Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 5.1e-196 687.6 348 100.0
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 2.9e-167 592.0 348 84.8
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 1.1e-137 493.8 347 72.6
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 1.4e-137 493.4 347 73.2
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 4.2e-134 481.9 342 71.9
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.6e-133 479.9 346 71.1
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 8.0e-133 477.6 347 72.3
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 1.4e-132 476.9 346 70.8
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 3.0e-132 475.7 354 69.8
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 5.2e-132 474.9 348 69.8
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 5.2e-132 474.9 347 71.2
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 9.7e-131 470.7 347 70.9
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.7e-130 469.9 347 70.0
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 2.8e-130 469.2 353 69.4
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 4.8e-130 468.4 348 69.8
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 5.3e-129 464.9 347 69.7
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 2.0e-128 463.0 344 68.9
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 1.0e-127 460.7 354 68.9
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 1.9e-126 456.4 348 68.4
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 5.5e-126 454.9 354 66.4
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 5.5e-126 454.9 347 68.9
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 7.2e-126 454.5 354 66.7
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 1.2e-125 453.8 354 68.4
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.6e-125 453.4 350 67.7
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 2.7e-125 452.6 330 69.7
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 3.6e-125 452.2 309 73.5
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 8.0e-125 451.1 356 66.6
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 2.3e-124 449.5 365 64.7
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 6.8e-124 448.0 328 70.7
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 8.8e-124 447.6 330 69.1
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 3.4e-123 445.7 354 65.8
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 4.4e-123 445.3 356 66.9
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 5.7e-123 444.9 344 66.6
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 9.8e-123 444.1 354 65.0
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 4.8e-122 441.8 350 64.9
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 4.8e-122 441.8 343 65.9
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 6.3e-122 441.4 348 66.4
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 8.3e-122 441.0 348 65.8
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 8.3e-122 441.0 348 65.8
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 8.3e-122 441.0 348 65.8
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 8.3e-122 441.0 348 65.8
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 1.8e-121 439.9 348 66.4
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 1.8e-121 439.9 345 68.1
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 4.5e-120 435.3 353 64.6
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 1.7e-119 433.3 353 64.6
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 6.5e-119 431.4 342 66.1
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 6.5e-119 431.4 350 63.1
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 1.5e-118 430.3 347 64.6
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 7.2e-118 427.9 345 64.9
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.6e-117 426.8 302 68.9
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 3.6e-117 425.6 349 64.8
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 1.4e-116 423.7 353 64.0
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.4e-116 423.7 347 63.7
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.2e-115 420.6 346 63.3
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 3.4e-115 419.1 339 63.1
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 5.7e-115 418.3 354 61.9
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 9.8e-115 417.5 330 65.5
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 2.8e-114 416.0 347 62.5
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 3.7e-114 415.6 348 63.5
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 6.3e-114 414.8 348 62.6
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 6.3e-114 414.8 349 63.0
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 1.1e-113 414.1 339 62.8
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 3.1e-113 412.5 348 62.4
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 9.2e-113 411.0 339 62.5
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 1.2e-112 410.6 338 62.4
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 5.9e-112 408.3 351 61.3
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.3e-111 407.1 347 63.4
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.7e-111 406.8 346 61.8
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 3.8e-111 405.6 359 59.1
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 6.6e-111 404.8 298 67.1
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 2.5e-110 402.9 306 67.0
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 9.5e-110 401.0 306 66.3
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 4.7e-109 398.7 346 60.7
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 6.1e-109 398.3 353 59.5
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 1.4e-108 397.1 331 62.8
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 1.8e-108 396.7 348 59.2
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 3.0e-108 396.0 353 60.6
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 1.5e-107 393.7 313 64.9
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 1.7e-106 390.2 355 58.9
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 2.9e-106 389.4 316 63.6
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 2.0e-104 383.3 365 56.4
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.0e-103 380.9 306 62.4
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 2.3e-103 379.8 404 53.7
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 8.3e-98 361.3 348 54.6
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 2.0e-96 356.7 348 56.0
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 2.0e-96 356.7 302 61.3
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 4.6e-96 355.5 269 65.8
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 1.1e-94 350.9 268 65.7
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 5.6e-94 348.6 267 65.9
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 7.5e-91 338.2 355 52.4
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 1.2e-88 330.9 346 51.7
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 1.6e-85 320.5 344 54.7
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.8e-85 319.7 410 47.6
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 4.7e-85 318.9 344 53.8
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 4.9e-82 308.9 271 57.6
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 3.3e-78 296.2 304 53.0
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 7.3e-78 295.0 301 51.5
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 8.4e-66 255.0 266 53.4
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.5e-62 244.2 379 39.3
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 1.9e-57 227.3 213 60.1
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 1.3e-55 221.1 260 47.3
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 1.4e-52 211.1 183 57.9
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 1.7e-50 204.1 133 73.7
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 4.6e-48 196.1 191 58.1
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 4.1e-44 183.0 184 56.0
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.4e-41 174.5 131 64.1
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 5.5e-41 172.6 131 64.1
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.2e-40 171.4 131 62.6
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 2.8e-37 160.2 163 52.8
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 3.1e-36 156.8 126 65.9
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 5.0e-26 122.9 244 35.7
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 4.2e-25 119.8 102 59.8
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 1.0e-23 115.2 92 60.9
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 3.3e-22 110.2 199 33.2
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 2.5e-17 94.0 118 46.6
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 7.0e-12 75.9 64 64.1
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 6.1e-08 62.8 56 55.4
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 1.2e-06 58.5 96 34.4


User provided reference genes

Program Settings