Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G260500 Prunus persica HOM05D002956 ORTHO05D009000 5.3e-108 394.4 208 100.0
CiPaw.13G148600 Carya illinoinensis HOM05D002956 ORTHO05D009000 3.9e-50 202.2 156 64.1
Sed0027603 Sechium edule HOM05D002956 ORTHO05D009000 1.7e-42 176.8 162 56.2
RcHm_v2.0_Chr5g0050271 Rosa chinensis HOM05D002956 ORTHO05D009000 1.5e-41 173.7 144 70.1
MD00G1148000 Malus domestica HOM05D002956 ORTHO05D009000 2.1e-40 169.9 150 68.7
MD00G1134800 Malus domestica HOM05D002956 ORTHO05D009000 8.1e-40 167.9 154 65.6
Dinv04582 Davidia involucrata HOM05D000102 ORTHO05D000138 2.9e-37 159.5 122 67.2
CSS0047298 Camellia sinensis var. sinensis HOM05D002956 ORTHO05D009000 8.3e-37 157.9 142 61.3
TAR633G2508 Trochodendron aralioides HOM05D002956 ORTHO05D009000 8.3e-37 157.9 105 71.4
Actinidia06979 Actinidia chinensis HOM05D002956 ORTHO05D009000 3.5e-35 152.5 124 66.1
Rhsim13G0206200 Rhododendron simsii HOM05D002956 ORTHO05D009000 1.0e-34 151.0 108 70.4
FvH4_2g35650 Fragaria vesca HOM05D002956 ORTHO05D009000 1.7e-34 150.2 145 61.4
FAN27G0310 Fragaria x ananassa HOM05D002956 ORTHO05D009000 1.1e-33 147.5 145 60.7
Nn7g36832 Nelumbo nucifera HOM05D002956 ORTHO05D009000 1.5e-33 147.1 108 65.7
Potri.009G068300 Populus trichocarpa HOM05D002956 ORTHO05D009000 1.9e-33 146.7 141 59.6
FAN15G3287 Fragaria x ananassa HOM05D002956 ORTHO05D009000 4.3e-33 145.6 145 59.3
FAN20G2737 Fragaria x ananassa HOM05D002956 ORTHO05D009000 4.3e-33 145.6 145 60.0
FAN22G1360 Fragaria x ananassa HOM05D002956 ORTHO05D009000 5.6e-33 145.2 145 60.0
Haze_23260 Corylus avellana HOM05D002956 ORTHO05D009000 9.5e-33 144.4 151 55.6
Sabra09G0051400 Salix brachista HOM05D002956 ORTHO05D009000 4.7e-32 142.1 141 56.7
Cfa009899 Carpinus fangiana HOM05D002956 ORTHO05D009000 1.1e-31 141.0 147 55.1
CANSAT54G2237 Cannabis sativa HOM05D002956 ORTHO05D009000 3.1e-31 139.4 152 48.7
Thecc.09G246200 Theobroma cacao HOM05D002956 ORTHO05D009000 4.0e-31 139.0 146 54.1
Manes.02G137000 Manihot esculenta HOM05D002956 ORTHO05D009000 6.8e-31 138.3 115 62.6
Phvul.005G020500 Phaseolus vulgaris HOM05D002956 ORTHO05D009000 1.5e-30 137.1 140 53.6
Gohir.A05G073600 Gossypium hirsutum HOM05D002956 ORTHO05D009000 2.0e-30 136.7 138 55.8
Hma1.2p1_0460F.1_g157580 Hydrangea macrophylla HOM05D002956 ORTHO05D009000 3.4e-30 136.0 147 54.4
Gohir.D05G076500 Gossypium hirsutum HOM05D002956 ORTHO05D009000 5.8e-30 135.2 138 55.1
Gorai.009G077800 Gossypium raimondii HOM05D002956 ORTHO05D009000 5.8e-30 135.2 138 55.1
CiPaw.14G111100 Carya illinoinensis HOM05D002956 ORTHO05D009000 7.6e-30 134.8 122 59.0
Lj6g0021242 Lotus japonicus HOM05D002956 ORTHO05D009000 1.3e-29 134.0 133 55.6
VMungo1080G0193 Vigna mungo HOM05D002956 ORTHO05D009000 4.9e-29 132.1 106 61.3
Duzib150G0064 Durio zibethinus HOM05D002956 ORTHO05D009000 6.4e-29 131.7 174 47.1
COL.COLO4_07383 Corchorus olitorius HOM05D002956 ORTHO05D009000 8.4e-29 131.3 147 54.4
CsaV3_6G038840 Cucumis sativus L. HOM05D002956 ORTHO05D009000 1.9e-28 130.2 112 61.6
Aqoxy2G00440 Aquilegia oxysepala HOM05D002956 ORTHO05D009000 4.2e-28 129.0 107 58.9
Glyma.15G273500 Glycine max HOM05D002956 ORTHO05D009000 4.2e-28 129.0 106 59.4
PGR102G2739 Punica granatum HOM05D002956 ORTHO05D009000 9.2e-28 127.9 120 55.8
Migut.D00676 Erythranthe guttata HOM05D002956 ORTHO05D009000 4.6e-27 125.6 122 55.7
Glyma.08G154600 Glycine max HOM05D002956 ORTHO05D009000 7.8e-27 124.8 105 60.0
MBI19_g19212_MAGBIO Magnolia biondii HOM05D002956 ORTHO05D009000 7.8e-27 124.8 113 58.4
MELO3C014549.2 Cucumis melo HOM05D002956 ORTHO05D009000 1.3e-26 124.0 148 51.4
DCAR_006895 Daucus carota HOM05D002956 ORTHO05D009000 1.3e-26 124.0 139 48.9
Aa31LG5G8950 Aethionema arabicum HOM05D002956 ORTHO05D009000 3.0e-26 122.9 138 52.9
Cpa.g.sc34.182 Carica papaya HOM05D002956 ORTHO05D009000 3.0e-26 122.9 99 64.6
Lalb_Chr15g0078501 Lupinus albus HOM05D002956 ORTHO05D009000 3.0e-26 122.9 148 48.0
Ciclev10016188m.g Citrus clementina HOM05D002956 ORTHO05D009000 5.1e-26 122.1 114 56.1
HPP92_025063 Vanilla planifolia HOM05D002956 ORTHO05D009000 8.7e-26 121.3 109 53.2
PSO384G3893 Papaver somniferum HOM05D002956 ORTHO05D009000 1.1e-25 120.9 141 48.2
CDE08G0764 Ceratophyllum demersum HOM05D002956 ORTHO05D009000 1.5e-25 120.6 115 53.0
Solyc01g008700.4 Solanum lycopersicum HOM05D002956 ORTHO05D009000 1.5e-25 120.6 144 52.1
PSO339G4249 Papaver somniferum HOM05D002956 ORTHO05D009000 2.5e-25 119.8 141 48.2
Peaxi162Scf00032g02025 Petunia axillaris HOM05D002956 ORTHO05D009000 2.5e-25 119.8 117 57.3
Sopen01g004220 Solanum pennellii HOM05D002956 ORTHO05D009000 2.5e-25 119.8 144 52.1
Cc01_g06260 Coffea canephora HOM05D002956 ORTHO05D009000 3.3e-25 119.4 124 51.6
Duzib168G2273 Durio zibethinus HOM05D002956 ORTHO05D009000 3.3e-25 119.4 99 58.6
SalBow6G2483 Salvia bowleyana HOM05D002956 ORTHO05D009000 3.3e-25 119.4 114 61.4
Lsat_1_v5_gn_5_63121 Lactuca sativa HOM05D002956 ORTHO05D009000 4.3e-25 119.0 123 54.5
Atru.chr3.2859 Acer truncatum HOM05D002956 ORTHO05D009000 5.6e-25 118.6 147 48.3
Eucgr.B03751 Eucalyptus grandis HOM05D002956 ORTHO05D009000 5.6e-25 118.6 100 62.0
PGSC0003DMG400004431 Solanum tuberosum HOM05D002956 ORTHO05D009000 1.6e-24 117.1 123 55.3
Oeu027216.2 Olea europaea HOM05D002956 ORTHO05D009000 2.1e-24 116.7 122 55.7
Medtr3g437110 Medicago truncatula HOM05D002956 ORTHO05D009000 2.8e-24 116.3 142 47.2
arahy.Tifrunner.gnm1.ann1.NKUQ81 Arachis hypogaea HOM05D002956 ORTHO05D009000 4.7e-24 115.5 109 58.7
QL01p016676 Quercus lobata HOM05D002956 ORTHO05D009000 4.7e-24 115.5 150 49.3
ATR0307G004 Amborella trichopoda HOM05D002956 ORTHO05D009000 6.2e-24 115.2 104 52.9
Migut.N02380 Erythranthe guttata HOM05D002956 ORTHO05D009000 1.8e-23 113.6 121 53.7
THA.LOC104826457 Tarenaya hassleriana HOM05D002956 ORTHO05D009000 1.8e-23 113.6 116 55.2
arahy.Tifrunner.gnm1.ann1.UED96S Arachis hypogaea HOM05D002956 ORTHO05D009000 3.1e-23 112.8 109 56.9
GSVIVG01037339001 Vitis vinifera HOM05D002956 ORTHO05D009000 3.1e-23 112.8 76 69.7
Ca_26337_v3 Cicer arietinum L. HOM05D002956 ORTHO05D009000 4.0e-23 112.5 105 54.3
Sc16g0010930 Simmondsia chinensis HOM05D002956 ORTHO05D009000 4.0e-23 112.5 146 47.9
Sp4g08630 Schrenkiella parvula HOM05D002956 ORTHO05D009000 5.3e-23 112.1 145 48.3
CARHR119020 Cardamine hirsuta HOM05D002956 ORTHO05D009000 6.9e-23 111.7 145 48.3
Nitab4.5_0006687g0010 Nicotiana tabacum HOM05D002956 ORTHO05D000001 6.9e-23 111.7 143 47.6
Carub.0004s0731 Capsella rubella HOM05D002956 ORTHO05D009000 9.0e-23 111.3 144 47.2
Thhalv10002070m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 9.0e-23 111.3 145 50.3
SGA_v2.0_scaffold29G12222 Striga asiatica HOM05D002956 ORTHO05D009000 2.0e-22 110.2 124 53.2
EL10Ac4g10093 Beta vulgaris HOM05D002956 ORTHO05D009000 4.4e-22 109.0 106 55.7
BcaB01g03033 Brassica carinata HOM05D002956 ORTHO05D008031 5.8e-22 108.6 145 47.6
unitig_8.g3652 Utricularia gibba HOM05D002956 ORTHO05D009000 5.8e-22 108.6 127 51.2
TWI31G1447 Tripterygium wilfordii HOM05D002956 ORTHO05D009000 7.6e-22 108.2 135 48.1
AL4G20050 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 9.9e-22 107.8 144 47.9
MSTRG.17638 Avicennia marina HOM05D002956 ORTHO05D009000 1.3e-21 107.5 125 54.4
Psat5g240480 Pisum sativum HOM05D002956 ORTHO05D009000 1.3e-21 107.5 105 53.3
TPR.G11887 Trifolium pratense HOM05D002956 ORTHO05D009000 2.9e-21 106.3 105 52.4
Ah.06g194750 Amaranthus hybridus HOM05D002956 ORTHO05D009000 4.9e-21 105.5 104 53.8
A03p26830 Brassica napus HOM05D002956 ORTHO05D008031 2.4e-20 103.2 146 45.2
BraA03t11895Z Brassica rapa HOM05D002956 ORTHO05D008031 2.4e-20 103.2 146 45.2
AUR62006560 Chenopodium quinoa HOM05D002956 ORTHO05D009000 2.4e-20 103.2 154 46.1
BcaC01g04913 Brassica carinata HOM05D002956 ORTHO05D008031 4.2e-20 102.4 138 47.1
C03p32170 Brassica napus HOM05D002956 ORTHO05D008031 4.2e-20 102.4 138 47.1
BolC3t15559H Brassica oleracea HOM05D002956 ORTHO05D008031 4.2e-20 102.4 146 45.9
AUR62000215 Chenopodium quinoa HOM05D002956 ORTHO05D009000 1.6e-19 100.5 154 42.9
ClCG02G022720 Citrullus lanatus HOM05D002956 ORTHO05D009000 1.6e-19 100.5 120 49.2
ECA233G2896 Erigeron canadensis HOM05D000003 ORTHO05D009000 4.6e-19 99.0 67 67.2
HanXRQChr12g0380431 Helianthus annuus HOM05D002956 ORTHO05D009000 4.6e-19 99.0 102 48.0
Thhalv10002099m.g Eutrema salsugineum HOM05D002956 ORTHO05D009000 4.3e-17 92.4 72 68.1
Nitab4.5_0000390g0150 Nicotiana tabacum HOM05D002956 ORTHO05D009000 6.9e-15 85.1 101 45.5
AT2G26840 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 9.0e-15 84.7 200 34.0
vmacro04046 Vaccinium macrocarpon HOM05D002956 ORTHO05D009000 1.5e-14 84.0 82 56.1
Os01g0268900 Oryza sativa ssp. japonica HOM05D002956 ORTHO05D009000 1.7e-13 80.5 101 44.6
Zm00001eb128680 Zea mays HOM05D002956 ORTHO05D009000 2.9e-13 79.7 101 42.6
CARHR035860 Cardamine hirsuta HOM05D002956 ORTHO05D009000 5.4e-12 75.5 104 41.3
AL5G21910 Arabidopsis lyrata HOM05D002956 ORTHO05D009000 6.0e-11 72.0 86 41.9
AT3G43910 Arabidopsis thaliana HOM05D002956 ORTHO05D009000 7.9e-11 71.6 86 41.9
SMO367G0391 Selaginella moellendorffii HOM05D002956 ORTHO05D009000 1.8e-10 70.5 99 38.4
Oeu027210.1 Olea europaea HOM05D002956 ORTHO05D009000 2.8e-08 63.2 81 50.6
Pp3c23_20070 Physcomitrium patens HOM05D002956 ORTHO05D009000 1.8e-07 60.5 117 33.3
Mapoly0206s0003 Marchantia polymorpha HOM05D002956 ORTHO05D009000 2.4e-07 60.1 67 40.3
CBR_g32285 Chara braunii HOM05D002956 ORTHO05D009000 1.5e-06 57.4 61 39.3


User provided reference genes

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