Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 1.6e-138 496.1 256 100.0
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 9.1e-94 347.4 256 73.4
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 1.5e-91 340.1 253 70.0
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 4.7e-90 335.1 253 69.6
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 1.0e-89 334.0 253 71.1
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 3.0e-89 332.4 253 69.6
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 4.7e-82 308.5 254 64.6
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 3.0e-81 305.8 296 58.8
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 5.2e-81 305.1 254 65.7
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 4.1e-78 295.4 253 64.0
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 5.4e-78 295.0 255 64.3
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 3.9e-76 288.9 254 65.0
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.2e-74 283.9 255 61.6
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 2.8e-74 282.7 255 61.2
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 6.8e-73 278.1 255 60.0
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 6.0e-69 265.0 250 60.4
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 7.8e-69 264.6 245 59.2
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 7.8e-69 264.6 253 56.1
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 5.1e-68 261.9 246 57.7
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 1.1e-67 260.8 244 58.2
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 1.5e-67 260.4 257 54.1
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 1.5e-67 260.4 257 56.0
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 4.3e-67 258.8 255 56.9
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 1.2e-66 257.3 247 58.3
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 6.2e-66 255.0 252 56.7
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 5.2e-65 251.9 248 58.9
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 8.9e-65 251.1 253 56.9
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 1.2e-64 250.8 248 58.5
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 9.9e-64 247.7 248 54.4
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 2.9e-63 246.1 256 53.1
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 3.7e-63 245.7 258 53.9
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 5.4e-62 241.9 258 53.9
Sopen01g048040 Solanum pennellii HOM05D007225 ORTHO05D009062 2.1e-61 240.0 258 53.5
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 1.0e-60 237.7 257 51.8
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 7.3e-59 231.5 248 51.6
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 2.1e-58 229.9 257 51.0
PGR119G1418 Punica granatum HOM05D007225 ORTHO05D009062 1.8e-57 226.9 254 52.8
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 4.0e-57 225.7 250 48.4
Nitab4.5_0000386g0080 Nicotiana tabacum HOM05D007225 ORTHO05D009062 8.9e-57 224.6 254 50.8
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 4.4e-56 222.2 247 51.8
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 9.9e-56 221.1 247 53.4
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 9.9e-56 221.1 254 52.8
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 1.1e-54 217.6 255 54.1
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 2.4e-54 216.5 265 47.5
Sc07g0001760 Simmondsia chinensis HOM05D007225 ORTHO05D009062 3.2e-54 216.1 254 48.8
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 5.4e-54 215.3 261 48.7
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 7.1e-54 214.9 256 49.2
Manes.12G157300 Manihot esculenta HOM05D007225 ORTHO05D009062 1.2e-53 214.2 218 54.1
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 1.6e-53 213.8 258 48.8
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 3.0e-52 209.5 248 48.0
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 3.9e-52 209.1 265 46.0
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 8.7e-52 208.0 371 38.8
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 1.2e-50 204.1 273 48.0
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 1.2e-50 204.1 274 46.4
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 1.2e-50 204.1 274 46.4
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 1.1e-49 201.1 249 45.4
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 2.4e-49 199.9 274 45.6
AT5G64010 Arabidopsis thaliana HOM05D007225 ORTHO05D009062 5.8e-48 195.3 246 47.6
Lsat_1_v5_gn_5_68521 Lactuca sativa HOM05D007225 ORTHO05D009062 1.7e-47 193.7 234 48.3
Gohir.A10G156900 Gossypium hirsutum HOM05D007225 ORTHO05D009062 6.4e-47 191.8 168 60.1
Sp2g27080 Schrenkiella parvula HOM05D007225 ORTHO05D009062 6.4e-47 191.8 249 47.4
EL10Ac1g01390 Beta vulgaris HOM05D007225 ORTHO05D009062 8.4e-47 191.4 311 41.5
VMungo0251G1761 Vigna mungo HOM05D007225 ORTHO05D009062 1.4e-46 190.7 235 51.5
Thhalv10004850m.g Eutrema salsugineum HOM05D007225 ORTHO05D009062 3.2e-46 189.5 226 50.0
Medtr8g093850 Medicago truncatula HOM05D007225 ORTHO05D009062 3.2e-46 189.5 167 57.5
BraA06t26013Z Brassica rapa HOM05D007225 ORTHO05D009062 7.1e-46 188.3 252 46.8
A06p30630 Brassica napus HOM05D007225 ORTHO05D009062 9.3e-46 188.0 252 46.4
DCAR_010250 Daucus carota HOM05D007225 ORTHO05D009062 9.3e-46 188.0 254 44.9
C03p62330 Brassica napus HOM05D007225 ORTHO05D009062 1.2e-45 187.6 249 46.2
AL8G41270 Arabidopsis lyrata HOM05D007225 ORTHO05D009062 1.6e-45 187.2 246 45.9
BcaC01g02654 Brassica carinata HOM05D007225 ORTHO05D009062 2.7e-45 186.4 249 45.8
BolC3t18495H Brassica oleracea HOM05D007225 ORTHO05D009062 2.7e-45 186.4 249 45.8
GSVIVG01022343001 Vitis vinifera HOM05D007225 ORTHO05D009062 4.6e-45 185.7 158 62.0
Carub.0008s2479 Capsella rubella HOM05D007225 ORTHO05D009062 1.3e-44 184.1 247 46.6
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 5.1e-44 182.2 212 49.5
Aqoxy6G00280 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 5.6e-43 178.7 258 43.8
Nn5g28498 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.3e-42 177.6 175 52.6
Peaxi162Scf00172g00611 Petunia axillaris HOM05D007225 ORTHO05D009062 2.8e-42 176.4 154 57.8
CARHR277930 Cardamine hirsuta HOM05D007225 ORTHO05D002208 1.1e-41 174.5 249 45.8
THA.LOC104818429 Tarenaya hassleriana HOM05D007225 ORTHO05D009062 3.4e-40 169.5 250 43.6
Aa31LG1G17910 Aethionema arabicum HOM05D007225 ORTHO05D009062 9.3e-38 161.4 243 42.8
Haze_25275 Corylus avellana HOM05D007225 ORTHO05D009062 2.1e-37 160.2 106 72.6
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.0e-36 157.9 254 41.7
RcHm_v2.0_Chr4g0412711 Rosa chinensis HOM05D007225 ORTHO05D009062 3.9e-36 156.0 114 71.9
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 1.5e-35 154.1 168 52.4
DCAR_014328 Daucus carota HOM05D007225 ORTHO05D009062 1.5e-35 154.1 247 41.7
arahy.Tifrunner.gnm1.ann1.ST1FFJ Arachis hypogaea HOM05D007225 ORTHO05D009062 5.6e-35 152.1 235 41.3
HPP92_025180 Vanilla planifolia HOM05D007225 ORTHO05D009062 9.6e-35 151.4 267 38.2
HanXRQChr12g0380581 Helianthus annuus HOM05D007225 ORTHO05D009062 6.9e-33 145.2 189 45.5
Ah.02g121670 Amaranthus hybridus HOM05D007225 ORTHO05D009062 9.0e-33 144.8 193 42.0
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 1.5e-32 144.1 256 40.2
unitig_699.g19729 Utricularia gibba HOM05D007225 ORTHO05D009062 6.4e-31 138.7 253 36.4
AagrBONN_evm.TU.Sc2ySwM_368.986 Anthoceros agrestis HOM05D007225 ORTHO05D009062 4.2e-30 136.0 275 32.7
ATR0709G077 Amborella trichopoda HOM05D007225 ORTHO05D009062 1.6e-29 134.0 228 36.8
SGA_v2.0_scaffold20G09018 Striga asiatica HOM05D007225 ORTHO05D009062 1.0e-28 131.3 166 44.6
Pp3c8_18500 Physcomitrium patens HOM05D007225 ORTHO05D009062 1.3e-26 124.4 201 39.3
Nitab4.5_0008206g0020 Nicotiana tabacum HOM05D007225 ORTHO05D009062 4.8e-26 122.5 157 48.4
Os04g0693250 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 3.1e-25 119.8 240 35.0
Nitab4.5_0010123g0010 Nicotiana tabacum HOM05D007225 ORTHO05D009062 2.0e-24 117.1 157 45.9
Mapoly0095s0053 Marchantia polymorpha HOM05D007225 ORTHO05D009062 1.7e-23 114.0 193 36.3
SHI11479 Sapria himalayana HOM05D000043 ORTHO05D002577 4.2e-22 109.4 107 51.4
SMO146G0397 Selaginella moellendorffii HOM05D007225 ORTHO05D009062 2.1e-21 107.1 264 31.4
Carub.0003s2889 Capsella rubella HOM05D007225 ORTHO05D009062 4.3e-19 99.4 83 55.4
AagrBONN_evm.TU.Sc2ySwM_117.1984 Anthoceros agrestis HOM05D007225 ORTHO05D009062 1.4e-17 94.4 254 29.9
GSVIVG01022344001 Vitis vinifera HOM05D007225 ORTHO05D009062 1.3e-15 87.8 100 52.0
arahy.Tifrunner.gnm1.ann1.LBHD5T Arachis hypogaea HOM05D007225 ORTHO05D009062 3.7e-10 69.7 149 34.2
SEGI_25786 Sequoiadendron giganteum HOM05D021798 ORTHO05D009062 8.2e-10 68.6 155 31.0
Os04g0693200 Oryza sativa ssp. japonica HOM05D007225 ORTHO05D009062 1.2e-08 64.7 72 43.1
CBR_g23098 Chara braunii HOM05D007225 ORTHO05D009062 8.5e-07 58.5 226 24.3
Peaxi162Scf00172g00068 Petunia axillaris HOM05D007225 ORTHO05D009062 9.4e-06 55.1 84 44.0


User provided reference genes

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