Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 1.9e-83 312.4 153 100.0
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 1.1e-67 260.0 159 83.0
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 3.5e-64 248.4 159 78.6
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 8.8e-60 233.8 159 74.2
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 5.7e-59 231.1 159 73.0
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.2e-55 219.2 189 62.4
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.8e-55 218.4 189 62.4
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 1.5e-54 216.5 159 70.4
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 1.5e-54 216.5 159 69.2
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 1.9e-54 216.1 159 69.2
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 1.9e-54 216.1 159 69.2
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.9e-54 216.1 159 67.9
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 2.5e-54 215.7 189 61.4
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.5e-54 215.7 159 69.8
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 3.2e-54 215.3 159 70.4
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 5.5e-54 214.5 159 67.3
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 5.5e-54 214.5 159 67.3
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 7.2e-54 214.2 159 68.6
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 9.4e-54 213.8 159 70.4
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.7e-53 212.2 159 68.6
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 2.7e-53 212.2 159 68.6
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 2.7e-53 212.2 159 66.7
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 4.7e-53 211.5 159 66.0
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 4.7e-53 211.5 159 69.2
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 6.1e-53 211.1 159 68.6
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.4e-52 209.9 159 67.9
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 1.4e-52 209.9 159 66.7
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 2.3e-52 209.1 159 67.9
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 3.0e-52 208.8 159 67.9
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 3.0e-52 208.8 159 68.6
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 4.0e-52 208.4 159 67.9
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 5.2e-52 208.0 159 69.2
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 5.2e-52 208.0 159 69.8
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 6.8e-52 207.6 159 67.3
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 8.8e-52 207.2 159 67.9
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 2.0e-51 206.1 159 69.2
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 2.0e-51 206.1 159 67.3
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 2.0e-51 206.1 159 65.4
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 2.6e-51 205.7 159 66.7
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 2.6e-51 205.7 159 66.7
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 3.4e-51 205.3 159 66.7
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 4.4e-51 204.9 159 67.3
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 5.7e-51 204.5 159 66.0
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 5.7e-51 204.5 159 66.0
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 5.7e-51 204.5 159 64.8
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 9.8e-51 203.8 159 65.4
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 9.8e-51 203.8 159 65.4
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 9.8e-51 203.8 159 64.8
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.3e-50 203.4 159 65.4
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.3e-50 203.4 159 65.4
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 1.3e-50 203.4 159 66.0
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 1.7e-50 203.0 159 66.7
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.2e-50 202.6 159 64.2
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.2e-50 202.6 159 64.2
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 2.8e-50 202.2 159 66.0
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.1e-49 200.3 159 64.2
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 1.4e-49 199.9 159 64.2
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 1.8e-49 199.5 159 64.8
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 2.4e-49 199.1 159 63.5
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.4e-49 199.1 159 64.2
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 5.4e-49 198.0 186 57.5
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 5.4e-49 198.0 159 62.9
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 7.0e-49 197.6 183 60.1
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 9.1e-49 197.2 159 62.3
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 9.1e-49 197.2 159 64.2
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 2.0e-48 196.1 159 62.9
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 3.5e-48 195.3 159 62.3
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.3e-47 193.4 159 62.9
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 2.9e-47 192.2 159 63.5
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 3.8e-47 191.8 159 59.1
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 1.5e-46 189.9 159 63.5
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 1.5e-46 189.9 203 54.2
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 5.5e-46 188.0 159 59.1
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 7.2e-46 187.6 160 60.6
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.6e-45 186.4 159 57.9
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 1.0e-44 183.7 159 60.4
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 5.2e-44 181.4 183 56.8
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.3e-42 176.8 151 62.3
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 3.1e-41 172.2 135 63.7
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 1.6e-40 169.9 135 63.0
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 5.0e-39 164.9 123 70.7
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 2.6e-35 152.5 123 66.7
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 4.4e-35 151.8 122 63.9
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.0e-28 130.6 249 37.3
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 3.9e-07 58.9 160 28.8


User provided reference genes

Program Settings