Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G238700 Prunus persica HOM05D000002 ORTHO05D000001 2.9e-73 278.5 144 100.0
Prupe.8G084200 Prunus persica HOM05D000002 ORTHO05D000001 6.0e-26 121.3 111 56.8
FvH4_2g23291 Fragaria vesca HOM05D000002 ORTHO05D000001 1.8e-22 109.8 111 53.2
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 4.0e-22 108.6 112 57.1
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 9.0e-22 107.5 111 47.7
MD14G1189500 Malus domestica HOM05D000002 ORTHO05D000001 2.0e-21 106.3 108 50.9
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 2.6e-21 105.9 111 47.7
MD02G1010600 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-20 103.6 111 51.4
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-20 103.2 111 51.4
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 1.7e-20 103.2 112 50.9
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 2.2e-20 102.8 111 45.9
FvH4_4g33449 Fragaria vesca HOM05D000002 ORTHO05D000001 2.9e-20 102.4 111 48.6
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.8e-20 102.1 107 51.4
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 3.8e-20 102.1 111 45.9
MD05G1320000 Malus domestica HOM05D000002 ORTHO05D000001 6.4e-20 101.3 111 48.6
Hma1.2p1_0903F.1_g234920 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-19 100.1 112 48.2
MD03G1056000 Malus domestica HOM05D000002 ORTHO05D000001 4.2e-19 98.6 111 44.1
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.1e-19 97.8 108 49.1
Hma1.2p1_0299F.1_g117780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.3e-19 97.4 111 46.8
Hma1.2p1_0158F.1_g069590 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-18 97.1 112 48.2
Prupe.8G080900 Prunus persica HOM05D000002 ORTHO05D000001 2.1e-18 96.3 89 59.6
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 2.1e-18 96.3 112 49.1
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 3.5e-18 95.5 112 42.9
MD15G1119400 Malus domestica HOM05D000056 ORTHO05D000001 6.0e-18 94.7 111 46.8
Hma1.2p1_2469F.1_g322690 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.0e-17 94.0 112 47.3
Hma1.2p1_0840F.1_g226720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-17 93.6 112 45.5
Hma1.2p1_1768F.1_g301510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-17 93.6 112 45.5
Hma1.2p1_3787F.1_g337595 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-17 93.6 112 45.5
Hma1.2p1_3787F.1_g337600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.3e-17 93.6 112 45.5
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-17 93.6 111 47.7
MD12G1254500 Malus domestica HOM05D002861 ORTHO05D003104 2.3e-17 92.8 111 41.4
Prupe.3G026300 Prunus persica HOM05D000002 ORTHO05D000001 3.9e-17 92.0 91 53.8
RcHm_v2.0_Chr2g0101531 Rosa chinensis HOM05D000002 ORTHO05D000001 6.6e-17 91.3 105 46.7
Hma1.2p1_0134F.1_g061510 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-16 90.5 112 44.6
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 1.5e-16 90.1 112 47.3
Hma1.2p1_0090F.1_g045570 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 5.6e-16 88.2 112 42.9
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-15 86.7 111 38.7
MD12G1254700 Malus domestica HOM05D002861 ORTHO05D003104 3.6e-15 85.5 111 42.3
Lj9C524G4 Lonicera japonica HOM05D000002 ORTHO05D000001 6.2e-15 84.7 112 41.1
Prupe.2G074700 Prunus persica HOM05D000002 ORTHO05D000001 6.2e-15 84.7 109 44.0
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 3.1e-14 82.4 109 41.3
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 5.3e-14 81.6 130 38.5
Atru.chr9.1622 Acer truncatum HOM05D000002 ORTHO05D000001 6.9e-14 81.3 130 38.5
Atru.chr9.1623 Acer truncatum HOM05D000002 ORTHO05D000001 6.9e-14 81.3 130 38.5
Hma1.2p1_0951F.1_g240790 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.9e-14 81.3 112 40.2
Atru.chr11.281 Acer truncatum HOM05D000002 ORTHO05D000001 9.0e-14 80.9 107 43.0
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.5e-13 80.1 112 37.5
Hma1.2p1_0110F.1_g052720 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.6e-13 79.3 111 42.3
CANSAT21G1279 Cannabis sativa HOM05D000002 ORTHO05D000001 2.9e-12 75.9 109 36.7
Hma1.2p1_0240F.1_g100220 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.1e-11 73.9 113 38.1
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 4.2e-11 72.0 85 49.4
FvH4_1g00961 Fragaria vesca HOM05D000002 ORTHO05D000001 2.1e-10 69.7 54 61.1
FvH4_3g39581 Fragaria vesca HOM05D000002 ORTHO05D000001 2.1e-10 69.7 70 50.0
CANSAT54G2325 Cannabis sativa HOM05D000002 ORTHO05D000001 4.6e-10 68.6 99 34.3
Ciclev10030316m.g Citrus clementina HOM05D000002 ORTHO05D000001 1.8e-09 66.6 75 45.3
Prupe.8G185000 Prunus persica HOM05D000002 ORTHO05D000001 1.8e-09 66.6 88 40.9
MD04G1151700 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-08 63.9 62 50.0
Prupe.6G052200 Prunus persica HOM05D000002 ORTHO05D000001 2.5e-08 62.8 64 50.0
FvH4_6g20601 Fragaria vesca HOM05D000002 ORTHO05D000001 7.4e-08 61.2 53 54.7
MD12G1020900 Malus domestica HOM05D000103 ORTHO05D000001 2.8e-07 59.3 105 33.3
Hma1.2p1_1359F.1_g278060 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.7e-07 58.9 53 50.9
Prupe.8G185100 Prunus persica HOM05D000002 ORTHO05D000001 4.8e-07 58.5 89 40.4
Sopen05g011750 Solanum pennellii HOM05D000002 ORTHO05D000001 6.2e-07 58.2 104 31.7
Migut.F01917 Erythranthe guttata HOM05D000002 ORTHO05D000001 8.1e-07 57.8 104 30.8
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-06 57.0 110 30.0
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-06 56.2 111 27.9
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.4e-06 56.2 111 27.9
Sopen11g003490 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 104 31.7
Sopen11g022270 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 122 29.5
Sopen12g023510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.4e-06 56.2 104 31.7
ECA236G2445 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.1e-06 55.8 111 29.7
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-06 55.8 111 28.8
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 4.0e-06 55.5 109 26.6
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 5.3e-06 55.1 108 32.4
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.9e-06 54.7 111 30.6


User provided reference genes

Program Settings