Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 0.0e+00 3474.5 1825 100.0
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 0.0e+00 3138.2 1825 89.6
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 0.0e+00 2885.9 1814 83.1
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 0.0e+00 2837.8 1819 81.5
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 0.0e+00 2829.3 1815 81.4
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 0.0e+00 2785.4 1839 79.8
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 0.0e+00 2781.1 1815 80.8
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 0.0e+00 2759.2 1819 79.7
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 0.0e+00 2706.4 1822 77.3
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 0.0e+00 2679.4 1804 76.6
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 0.0e+00 2673.3 1817 76.7
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 0.0e+00 2667.1 1872 74.5
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 0.0e+00 2611.6 1816 73.3
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 0.0e+00 2599.3 1819 74.3
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 0.0e+00 2584.7 1810 73.6
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 0.0e+00 2578.5 1821 73.2
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 0.0e+00 2561.9 1814 72.9
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 0.0e+00 2557.7 1839 72.4
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 0.0e+00 2554.6 1839 72.3
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 0.0e+00 2543.1 1816 72.6
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 0.0e+00 2530.4 1819 72.1
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 0.0e+00 2525.4 1821 71.9
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 0.0e+00 2513.8 1820 71.8
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 0.0e+00 2509.6 1815 72.0
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 0.0e+00 2508.4 1818 71.5
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 0.0e+00 2501.9 1808 72.4
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 0.0e+00 2500.7 1821 71.3
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 0.0e+00 2495.3 1813 72.0
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 0.0e+00 2494.9 1817 71.3
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 0.0e+00 2493.0 1820 71.6
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 0.0e+00 2476.0 1817 71.1
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 0.0e+00 2459.5 1804 69.8
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 0.0e+00 2456.4 1815 70.8
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 0.0e+00 2445.2 1822 69.5
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 0.0e+00 2445.2 1816 70.3
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 0.0e+00 2442.2 1819 69.3
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 0.0e+00 2435.6 1816 69.7
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 0.0e+00 2432.1 1833 69.2
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 0.0e+00 2429.1 1814 68.9
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 0.0e+00 2424.0 1822 68.6
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 0.0e+00 2417.5 1805 69.9
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 0.0e+00 2416.7 1810 68.3
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 0.0e+00 2415.6 1812 68.5
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 0.0e+00 2412.9 1853 69.3
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 0.0e+00 2410.2 1819 67.6
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 0.0e+00 2409.8 1822 67.3
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 0.0e+00 2407.9 1824 67.9
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 0.0e+00 2401.7 1820 67.9
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 0.0e+00 2401.7 1805 67.1
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 0.0e+00 2384.4 2365 56.5
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 0.0e+00 2382.4 1818 68.3
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 0.0e+00 2382.4 1814 68.5
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 0.0e+00 2370.1 1798 69.7
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 0.0e+00 2365.5 1822 66.1
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 0.0e+00 2353.9 1846 66.6
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 0.0e+00 2353.6 1823 67.3
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 0.0e+00 2343.5 1809 67.1
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 0.0e+00 2325.8 1819 67.2
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 0.0e+00 2321.6 1815 67.1
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 0.0e+00 2319.3 1813 65.7
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 0.0e+00 2318.9 1814 65.8
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 0.0e+00 2312.7 1813 65.8
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 0.0e+00 2310.4 1826 65.2
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 0.0e+00 2305.8 1812 65.2
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 0.0e+00 2300.0 1822 65.1
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 0.0e+00 2298.1 1828 64.7
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 0.0e+00 2295.8 1987 61.4
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 0.0e+00 2290.8 1817 64.9
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 0.0e+00 2276.9 1807 65.0
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 0.0e+00 2276.5 1824 65.0
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 0.0e+00 2261.5 1848 64.0
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 0.0e+00 2232.6 1827 63.4
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 0.0e+00 2231.8 1836 63.1
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 0.0e+00 2198.3 1900 61.9
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 0.0e+00 2171.0 1805 62.8
Gohir.A09G108500 Gossypium hirsutum HOM05D004500 ORTHO05D005775 0.0e+00 2063.1 1485 72.1
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 0.0e+00 2056.6 1825 59.0
PSO339G3895 Papaver somniferum HOM05D004500 ORTHO05D005775 0.0e+00 2053.9 1501 69.8
Thecc.09G254300 Theobroma cacao HOM05D004500 ORTHO05D005775 0.0e+00 2010.3 1399 74.3
Solyc11g062310.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 0.0e+00 1912.9 1355 71.8
Peaxi162Scf00029g02524 Petunia axillaris HOM05D004500 ORTHO05D005775 0.0e+00 1885.5 1327 72.5
DCAR_023834 Daucus carota HOM05D004500 ORTHO05D005775 0.0e+00 1872.8 1400 69.5
Haze_23271 Corylus avellana HOM05D004500 ORTHO05D005775 0.0e+00 1817.7 1368 71.2
COL.COLO4_06617 Corchorus olitorius HOM05D004500 ORTHO05D005775 0.0e+00 1816.6 1306 72.3
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 0.0e+00 1662.1 1871 48.9
Lj1C1068G11 Lonicera japonica HOM05D004500 ORTHO05D005775 0.0e+00 1639.4 1341 65.6
Rhsim13G0205000 Rhododendron simsii HOM05D004500 ORTHO05D005775 0.0e+00 1615.5 1232 68.8
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 0.0e+00 1613.2 1842 49.7
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 0.0e+00 1579.3 1868 47.5
Pp3c1_28010 Physcomitrium patens HOM05D004500 ORTHO05D005775 0.0e+00 1560.4 1891 47.0
Ah.06g194800 Amaranthus hybridus HOM05D004500 ORTHO05D005775 0.0e+00 1541.6 1155 69.2
Nitab4.5_0002026g0140 Nicotiana tabacum HOM05D004500 ORTHO05D005775 0.0e+00 1471.4 1099 68.9
SMO228G0054 Selaginella moellendorffii HOM05D004500 ORTHO05D005775 0.0e+00 1464.1 1660 48.4
BcaB04g17016 Brassica carinata HOM05D004500 ORTHO05D005775 0.0e+00 1365.5 1347 56.9
Os11g0137300 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 0.0e+00 1321.6 1115 60.9
CDE02G2423 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 0.0e+00 1178.3 1053 59.5
Os12g0134200 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 0.0e+00 1137.5 905 63.3
CBR_g37490 Chara braunii HOM05D004500 ORTHO05D005775 7.8e-288 995.0 1669 36.4
SEGI_14316 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 7.8e-280 968.4 886 57.2
MCO04G062 Micromonas commoda HOM05D004500 ORTHO05D005775 2.5e-254 883.6 1733 34.3
Cpa.g.sc34.185 Carica papaya HOM05D004500 ORTHO05D005775 5.1e-247 859.4 636 69.5
PRCOL_00001646 Prasinoderma coloniale HOM05D004500 ORTHO05D005775 1.6e-240 837.8 1739 34.0
HPP92_022829 Vanilla planifolia HOM05D004500 ORTHO05D005775 9.6e-238 828.6 769 56.8
Cpa.g.sc34.186 Carica papaya HOM05D004500 ORTHO05D005775 2.8e-213 747.3 510 74.7
Psat7g231400 Pisum sativum HOM05D004500 ORTHO05D005775 3.7e-213 746.9 600 66.5
Os12g0148400 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 2.7e-179 634.4 704 49.9
VMungo0647G1179 Vigna mungo HOM05D004500 ORTHO05D005775 5.9e-179 633.3 454 72.7
COL.COLO4_06618 Corchorus olitorius HOM05D004500 ORTHO05D005775 2.5e-177 627.9 455 71.0
Cre04.g217935 Chlamydomonas reinhardtii HOM05D004500 ORTHO05D005775 2.4e-172 611.3 2021 27.5
Psat7g231320 Pisum sativum HOM05D004500 ORTHO05D005775 5.4e-164 583.6 451 69.0
Haze_23272 Corylus avellana HOM05D004500 ORTHO05D005775 1.4e-159 568.9 457 68.7
SEGI_37322 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 7.6e-158 563.1 543 55.1
vmacro04081 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 1.4e-148 532.3 347 77.5
FAN21G2043 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.7e-138 498.8 371 73.0
Psat6g216840 Pisum sativum HOM05D004500 ORTHO05D005775 1.7e-138 498.8 315 78.1
CDE02G1339 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 3.1e-119 434.9 827 36.6
Cfa026787 Carpinus fangiana HOM05D004500 ORTHO05D005775 7.7e-110 403.7 1596 24.5
Peaxi162Scf00029g02523 Petunia axillaris HOM05D004500 ORTHO05D005775 4.2e-100 371.3 290 65.2
Solyc11g062320.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 4.4e-97 361.3 297 63.3
Nitab4.5_0002026g0160 Nicotiana tabacum HOM05D004500 ORTHO05D005775 2.0e-94 352.4 298 62.1
vmacro04082 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 7.0e-79 300.8 161 89.4
vmacro04079 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 6.8e-74 284.3 278 53.6
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 2.8e-67 262.3 339 48.1
Hma1.2p1_0460F.1_g157660 Hydrangea macrophylla HOM05D004500 ORTHO05D005775 8.3e-64 250.8 194 68.0
HPP92_022831 Vanilla planifolia HOM05D004500 ORTHO05D005775 1.7e-61 243.0 346 40.8
SEGI_21027 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 8.9e-58 230.7 206 58.3
Gohir.A09G108566 Gossypium hirsutum HOM05D004500 ORTHO05D005775 9.2e-55 220.7 162 67.9
EL10Ac5g11937 Beta vulgaris HOM05D004500 ORTHO05D005775 2.1e-46 193.0 209 51.2
MELO3C032687.2 Cucumis melo HOM05D004500 ORTHO05D005775 1.0e-45 190.7 154 62.3
Psat6g216720 Pisum sativum HOM05D004500 ORTHO05D005775 3.0e-45 189.1 130 73.1
Thhalv10012226m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 6.6e-45 188.0 342 41.2
PSO339G2400 Papaver somniferum HOM05D004500 ORTHO05D005775 6.6e-45 188.0 288 43.1
Psat0s1467g0200 Pisum sativum HOM05D004500 ORTHO05D005775 6.2e-43 181.4 177 59.9
Psat5g143880 Pisum sativum HOM05D004500 ORTHO05D001434 2.3e-42 179.5 177 59.3
vmacro04083 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 5.2e-42 178.3 145 64.8
BcaC01g01445 Brassica carinata HOM05D004500 ORTHO05D005775 4.1e-39 168.7 147 63.9
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 8.6e-37 161.0 217 41.0
VMungo0647G0474 Vigna mungo HOM05D004500 ORTHO05D005775 9.6e-36 157.5 167 55.1
Solyc11g062300.3 Solanum lycopersicum HOM05D004500 ORTHO05D028702 2.1e-35 156.4 174 47.1
arahy.Tifrunner.gnm1.ann1.K04MEX Arachis hypogaea HOM05D004500 ORTHO05D005775 1.2e-30 140.6 121 62.8
SEGI_00521 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 1.3e-29 137.1 258 35.7
MELO3C033637.2 Cucumis melo HOM05D007110 ORTHO05D000233 1.9e-28 133.3 156 49.4
Psat2g099920 Pisum sativum HOM05D001218 ORTHO05D015696 2.4e-26 126.3 91 67.0
Lj1A1068G47 Lonicera japonica HOM05D004500 ORTHO05D005775 3.4e-25 122.5 78 78.2
Psat2g090360 Pisum sativum HOM05D001218 ORTHO05D015696 3.8e-24 119.0 76 75.0
Peaxi162Scf00029g02525 Petunia axillaris HOM05D004500 ORTHO05D028702 2.4e-23 116.3 171 39.2
Lj1A1068G46 Lonicera japonica HOM05D001538 ORTHO05D011045 2.3e-21 109.8 121 52.9
Cre04.g217942 Chlamydomonas reinhardtii HOM05D004500 ORTHO05D005775 1.1e-20 107.5 196 32.7
SEGI_03367 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 1.5e-20 107.1 167 41.9
MELO3C035575.2 Cucumis melo HOM05D004500 ORTHO05D005775 3.7e-19 102.4 90 60.0
SEGI_00784 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 1.5e-17 97.1 84 51.2
SEGI_28959 Sequoiadendron giganteum HOM05D004500 ORTHO05D050968 9.9e-17 94.4 210 33.8
HPP92_022828 Vanilla planifolia HOM05D004500 ORTHO05D005775 6.4e-16 91.7 77 63.6
MD12G1083300 Malus domestica HOM05D004500 ORTHO05D005775 3.5e-14 85.9 76 68.4
SEGI_16541 Sequoiadendron giganteum HOM05D004500 ORTHO05D011045 2.3e-13 83.2 55 69.1
Psat0s2295g0160 Pisum sativum HOM05D003609 ORTHO05D004185 5.1e-13 82.0 118 46.6
Nitab4.5_0004629g0080 Nicotiana tabacum HOM05D004500 ORTHO05D028702 1.3e-11 77.4 70 47.1
SEGI_01442 Sequoiadendron giganteum HOM05D004500 ORTHO05D050968 2.0e-09 70.1 115 37.4
EL10Ac5g12062 Beta vulgaris HOM05D004500 ORTHO05D005775 5.8e-09 68.6 60 53.3
SEGI_07125 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 2.9e-08 66.2 117 35.0
vmacro04080 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 7.1e-07 61.6 38 78.9


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