Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G268400 Prunus persica HOM05D006191 ORTHO05D007660 1.4e-26 122.5 75 100.0
MD00G1126200 Malus domestica HOM05D006191 ORTHO05D007660 3.2e-23 111.3 74 86.5
MD00G1154200 Malus domestica HOM05D006191 ORTHO05D007660 3.2e-23 111.3 74 86.5
Sp3g06830 Schrenkiella parvula HOM05D006191 ORTHO05D007660 6.7e-21 103.6 73 80.8
Ciclev10017371m.g Citrus clementina HOM05D006191 ORTHO05D007660 1.1e-20 102.8 74 78.4
Atru.chr3.2798 Acer truncatum HOM05D006191 ORTHO05D007660 3.3e-20 101.3 74 77.0
A05p40330 Brassica napus HOM05D006191 ORTHO05D007660 4.4e-20 100.9 73 76.7
Glyma.08G302200 Glycine max HOM05D006191 ORTHO05D007660 5.7e-20 100.5 70 81.4
C05p59410 Brassica napus HOM05D006191 ORTHO05D007660 1.7e-19 99.0 73 74.0
Lj6g0026433 Lotus japonicus HOM05D006191 ORTHO05D007660 1.7e-19 99.0 70 78.6
BolC5t34598H Brassica oleracea HOM05D006191 ORTHO05D007660 2.2e-19 98.6 73 74.0
Carub.0003s0749 Capsella rubella HOM05D006191 ORTHO05D007660 2.2e-19 98.6 73 75.3
TPR.G8494 Trifolium pratense HOM05D006191 ORTHO05D007660 2.2e-19 98.6 70 80.0
Duzib114G0719 Durio zibethinus HOM05D006191 ORTHO05D007660 2.8e-19 98.2 70 81.4
PSO339G4970 Papaver somniferum HOM05D006191 ORTHO05D007660 2.8e-19 98.2 70 82.9
PSO384G4772 Papaver somniferum HOM05D006191 ORTHO05D007660 2.8e-19 98.2 70 82.9
BcaB04g21265 Brassica carinata HOM05D006191 ORTHO05D007660 3.7e-19 97.8 74 77.0
CDE02G2705 Ceratophyllum demersum HOM05D006191 ORTHO05D007660 3.7e-19 97.8 70 75.7
HPP92_025477 Vanilla planifolia HOM05D006191 ORTHO05D007660 3.7e-19 97.8 70 81.4
CANSAT54G1797 Cannabis sativa HOM05D006191 ORTHO05D007660 4.8e-19 97.4 70 81.4
DCAR_002114 Daucus carota HOM05D006191 ORTHO05D007660 6.3e-19 97.1 74 77.0
Manes.01G180500 Manihot esculenta HOM05D006191 ORTHO05D007660 6.3e-19 97.1 70 80.0
Medtr3g434780 Medicago truncatula HOM05D006191 ORTHO05D007660 6.3e-19 97.1 70 78.6
MBI13_g01622_MAGBIO Magnolia biondii HOM05D006191 ORTHO05D007660 8.2e-19 96.7 70 78.6
Migut.D00650 Erythranthe guttata HOM05D006191 ORTHO05D007660 1.1e-18 96.3 70 78.6
Lalb_Chr07g0183161 Lupinus albus HOM05D006191 ORTHO05D007660 1.1e-18 96.3 74 78.4
Nn2g14883 Nelumbo nucifera HOM05D006191 ORTHO05D007660 1.1e-18 96.3 70 77.1
Nn7g36644 Nelumbo nucifera HOM05D000965 ORTHO05D000842 1.1e-18 96.3 70 77.1
BcaC05g29581 Brassica carinata HOM05D006191 ORTHO05D007660 1.4e-18 95.9 73 71.2
CAN.G484.24 Capsicum annuum HOM05D006191 ORTHO05D007660 1.4e-18 95.9 72 75.0
MELO3C014567.2 Cucumis melo HOM05D006191 ORTHO05D007660 1.4e-18 95.9 70 80.0
CsaV3_6G039080 Cucumis sativus L. HOM05D006191 ORTHO05D007660 1.4e-18 95.9 70 80.0
BcaC09g47957 Brassica carinata HOM05D006191 ORTHO05D007660 1.8e-18 95.5 73 72.6
A03p35550 Brassica napus HOM05D006191 ORTHO05D007660 1.8e-18 95.5 73 76.7
C03p43190 Brassica napus HOM05D006191 ORTHO05D007660 1.8e-18 95.5 73 76.7
BolC1t05519H Brassica oleracea HOM05D006191 ORTHO05D007660 1.8e-18 95.5 73 72.6
BolC3t16588H Brassica oleracea HOM05D006191 ORTHO05D007660 1.8e-18 95.5 73 76.7
BraA03t12731Z Brassica rapa HOM05D006191 ORTHO05D007660 1.8e-18 95.5 73 76.7
Sopen11g024870 Solanum pennellii HOM05D006191 ORTHO05D007660 1.8e-18 95.5 70 78.6
PGSC0003DMG400031241 Solanum tuberosum HOM05D006191 ORTHO05D007660 1.8e-18 95.5 70 78.6
Thecc.10G162100 Theobroma cacao HOM05D006191 ORTHO05D007660 1.8e-18 95.5 70 77.1
Atru.chr12.1349 Acer truncatum HOM05D006191 ORTHO05D007660 2.4e-18 95.1 70 77.1
Sed0001199 Sechium edule HOM05D006191 ORTHO05D007660 2.4e-18 95.1 70 78.6
CSS0014439 Camellia sinensis var. sinensis HOM05D006191 ORTHO05D007660 3.1e-18 94.7 70 78.6
Dinv05064 Davidia involucrata HOM05D006191 ORTHO05D007660 3.1e-18 94.7 74 75.7
Duzib106G0217 Durio zibethinus HOM05D006191 ORTHO05D007660 3.1e-18 94.7 70 78.6
Duzib128G0357 Durio zibethinus HOM05D006191 ORTHO05D007660 3.1e-18 94.7 70 78.6
Gohir.A10G183900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 3.1e-18 94.7 70 78.6
Gohir.D10G191200 Gossypium hirsutum HOM05D006191 ORTHO05D007660 3.1e-18 94.7 70 78.6
Gohir.D13G004600 Gossypium hirsutum HOM05D006191 ORTHO05D007660 3.1e-18 94.7 70 78.6
Gorai.011G214000 Gossypium raimondii HOM05D006191 ORTHO05D007660 3.1e-18 94.7 70 78.6
Gorai.013G005000 Gossypium raimondii HOM05D006191 ORTHO05D007660 3.1e-18 94.7 70 80.0
HanXRQChr06g0182571 Helianthus annuus HOM05D006191 ORTHO05D007660 3.1e-18 94.7 74 75.7
TAR623G0607 Trochodendron aralioides HOM05D006191 ORTHO05D007660 3.1e-18 94.7 70 78.6
AagrBONN_evm.TU.Sc2ySwM_362.136 Anthoceros agrestis HOM05D006191 ORTHO05D007660 4.1e-18 94.4 70 75.7
COL.COLO4_04799 Corchorus olitorius HOM05D006191 ORTHO05D007660 4.1e-18 94.4 69 78.3
Thhalv10021870m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 4.1e-18 94.4 74 77.0
Oeu030629.1 Olea europaea HOM05D006191 ORTHO05D007660 4.1e-18 94.4 70 77.1
Potri.009G071900 Populus trichocarpa HOM05D006191 ORTHO05D007660 4.1e-18 94.4 70 77.1
Sabra09G0054200 Salix brachista HOM05D006191 ORTHO05D007660 4.1e-18 94.4 70 77.1
GSVIVG01037255001 Vitis vinifera HOM05D006191 ORTHO05D007660 4.1e-18 94.4 70 78.6
Aa31LG5G18460 Aethionema arabicum HOM05D006191 ORTHO05D007660 5.3e-18 94.0 70 75.7
CiPaw.14G114100 Carya illinoinensis HOM05D006191 ORTHO05D007660 5.3e-18 94.0 70 77.1
Glyma.18G117700 Glycine max HOM05D006191 ORTHO05D007660 5.3e-18 94.0 70 78.6
Peaxi162Scf00004g04011 Petunia axillaris HOM05D006191 ORTHO05D007660 5.3e-18 94.0 70 75.7
Potri.001G277100 Populus trichocarpa HOM05D006191 ORTHO05D007660 5.3e-18 94.0 70 75.7
THA.LOC104819131 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 5.3e-18 94.0 70 77.1
TWI38G0245 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 5.3e-18 94.0 70 75.7
TWI63G0884 Tripterygium wilfordii HOM05D006191 ORTHO05D007660 5.3e-18 94.0 70 75.7
Eucgr.J01186 Eucalyptus grandis HOM05D006191 ORTHO05D007660 7.0e-18 93.6 70 75.7
Thhalv10022475m.g Eutrema salsugineum HOM05D006191 ORTHO05D007660 7.0e-18 93.6 74 75.7
Hma1.2p1_0115F.1_g055930 Hydrangea macrophylla HOM05D006191 ORTHO05D007660 7.0e-18 93.6 70 75.7
Nitab4.5_0004018g0100 Nicotiana tabacum HOM05D006191 ORTHO05D007660 7.0e-18 93.6 74 74.3
Pp3c9_12820 Physcomitrium patens HOM05D006191 ORTHO05D007660 7.0e-18 93.6 74 73.0
Sopen12g034350 Solanum pennellii HOM05D006191 ORTHO05D007660 7.0e-18 93.6 70 75.7
BraA01t04352Z Brassica rapa HOM05D006191 ORTHO05D007660 9.1e-18 93.2 73 71.2
Lsat_1_v5_gn_2_33900 Lactuca sativa HOM05D006191 ORTHO05D007660 9.1e-18 93.2 70 74.3
PGR031G0246 Punica granatum HOM05D006191 ORTHO05D007660 1.2e-17 92.8 70 74.3
QL01p017491 Quercus lobata HOM05D006191 ORTHO05D007660 1.2e-17 92.8 70 77.1
THA.LOC104825593 Tarenaya hassleriana HOM05D006191 ORTHO05D007660 1.6e-17 92.4 70 75.7
Cpa.g.sc3.359 Carica papaya HOM05D006191 ORTHO05D007660 2.0e-17 92.0 70 75.7
Oeu001494.1 Olea europaea HOM05D006191 ORTHO05D007660 2.0e-17 92.0 70 75.7
Sc11g0006400 Simmondsia chinensis HOM05D006191 ORTHO05D007660 2.0e-17 92.0 70 78.6
CAN.G1850.1 Capsicum annuum HOM05D006191 ORTHO05D007660 2.6e-17 91.7 70 75.7
AT3G07910 Arabidopsis thaliana HOM05D006191 ORTHO05D007660 3.5e-17 91.3 73 75.3
Mapoly0046s0044 Marchantia polymorpha HOM05D006191 ORTHO05D007660 3.5e-17 91.3 68 77.9
CDE04G1776 Ceratophyllum demersum HOM05D003123 ORTHO05D003492 4.5e-17 90.9 70 77.1
Solyc12g099705.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 7.7e-17 90.1 70 75.7
CARHR082640 Cardamine hirsuta HOM05D006191 ORTHO05D007660 1.0e-16 89.7 70 70.0
Potri.003G197801 Populus trichocarpa HOM05D006191 ORTHO05D007660 1.0e-16 89.7 70 74.3
Potri.T125106 Populus trichocarpa HOM05D006191 ORTHO05D007660 1.0e-16 89.7 70 74.3
ECA238G0093 Erigeron canadensis HOM05D006191 ORTHO05D007660 1.3e-16 89.4 71 70.4
EL10Ac2g02816 Beta vulgaris HOM05D006191 ORTHO05D007660 1.7e-16 89.0 70 72.9
Pp3c15_6032 Physcomitrium patens HOM05D006191 ORTHO05D007660 2.2e-16 88.6 70 70.0
SMO301G0059 Selaginella moellendorffii HOM05D006191 ORTHO05D007660 2.2e-16 88.6 67 76.1
ClCG02G022950 Citrullus lanatus HOM05D006191 ORTHO05D007660 2.9e-16 88.2 46 84.8
ATR0745G066 Amborella trichopoda HOM05D006191 ORTHO05D007660 5.0e-16 87.4 74 70.3
Aqoxy2G00346 Aquilegia oxysepala HOM05D006191 ORTHO05D007660 5.0e-16 87.4 68 66.2
Haze_23211 Corylus avellana HOM05D000001 ORTHO05D000003 5.0e-16 87.4 46 82.6
Zm00001eb432230 Zea mays HOM05D006191 ORTHO05D007660 5.0e-16 87.4 70 72.9
Actinidia23986 Actinidia chinensis HOM05D006191 ORTHO05D007660 8.5e-16 86.7 66 78.8
MCO15G227 Micromonas commoda HOM05D006191 ORTHO05D007660 3.2e-15 84.7 75 62.7
Sabra16G0171200 Salix brachista HOM05D006191 ORTHO05D007660 3.2e-15 84.7 73 69.9
Cc01_g05600 Coffea canephora HOM05D006191 ORTHO05D007660 5.5e-15 84.0 69 72.5
Cfa010050 Carpinus fangiana HOM05D000477 ORTHO05D000338 7.2e-15 83.6 71 70.4
Solyc11g150142.1 Solanum lycopersicum HOM05D006191 ORTHO05D007660 2.1e-14 82.0 66 68.2
AUR62037186 Chenopodium quinoa HOM05D006191 ORTHO05D007660 3.6e-14 81.3 46 73.9
Psat5g217760 Pisum sativum HOM05D006191 ORTHO05D007660 3.6e-14 81.3 67 76.1
FvH4_3g28030 Fragaria vesca HOM05D006191 ORTHO05D007660 6.1e-14 80.5 74 66.2
FAN16G3748 Fragaria x ananassa HOM05D006191 ORTHO05D007660 6.1e-14 80.5 74 66.2
RcHm_v2.0_Chr5g0050711 Rosa chinensis HOM05D006191 ORTHO05D007660 6.1e-14 80.5 74 66.2
FAN21G2777 Fragaria x ananassa HOM05D006191 ORTHO05D007660 8.0e-14 80.1 73 67.1
Glyma.04G138500 Glycine max HOM05D006191 ORTHO05D007660 8.0e-14 80.1 65 80.0
Cre01.g010500 Chlamydomonas reinhardtii HOM05D006191 ORTHO05D007660 1.0e-13 79.7 72 48.6
arahy.Tifrunner.gnm1.ann1.MB5P1Q Arachis hypogaea HOM05D006191 ORTHO05D007660 1.4e-13 79.3 65 80.0
FAN25G1591 Fragaria x ananassa HOM05D006191 ORTHO05D007660 1.4e-13 79.3 74 64.9
Lalb_Chr04g0264081 Lupinus albus HOM05D006191 ORTHO05D007660 2.3e-13 78.6 65 76.9
Lalb_Chr25g0282111 Lupinus albus HOM05D006191 ORTHO05D007660 2.3e-13 78.6 65 76.9
Phvul.005G027500 Phaseolus vulgaris HOM05D006191 ORTHO05D007660 2.3e-13 78.6 65 78.5
arahy.Tifrunner.gnm1.ann1.HDQ2FX Arachis hypogaea HOM05D006191 ORTHO05D007660 3.0e-13 78.2 65 78.5
Lj3g0010990 Lotus japonicus HOM05D006191 ORTHO05D007660 3.0e-13 78.2 65 78.5
Gohir.A13G004900 Gossypium hirsutum HOM05D006191 ORTHO05D007660 6.8e-13 77.0 77 66.2
TPR.G17809 Trifolium pratense HOM05D006191 ORTHO05D007660 8.8e-13 76.6 65 72.3
Medtr3g017440 Medicago truncatula HOM05D006191 ORTHO05D007660 1.5e-12 75.9 67 71.6
Zm00001eb068350 Zea mays HOM05D006191 ORTHO05D007660 1.5e-12 75.9 63 71.4
BcaC09g47961 Brassica carinata HOM05D006191 ORTHO05D007660 2.0e-12 75.5 65 72.3
PRCOL_00002293 Prasinoderma coloniale HOM05D006191 ORTHO05D007660 1.7e-11 72.4 72 48.6
Rhsim01G0194500 Rhododendron simsii HOM05D000189 ORTHO05D000474 4.1e-10 67.8 39 76.9
VMungo1080G0693 Vigna mungo HOM05D006191 ORTHO05D007660 3.2e-07 58.2 114 46.5
FAN11G1162 Fragaria x ananassa HOM05D006191 ORTHO05D007660 5.5e-07 57.4 116 41.4


User provided reference genes

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