Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G206900 Prunus persica HOM05D000823 ORTHO05D000088 9.4e-68 260.0 126 100.0
Prupe.4G178200 Prunus persica HOM05D000823 ORTHO05D000088 8.0e-51 203.8 110 90.0
RcHm_v2.0_Chr7g0224941 Rosa chinensis HOM05D000823 ORTHO05D000088 1.2e-27 126.7 115 56.5
Prupe.4G178300 Prunus persica HOM05D000823 ORTHO05D000088 6.8e-26 120.9 124 51.6
MD11G1250800 Malus domestica HOM05D000823 ORTHO05D000088 2.6e-25 119.0 112 57.1
Prupe.4G178100 Prunus persica HOM05D000823 ORTHO05D000088 3.8e-24 115.2 107 57.0
FAN18G2538 Fragaria x ananassa HOM05D000823 ORTHO05D000088 6.4e-24 114.4 113 54.9
MD11G1251200 Malus domestica HOM05D000823 ORTHO05D000088 6.4e-24 114.4 110 53.6
Prupe.4G178400 Prunus persica HOM05D000823 ORTHO05D000088 8.4e-24 114.0 111 56.8
FvH4_5g30470 Fragaria vesca HOM05D000823 ORTHO05D000088 1.9e-23 112.8 113 54.0
MD03G1230100 Malus domestica HOM05D000823 ORTHO05D000088 5.4e-23 111.3 112 50.9
Prupe.7G064600 Prunus persica HOM05D000823 ORTHO05D000088 3.5e-22 108.6 108 50.9
FvH4_2g40960 Fragaria vesca HOM05D000823 ORTHO05D000088 1.0e-21 107.1 110 52.7
Prupe.4G178500 Prunus persica HOM05D000823 ORTHO05D000088 1.0e-21 107.1 115 49.6
MD08G1039500 Malus domestica HOM05D000823 ORTHO05D000088 5.1e-21 104.8 112 51.8
Prupe.4G206300 Prunus persica HOM05D000823 ORTHO05D000088 1.1e-20 103.6 109 52.3
MD03G1230200 Malus domestica HOM05D000823 ORTHO05D000088 1.9e-20 102.8 97 52.6
Prupe.4G178000 Prunus persica HOM05D000823 ORTHO05D000088 2.5e-20 102.4 101 53.5
RcHm_v2.0_Chr5g0033041 Rosa chinensis HOM05D000823 ORTHO05D000088 2.5e-20 102.4 116 46.6
FAN20G0318 Fragaria x ananassa HOM05D000823 ORTHO05D000088 7.3e-20 100.9 110 50.9
Prupe.1G388000 Prunus persica HOM05D000823 ORTHO05D000088 7.3e-20 100.9 120 49.2
MD11G1251100 Malus domestica HOM05D000823 ORTHO05D000088 2.1e-19 99.4 101 50.5
MD04G1034500 Malus domestica HOM05D000823 ORTHO05D000088 4.8e-19 98.2 113 47.8
RcHm_v2.0_Chr3g0482191 Rosa chinensis HOM05D000823 ORTHO05D000088 1.1e-18 97.1 109 48.6
RcHm_v2.0_Chr5g0033031 Rosa chinensis HOM05D000823 ORTHO05D000088 5.8e-17 91.3 110 46.4
MD04G1034600 Malus domestica HOM05D000823 ORTHO05D000088 7.6e-17 90.9 106 50.0
FvH4_3g19710 Fragaria vesca HOM05D000823 ORTHO05D000088 9.9e-17 90.5 108 45.4
FAN05G5448 Fragaria x ananassa HOM05D000823 ORTHO05D000088 9.9e-17 90.5 109 46.8
FAN11G2176 Fragaria x ananassa HOM05D000823 ORTHO05D000088 9.9e-17 90.5 108 45.4
RcHm_v2.0_Chr6g0296251 Rosa chinensis HOM05D000823 ORTHO05D000088 1.7e-16 89.7 107 47.7
RcHm_v2.0_Chr1g0318651 Rosa chinensis HOM05D000823 ORTHO05D000088 2.2e-16 89.4 103 48.5
RcHm_v2.0_Chr1g0319011 Rosa chinensis HOM05D000823 ORTHO05D000088 6.4e-16 87.8 103 46.6
FvH4_6g23740 Fragaria vesca HOM05D000823 ORTHO05D000088 1.1e-15 87.0 109 45.9
RcHm_v2.0_Chr6g0299611 Rosa chinensis HOM05D000823 ORTHO05D000088 2.4e-15 85.9 101 47.5
Atru.chr13.592 Acer truncatum HOM05D000823 ORTHO05D000088 4.2e-15 85.1 94 45.7
FAN03G0739 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.6e-14 83.2 107 44.9
FvH4_7g23440 Fragaria vesca HOM05D000823 ORTHO05D000088 3.0e-13 79.0 100 45.0
FAN06G1958 Fragaria x ananassa HOM05D000823 ORTHO05D000088 3.0e-13 79.0 100 45.0
QL02p006491 Quercus lobata HOM05D000823 ORTHO05D000088 8.7e-13 77.4 107 42.1
FAN04G2451 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.1e-12 77.0 112 42.0
FAN06G0999 Fragaria x ananassa HOM05D000823 ORTHO05D000088 3.6e-11 72.0 100 43.0
FvH4_7g01780 Fragaria vesca HOM05D000823 ORTHO05D000088 4.8e-11 71.6 112 35.7
FAN06G1437 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.8e-11 71.6 112 35.7
Dinv26758 Davidia involucrata HOM05D000823 ORTHO05D000088 1.2e-09 67.0 87 40.2
CSS0024635 Camellia sinensis var. sinensis HOM05D009784 ORTHO05D010235 1.5e-09 66.6 77 39.0
FvH4_2g27400 Fragaria vesca HOM05D000823 ORTHO05D000088 3.4e-09 65.5 101 41.6
AT2G24700 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 7.6e-09 64.3 89 40.4
Carub.0004s0418 Capsella rubella HOM05D000888 ORTHO05D000740 1.7e-08 63.2 108 34.3
FAN10G3479 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.2e-08 62.8 87 40.2
FAN15G3412 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.9e-08 62.4 62 54.8
FAN15G3419 Fragaria x ananassa HOM05D000823 ORTHO05D000088 3.8e-08 62.0 101 40.6
FAN24G3249 Fragaria x ananassa HOM05D000823 ORTHO05D000088 8.4e-08 60.8 101 39.6
Aqoxy4G01727 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 1.9e-07 59.7 91 38.5
COL.COLO4_02803 Corchorus olitorius HOM05D056455 ORTHO05D000088 3.2e-07 58.9 74 37.8
Thhalv10000130m.g Eutrema salsugineum HOM05D000888 ORTHO05D000740 3.2e-07 58.9 88 35.2
EL10Ac8g19103 Beta vulgaris HOM05D017700 ORTHO05D000088 9.3e-07 57.4 102 36.3
COL.COLO4_11318 Corchorus olitorius HOM05D056455 ORTHO05D000088 9.3e-07 57.4 76 35.5
Nn6g32142 Nelumbo nucifera HOM05D000823 ORTHO05D000088 9.3e-07 57.4 110 33.6
AL4G15420 Arabidopsis lyrata HOM05D000888 ORTHO05D000740 1.6e-06 56.6 89 37.1
FAN20G0950 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.6e-06 56.6 88 39.8
FAN20G2013 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.6e-06 56.6 88 39.8
Lsat_1_v5_gn_4_8941 Lactuca sativa HOM05D009784 ORTHO05D000088 1.6e-06 56.6 82 30.5
TAR376G0714 Trochodendron aralioides HOM05D000823 ORTHO05D000088 1.6e-06 56.6 94 33.0
Sp4g03680 Schrenkiella parvula HOM05D000888 ORTHO05D000740 2.7e-06 55.8 91 33.0
Ah.09g231430 Amaranthus hybridus HOM05D017700 ORTHO05D000088 6.0e-06 54.7 89 39.3
Migut.D01639 Erythranthe guttata HOM05D000888 ORTHO05D000740 7.9e-06 54.3 71 39.4


User provided reference genes

Program Settings