Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G260600 Prunus persica HOM05D002733 ORTHO05D010023 5.3e-226 787.3 395 100.0
MD03G1164300 Malus domestica HOM05D002733 ORTHO05D010023 1.2e-108 397.5 400 61.0
MD00G1045800 Malus domestica HOM05D002733 ORTHO05D010023 1.9e-106 390.2 399 59.4
Cfa009898 Carpinus fangiana HOM05D002733 ORTHO05D010023 4.2e-53 213.0 405 41.7
FAN15G1799 Fragaria x ananassa HOM05D002733 ORTHO05D010023 4.6e-52 209.5 409 40.8
RcHm_v2.0_Chr6g0258931 Rosa chinensis HOM05D002733 ORTHO05D010023 6.0e-52 209.1 407 40.5
FAN20G0750 Fragaria x ananassa HOM05D002733 ORTHO05D010023 4.3e-50 203.0 411 40.4
FAN27G2498 Fragaria x ananassa HOM05D002733 ORTHO05D010023 2.8e-49 200.3 402 39.6
Haze_23259 Corylus avellana HOM05D002733 ORTHO05D003856 8.1e-49 198.7 417 39.3
FvH4_2g06740 Fragaria vesca HOM05D002733 ORTHO05D010023 8.1e-49 198.7 408 39.5
FAN24G3374 Fragaria x ananassa HOM05D002733 ORTHO05D010023 1.1e-48 198.4 409 39.4
CiPaw.13G148700 Carya illinoinensis HOM05D002733 ORTHO05D010023 1.2e-47 194.9 414 39.4
QL01p016685 Quercus lobata HOM05D002733 ORTHO05D010023 1.2e-47 194.9 422 38.4
Thecc.09G246300 Theobroma cacao HOM05D002733 ORTHO05D010023 1.5e-47 194.5 440 37.5
Dinv04578 Davidia involucrata HOM05D002733 ORTHO05D010023 1.8e-40 171.0 403 38.0
Psat0s1289g0080 Pisum sativum HOM05D002733 ORTHO05D010023 1.1e-37 161.8 420 36.4
Gorai.001G135300 Gossypium raimondii HOM05D002733 ORTHO05D010023 7.1e-37 159.1 394 34.0
Gohir.D07G125500 Gossypium hirsutum HOM05D002733 ORTHO05D010023 9.3e-37 158.7 394 34.3
LjContig00564g0023278 Lotus japonicus HOM05D002733 ORTHO05D010023 1.6e-36 157.9 400 36.5
Manes.05G200100 Manihot esculenta HOM05D002733 ORTHO05D010023 3.5e-36 156.8 411 34.5
Potri.001G274000 Populus trichocarpa HOM05D002733 ORTHO05D010023 4.6e-36 156.4 402 34.3
Gohir.A07G121200 Gossypium hirsutum HOM05D002733 ORTHO05D010023 1.3e-35 154.8 396 34.1
Manes.02G136900 Manihot esculenta HOM05D002733 ORTHO05D010023 6.7e-35 152.5 425 32.2
Medtr5g089100 Medicago truncatula HOM05D002733 ORTHO05D010023 1.1e-34 151.8 412 35.7
Ciclev10017459m.g Citrus clementina HOM05D002733 ORTHO05D010023 2.4e-32 144.1 402 33.8
Sabra16G0168800 Salix brachista HOM05D002733 ORTHO05D010023 1.2e-31 141.7 414 33.1
Potri.009G068200 Populus trichocarpa HOM05D002733 ORTHO05D010023 2.0e-31 141.0 378 33.9
Lalb_Chr10g0106141 Lupinus albus HOM05D002733 ORTHO05D010023 2.2e-30 137.5 371 36.9
Glyma.14G036400 Glycine max HOM05D002733 ORTHO05D010023 2.9e-30 137.1 403 35.0
TAR369G1143 Trochodendron aralioides HOM05D002733 ORTHO05D010023 2.9e-30 137.1 386 34.7
Atru.chr3.3004 Acer truncatum HOM05D002733 ORTHO05D010023 4.9e-30 136.3 428 32.5
Phvul.008G165900 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 4.9e-30 136.3 344 37.8
Dinv36151 Davidia involucrata HOM05D002733 ORTHO05D010023 1.4e-29 134.8 346 37.0
Phvul.008G202700 Phaseolus vulgaris HOM05D002733 ORTHO05D010023 1.9e-29 134.4 258 44.6
TPR.G16419 Trifolium pratense HOM05D002733 ORTHO05D010023 1.9e-29 134.4 403 34.0
Hma1.2p1_0460F.1_g157570 Hydrangea macrophylla HOM05D002733 ORTHO05D010023 3.2e-29 133.7 401 34.4
CANSAT54G1196 Cannabis sativa HOM05D002733 ORTHO05D010023 2.1e-28 131.0 400 32.0
Glyma.02G278200 Glycine max HOM05D002733 ORTHO05D010023 3.5e-28 130.2 299 38.1
arahy.Tifrunner.gnm1.ann1.88337C Arachis hypogaea HOM05D002733 ORTHO05D010023 7.9e-28 129.0 407 32.7
COL.COLO4_02755 Corchorus olitorius HOM05D002733 ORTHO05D010023 3.9e-27 126.7 430 30.5
Eucgr.J00677 Eucalyptus grandis HOM05D002733 ORTHO05D010023 1.1e-26 125.2 406 32.3
arahy.Tifrunner.gnm1.ann1.MI3W0U Arachis hypogaea HOM05D002733 ORTHO05D010023 1.5e-26 124.8 406 31.8
Ca_06190_v3 Cicer arietinum L. HOM05D002733 ORTHO05D010023 1.3e-25 121.7 200 45.5
Sed0027264 Sechium edule HOM05D002733 ORTHO05D010023 1.3e-25 121.7 259 35.9
TWI79G0642 Tripterygium wilfordii HOM05D002733 ORTHO05D010023 6.9e-24 115.9 386 30.8
CsaV3_6G038850 Cucumis sativus L. HOM05D002733 ORTHO05D010023 1.5e-23 114.8 263 35.4
Migut.D00675 Erythranthe guttata HOM05D002733 ORTHO05D010023 7.6e-23 112.5 391 31.5
MSTRG.18469 Avicennia marina HOM05D002733 ORTHO05D010023 1.7e-22 111.3 412 31.8
ClCG02G022730 Citrullus lanatus HOM05D002733 ORTHO05D010023 8.4e-22 109.0 244 34.4
VMungo0647G1446 Vigna mungo HOM05D002733 ORTHO05D010023 8.4e-22 109.0 397 31.5
DCAR_029984 Daucus carota HOM05D002733 ORTHO05D010023 1.4e-21 108.2 379 30.3
Peaxi162Scf00004g00424 Petunia axillaris HOM05D018239 ORTHO05D010023 3.2e-21 107.1 402 29.4
MELO3C014550.2 Cucumis melo HOM05D002733 ORTHO05D010023 5.5e-21 106.3 247 36.0
Nitab4.5_0007012g0030 Nicotiana tabacum HOM05D018239 ORTHO05D010023 1.6e-20 104.8 404 28.2
Oeu025912.1 Olea europaea HOM05D002733 ORTHO05D010023 3.5e-20 103.6 410 30.7
Actinidia06978 Actinidia chinensis HOM05D002733 ORTHO05D010023 1.9e-18 97.8 270 34.8
Dinv36152 Davidia involucrata HOM05D000362 ORTHO05D000325 4.1e-16 90.1 173 40.5
AUR62000212 Chenopodium quinoa HOM05D002733 ORTHO05D010023 6.9e-16 89.4 247 32.4
AUR62006558 Chenopodium quinoa HOM05D002733 ORTHO05D010023 1.2e-15 88.6 233 33.9
PGR119G1676 Punica granatum HOM05D002733 ORTHO05D010023 3.4e-15 87.0 262 34.4
PGSC0003DMG400009447 Solanum tuberosum HOM05D018239 ORTHO05D010023 1.3e-14 85.1 408 27.2
PGR102G0853 Punica granatum HOM05D002733 ORTHO05D010023 6.5e-14 82.8 351 28.2
Sopen11g024780 Solanum pennellii HOM05D018239 ORTHO05D010023 8.5e-14 82.4 407 28.0
TAR633G0275 Trochodendron aralioides HOM05D002733 ORTHO05D010023 8.5e-14 82.4 181 39.8
ECA238G3721 Erigeron canadensis HOM05D002733 ORTHO05D010023 1.1e-13 82.0 331 26.6
Nitab4.5_0006764g0040 Nicotiana tabacum HOM05D018239 ORTHO05D010023 4.2e-13 80.1 406 27.6
Sabra09G0051300 Salix brachista HOM05D002733 ORTHO05D010023 4.2e-13 80.1 88 53.4
Lsat_1_v5_gn_2_32340 Lactuca sativa HOM05D002733 ORTHO05D010023 7.2e-13 79.3 188 35.1
Aqoxy2G00438 Aquilegia oxysepala HOM05D002733 ORTHO05D010023 1.2e-12 78.6 401 28.7
CAN.G468.8 Capsicum annuum HOM05D018239 ORTHO05D010023 1.2e-12 78.6 407 27.3
Solyc11g065010.1 Solanum lycopersicum HOM05D018239 ORTHO05D010023 1.2e-12 78.6 397 27.0
Rhsim13G0206300 Rhododendron simsii HOM05D002733 ORTHO05D010023 1.4e-11 75.1 202 32.2
Lsat_1_v5_gn_2_32520 Lactuca sativa HOM05D002733 ORTHO05D010023 3.0e-11 73.9 187 34.8
MBI13_g09212_MAGBIO Magnolia biondii HOM05D002733 ORTHO05D010023 3.0e-11 73.9 397 27.7
Ah.06g194720 Amaranthus hybridus HOM05D002733 ORTHO05D010023 3.9e-11 73.6 250 30.8
SGA_v2.0_scaffold29G12225 Striga asiatica HOM05D002733 ORTHO05D010023 7.4e-10 69.3 146 40.4
ATR0307G041 Amborella trichopoda HOM05D002733 ORTHO05D010023 3.7e-09 67.0 195 35.9
Sc16g0010940 Simmondsia chinensis HOM05D002733 ORTHO05D010023 8.2e-09 65.9 92 47.8
HPP92_022826 Vanilla planifolia HOM05D002733 ORTHO05D010023 2.0e-07 61.2 84 44.0
HanXRQChr03g0090311 Helianthus annuus HOM05D002733 ORTHO05D010023 5.9e-07 59.7 193 33.2
Dinv41084 Davidia involucrata HOM05D002733 ORTHO05D010023 2.9e-06 57.4 122 41.8
Lsat_1_v5_gn_3_109980 Lactuca sativa HOM05D002733 ORTHO05D010023 6.5e-06 56.2 143 34.3


User provided reference genes

Program Settings