORTHO05D003753 3.9e-14 82.4 167 41.3
CiPaw.04G080200 Carya illinoinensis HOM05D001418 ORTHO05D003753 1.1e-13 80.9 198 37.4
Ciclev10003211m.g Citrus clementina HOM05D001418 ORTHO05D003753 2.5e-13 79.7 165 37.0
Gohir.A09G005000 Gossypium hirsutum HOM05D001418 ORTHO05D003753 2.5e-13 79.7 174 35.1
Glyma.08G001800 Glycine max HOM05D001418 ORTHO05D003753 4.3e-13 79.0 101 44.6
arahy.Tifrunner.gnm1.ann1.QAD3X4 Arachis hypogaea HOM05D001418 ORTHO05D003753 5.6e-13 78.6 170 39.4
Gohir.D09G004300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 1.2e-12 77.4 166 37.3
Gorai.006G005900 Gossypium raimondii HOM05D001418 ORTHO05D003753 1.2e-12 77.4 166 37.3
QL10p041870 Quercus lobata HOM05D001418 ORTHO05D003753 2.1e-12 76.6 96 45.8
PGR102G3103 Punica granatum HOM05D001418 ORTHO05D003753 2.8e-12 76.3 184 36.4
Cfa021634 Carpinus fangiana HOM05D001418 ORTHO05D003753 4.7e-12 75.5 187 35.8
Cfa021635 Carpinus fangiana HOM05D001418 ORTHO05D003753 4.7e-12 75.5 187 35.8
BcaC01g01138 Brassica carinata HOM05D001418 ORTHO05D003753 6.2e-12 75.1 158 39.9
C03p88500 Brassica napus HOM05D001418 ORTHO05D003753 6.2e-12 75.1 158 39.9
BolC3t21160H Brassica oleracea HOM05D001418 ORTHO05D003753 6.2e-12 75.1 158 39.9
BcaB03g12658 Brassica carinata HOM05D001418 ORTHO05D003753 8.1e-12 74.7 153 40.5
Phvul.009G155100 Phaseolus vulgaris HOM05D001418 ORTHO05D003753 8.1e-12 74.7 171 32.2
Gohir.D10G108200 Gossypium hirsutum HOM05D001418 ORTHO05D003753 1.1e-11 74.3 175 36.0
Gorai.011G118700 Gossypium raimondii HOM05D001418 ORTHO05D003753 1.8e-11 73.6 175 36.6
Sc06g0005400 Simmondsia chinensis HOM05D001418 ORTHO05D003753 1.8e-11 73.6 172 36.6
Sc16g0009500 Simmondsia chinensis HOM05D001418 ORTHO05D003753 3.1e-11 72.8 128 39.1
Os12g0182000 Oryza sativa ssp. japonica HOM05D001418 ORTHO05D003753 5.2e-11 72.0 70 45.7
QL10p041669 Quercus lobata HOM05D001418 ORTHO05D003753 5.2e-11 72.0 192 35.4
TAR381G0240 Trochodendron aralioides HOM05D001418 ORTHO05D004504 5.2e-11 72.0 190 38.4
CiPaw.03G118600 Carya illinoinensis HOM05D001418 ORTHO05D003753 6.8e-11 71.6 190 35.3
Gohir.A10G157222 Gossypium hirsutum HOM05D001418 ORTHO05D003753 8.9e-11 71.2 175 35.4
Gohir.D11G061300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 8.9e-11 71.2 96 44.8
Zm00001eb112650 Zea mays HOM05D001418 ORTHO05D003753 8.9e-11 71.2 80 41.2
Gohir.A11G057300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 2.0e-10 70.1 96 42.7
RcHm_v2.0_Chr2g0122171 Rosa chinensis HOM05D001418 ORTHO05D003753 2.0e-10 70.1 55 65.5
Gorai.007G066200 Gossypium raimondii HOM05D001418 ORTHO05D003753 3.4e-10 69.3 82 46.3
VMungo1309G0848 Vigna mungo HOM05D001418 ORTHO05D003753 7.6e-10 68.2 93 39.8
Os11g0195700 Oryza sativa ssp. japonica HOM05D001418 ORTHO05D003753 1.3e-09 67.4 104 39.4
Nn1g08946 Nelumbo nucifera HOM05D001418 ORTHO05D003753 4.9e-09 65.5 192 30.7
AUR62000505 Chenopodium quinoa HOM05D001418 ORTHO05D003753 8.4e-09 64.7 144 35.4
Ah.02g114820 Amaranthus hybridus HOM05D001418 ORTHO05D003753 1.1e-08 64.3 168 34.5
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 1.9e-08 63.5 65 41.5
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.9e-08 63.5 185 31.9
AUR62029588 Chenopodium quinoa HOM05D001418 ORTHO05D003753 2.4e-08 63.2 179 30.7
HPP92_004456 Vanilla planifolia HOM05D001418 ORTHO05D003753 3.2e-08 62.8 63 44.4
AUR62034848 Chenopodium quinoa HOM05D001418 ORTHO05D003753 4.2e-08 62.4 169 33.7
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 4.2e-08 62.4 186 30.6
A08p19100 Brassica napus HOM05D001418 ORTHO05D003753 5.4e-08 62.0 138 37.0
BraA08t33872Z Brassica rapa HOM05D001418 ORTHO05D003753 5.4e-08 62.0 138 37.0
TAR628G0376 Trochodendron aralioides HOM05D001418 ORTHO05D003753 5.4e-08 62.0 181 33.7
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 7.1e-08 61.6 64 46.9
Eucgr.H05149 Eucalyptus grandis HOM05D001418 ORTHO05D003753 1.2e-07 60.8 195 30.8
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 1.6e-07 60.5 172 30.2
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 1.6e-07 60.5 67 44.8
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 2.7e-07 59.7 171 30.4
Zm00001eb202060 Zea mays HOM05D001418 ORTHO05D003753 3.5e-07 59.3 94 33.0
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 4.6e-07 58.9 114 36.8
Ah.06g190930 Amaranthus hybridus HOM05D001418 ORTHO05D003753 7.8e-07 58.2 206 33.0
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 7.8e-07 58.2 183 31.1
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 1.0e-06 57.8 69 39.1
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.0e-06 57.8 185 30.8
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 1.0e-06 57.8 99 42.4
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 1.7e-06 57.0 62 37.1
AUR62006850 Chenopodium quinoa HOM05D001418 ORTHO05D003753 2.3e-06 56.6 144 34.0
HPP92_025164 Vanilla planifolia HOM05D001418 ORTHO05D003753 2.3e-06 56.6 69 39.1
HPP92_025177 Vanilla planifolia HOM05D001418 ORTHO05D003753 2.3e-06 56.6 69 39.1
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 3.9e-06 55.8 67 40.3
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 3.9e-06 55.8 62 35.5
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 6.6e-06 55.1 76 38.2
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 6.6e-06 55.1 113 36.3
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 6.6e-06 55.1 187 30.5
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 6.6e-06 55.1 62 35.5
Psat0s409g0080 Pisum sativum HOM05D007511 ORTHO05D003753 8.7e-06 54.7 69 39.1


User provided reference genes

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