Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G268200 Prunus persica HOM05D007423 ORTHO05D009091 9.8e-49 196.4 96 100.0
Prupe.1G423100 Prunus persica HOM05D007423 ORTHO05D009091 1.9e-15 85.9 50 84.0
COL.COLO4_28509 Corchorus olitorius HOM05D007423 ORTHO05D009091 9.2e-15 83.6 86 54.7
Thecc.08G089100 Theobroma cacao HOM05D007423 ORTHO05D009091 2.1e-14 82.4 86 55.8
Duzib093G1102 Durio zibethinus HOM05D007423 ORTHO05D009091 2.7e-14 82.0 48 81.2
Duzib041G0474 Durio zibethinus HOM05D007423 ORTHO05D009091 4.6e-14 81.3 50 78.0
Duzib116G0599 Durio zibethinus HOM05D007423 ORTHO05D009091 5.1e-13 77.8 50 74.0
FAN15G1020 Fragaria x ananassa HOM05D007423 ORTHO05D009091 1.5e-12 76.3 53 73.6
FvH4_2g33130 Fragaria vesca HOM05D007423 ORTHO05D009091 2.5e-12 75.5 53 73.6
TWI56G0135 Tripterygium wilfordii HOM05D007423 ORTHO05D009091 2.5e-12 75.5 53 66.0
Gohir.A05G209900 Gossypium hirsutum HOM05D007423 ORTHO05D009091 4.3e-12 74.7 51 70.6
Gohir.D05G213200 Gossypium hirsutum HOM05D007423 ORTHO05D009091 4.3e-12 74.7 66 62.1
Gorai.009G219800 Gossypium raimondii HOM05D007423 ORTHO05D009091 4.3e-12 74.7 66 62.1
QL12p038053 Quercus lobata HOM05D007423 ORTHO05D009091 5.6e-12 74.3 52 73.1
Cfa013780 Carpinus fangiana HOM05D007423 ORTHO05D009091 7.3e-12 73.9 61 65.6
Cfa013781 Carpinus fangiana HOM05D007423 ORTHO05D009091 7.3e-12 73.9 61 65.6
FAN27G2505 Fragaria x ananassa HOM05D007423 ORTHO05D009091 7.3e-12 73.9 53 71.7
FAN24G2841 Fragaria x ananassa HOM05D007423 ORTHO05D009091 1.6e-11 72.8 53 71.7
Cpa.g.c34911 Carica papaya HOM05D007423 ORTHO05D009091 3.6e-11 71.6 86 46.5
Haze_22440 Corylus avellana HOM05D007423 ORTHO05D009091 3.6e-11 71.6 61 63.9
RcHm_v2.0_Chr6g0309541 Rosa chinensis HOM05D007423 ORTHO05D009091 1.1e-10 70.1 51 72.5
TWI12G0330 Tripterygium wilfordii HOM05D007423 ORTHO05D009091 1.1e-10 70.1 53 58.5
Dinv44955 Davidia involucrata HOM05D007423 ORTHO05D009091 1.4e-10 69.7 69 58.0
ClCG08G016460 Citrullus lanatus HOM05D007423 ORTHO05D009091 1.8e-10 69.3 51 66.7
MELO3C010807.2 Cucumis melo HOM05D007423 ORTHO05D009091 2.4e-10 68.9 50 68.0
CsaV3_2G026150 Cucumis sativus L. HOM05D007423 ORTHO05D009091 2.4e-10 68.9 50 68.0
Manes.18G046400 Manihot esculenta HOM05D007423 ORTHO05D009091 3.1e-10 68.6 51 66.7
MD08G1084200 Malus domestica HOM05D007423 ORTHO05D009091 5.2e-10 67.8 51 64.7
Glyma.04G045200 Glycine max HOM05D007423 ORTHO05D009091 8.9e-10 67.0 87 49.4
Lalb_Chr22g0355601 Lupinus albus HOM05D007423 ORTHO05D009091 8.9e-10 67.0 52 69.2
Medtr1g018140 Medicago truncatula HOM05D007423 ORTHO05D009091 8.9e-10 67.0 87 51.7
Sabra02G0093200 Salix brachista HOM05D007423 ORTHO05D009091 1.2e-09 66.6 49 69.4
TPR.G3793 Trifolium pratense HOM05D007423 ORTHO05D009091 1.5e-09 66.2 67 62.7
CiPaw.07G175100 Carya illinoinensis HOM05D007423 ORTHO05D009091 2.0e-09 65.9 58 62.1
Lj5g0013479 Lotus japonicus HOM05D007423 ORTHO05D009091 2.6e-09 65.5 85 51.8
Ciclev10001602m.g Citrus clementina HOM05D007423 ORTHO05D009091 3.4e-09 65.1 51 62.7
Gohir.D06G021200 Gossypium hirsutum HOM05D007423 ORTHO05D009091 5.8e-09 64.3 50 64.0
Gorai.010G025800 Gossypium raimondii HOM05D007423 ORTHO05D009091 5.8e-09 64.3 50 64.0
VMungo0647G0208 Vigna mungo HOM05D007423 ORTHO05D009091 1.3e-08 63.2 93 44.1
Hma1.2p1_0819F.1_g223720 Hydrangea macrophylla HOM05D007423 ORTHO05D009091 1.7e-08 62.8 75 58.7
Manes.05G181850 Manihot esculenta HOM05D007423 ORTHO05D009091 1.7e-08 62.8 64 59.4
Potri.014G016200 Populus trichocarpa HOM05D007423 ORTHO05D009091 2.2e-08 62.4 64 59.4
CSS0004105 Camellia sinensis var. sinensis HOM05D007423 ORTHO05D009091 2.9e-08 62.0 54 61.1
CSS0046798 Camellia sinensis var. sinensis HOM05D007423 ORTHO05D009091 2.9e-08 62.0 54 61.1
Glyma.06G045700 Glycine max HOM05D007423 ORTHO05D009091 2.9e-08 62.0 91 48.4
Actinidia10198 Actinidia chinensis HOM05D007423 ORTHO05D009091 3.8e-08 61.6 52 61.5
Eucgr.F00082 Eucalyptus grandis HOM05D007423 ORTHO05D009091 3.8e-08 61.6 48 64.6
Potri.002G118700 Populus trichocarpa HOM05D007423 ORTHO05D009091 3.8e-08 61.6 67 55.2
Glyma.14G088700 Glycine max HOM05D007423 ORTHO05D009091 4.9e-08 61.2 53 64.2
TAR381G1462 Trochodendron aralioides HOM05D007423 ORTHO05D009091 8.4e-08 60.5 60 60.0
Lsat_1_v5_gn_6_110881 Lactuca sativa HOM05D007423 ORTHO05D009091 1.1e-07 60.1 52 61.5
Phvul.001G027100 Phaseolus vulgaris HOM05D007423 ORTHO05D009091 1.4e-07 59.7 62 56.5
Gohir.A06G024100 Gossypium hirsutum HOM05D007423 ORTHO05D009091 1.9e-07 59.3 52 61.5
MD15G1070300 Malus domestica HOM05D007423 ORTHO05D009091 1.9e-07 59.3 47 63.8
Sopen04g031440 Solanum pennellii HOM05D007423 ORTHO05D009091 2.4e-07 58.9 52 61.5
MSTRG.25038 Avicennia marina HOM05D007423 ORTHO05D009091 3.2e-07 58.5 52 59.6
Cc10_g05770 Coffea canephora HOM05D007423 ORTHO05D009091 4.2e-07 58.2 54 64.8
Phvul.009G071100 Phaseolus vulgaris HOM05D007423 ORTHO05D009091 4.2e-07 58.2 96 42.7
VMungo1309G2697 Vigna mungo HOM05D007423 ORTHO05D009091 5.4e-07 57.8 57 56.1
Atru.chr13.827 Acer truncatum HOM05D007423 ORTHO05D009091 7.1e-07 57.4 50 64.0
GSVIVG01009345001 Vitis vinifera HOM05D007423 ORTHO05D009091 9.3e-07 57.0 61 57.4
Actinidia22694 Actinidia chinensis HOM05D007423 ORTHO05D009091 1.2e-06 56.6 52 57.7
CAN.G724.25 Capsicum annuum HOM05D007423 ORTHO05D009091 1.2e-06 56.6 54 57.4
CANSAT25G1658 Cannabis sativa HOM05D007423 ORTHO05D009091 2.7e-06 55.5 52 59.6
Nn5g30581 Nelumbo nucifera HOM05D007423 ORTHO05D009091 6.0e-06 54.3 58 55.2
Oeu053610.1 Olea europaea HOM05D007423 ORTHO05D009091 7.8e-06 53.9 52 53.8
Rhsim07G0220000 Rhododendron simsii HOM05D007423 ORTHO05D009091 7.8e-06 53.9 52 57.7


User provided reference genes

Program Settings