Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G206600 Prunus persica HOM05D001020 ORTHO05D334095 1.8e-81 305.8 148 100.0
Prupe.5G187200 Prunus persica HOM05D001020 ORTHO05D334884 1.6e-21 106.7 108 50.9
Prupe.8G043600 Prunus persica HOM05D001020 ORTHO05D019284 1.0e-12 77.4 95 42.1
MD03G1055000 Malus domestica HOM05D001020 ORTHO05D030062 1.7e-12 76.6 97 44.3
Prupe.1G152600 Prunus persica HOM05D001020 ORTHO05D019284 1.7e-12 76.6 102 44.1
Prupe.8G033200 Prunus persica HOM05D001020 ORTHO05D019284 3.9e-12 75.5 95 44.2
MD00G1207400 Malus domestica HOM05D001020 ORTHO05D030062 5.1e-12 75.1 95 43.2
MD06G1187900 Malus domestica HOM05D001020 ORTHO05D001137 6.6e-12 74.7 98 41.8
MD12G1072700 Malus domestica HOM05D001020 ORTHO05D030062 1.9e-11 73.2 95 42.1
Prupe.5G159300 Prunus persica HOM05D001020 ORTHO05D036610 1.9e-11 73.2 98 42.9
MD07G1028900 Malus domestica HOM05D001020 ORTHO05D030062 5.6e-11 71.6 71 50.7
Prupe.5G229700 Prunus persica HOM05D001020 ORTHO05D020853 5.6e-11 71.6 104 38.5
MD06G1198700 Malus domestica HOM05D001020 ORTHO05D019284 2.1e-10 69.7 98 50.0
MD06G1162500 Malus domestica HOM05D001020 ORTHO05D036610 6.2e-10 68.2 104 45.2
MD06G1188000 Malus domestica HOM05D001020 ORTHO05D048671 1.8e-09 66.6 95 38.9
Prupe.5G186100 Prunus persica HOM05D001020 ORTHO05D048671 1.8e-09 66.6 74 47.3
Prupe.5G212500 Prunus persica HOM05D001020 ORTHO05D001137 1.8e-09 66.6 74 52.7
Prupe.5G173300 Prunus persica HOM05D001020 ORTHO05D020852 2.4e-09 66.2 115 36.5
FvH4_6g30070 Fragaria vesca HOM05D001020 ORTHO05D001137 3.1e-09 65.9 95 38.9
FAN04G1590 Fragaria x ananassa HOM05D001020 ORTHO05D001137 3.1e-09 65.9 119 38.7
FAN14G1037 Fragaria x ananassa HOM05D001020 ORTHO05D001137 3.1e-09 65.9 95 38.9
Prupe.7G180400 Prunus persica HOM05D001020 ORTHO05D001137 3.1e-09 65.9 86 45.3
MD00G1160400 Malus domestica HOM05D001020 ORTHO05D020853 4.0e-09 65.5 93 45.2
MD14G1168300 Malus domestica HOM05D001020 ORTHO05D036610 5.2e-09 65.1 110 41.8
Prupe.2G155300 Prunus persica HOM05D001020 ORTHO05D019284 8.9e-09 64.3 97 41.2
MD14G1206600 Malus domestica HOM05D001020 ORTHO05D001137 1.2e-08 63.9 99 41.4
Prupe.5G173200 Prunus persica HOM05D001020 ORTHO05D020852 1.2e-08 63.9 104 36.5
Prupe.5G173400 Prunus persica HOM05D001020 ORTHO05D020852 1.2e-08 63.9 104 36.5
FAN05G1076 Fragaria x ananassa HOM05D001020 ORTHO05D001137 2.0e-08 63.2 95 37.9
FAN18G0822 Fragaria x ananassa HOM05D001020 ORTHO05D001137 2.0e-08 63.2 96 40.6
Prupe.4G110200 Prunus persica HOM05D001020 ORTHO05D001137 2.0e-08 63.2 95 41.1
MD15G1442400 Malus domestica HOM05D001020 ORTHO05D020853 2.6e-08 62.8 95 42.1
MD16G1127300 Malus domestica HOM05D001020 ORTHO05D001137 2.6e-08 62.8 95 35.8
FvH4_5g20030 Fragaria vesca HOM05D001020 ORTHO05D001137 4.4e-08 62.0 96 39.6
FAN18G1932 Fragaria x ananassa HOM05D001020 ORTHO05D001137 4.4e-08 62.0 115 39.1
MD13G1126800 Malus domestica HOM05D001020 ORTHO05D001137 4.4e-08 62.0 95 35.8
FAN18G1995 Fragaria x ananassa HOM05D001020 ORTHO05D001137 5.8e-08 61.6 115 39.1
FAN04G0595 Fragaria x ananassa HOM05D001020 ORTHO05D001137 7.6e-08 61.2 96 39.6
FAN13G3310 Fragaria x ananassa HOM05D001020 ORTHO05D001137 7.6e-08 61.2 96 39.6
Prupe.1G218700 Prunus persica HOM05D001020 ORTHO05D001137 7.6e-08 61.2 95 35.8
Prupe.7G060500 Prunus persica HOM05D001020 ORTHO05D001137 7.6e-08 61.2 75 48.0
SalBow5G5676 Salvia bowleyana HOM05D001020 ORTHO05D001137 7.6e-08 61.2 95 36.8
MD10G1031200 Malus domestica HOM05D001020 ORTHO05D248017 9.9e-08 60.8 101 41.6
MD10G1031400 Malus domestica HOM05D001020 ORTHO05D248091 9.9e-08 60.8 101 41.6
Prupe.7G101200 Prunus persica HOM05D001020 ORTHO05D001137 9.9e-08 60.8 75 45.3
QL03p050225 Quercus lobata HOM05D001020 ORTHO05D001137 9.9e-08 60.8 74 45.9
CARHR200260 Cardamine hirsuta HOM05D001020 ORTHO05D001137 1.3e-07 60.5 85 42.4
FvH4_5g12462 Fragaria vesca HOM05D001020 ORTHO05D001137 1.3e-07 60.5 115 38.3
MD00G1095100 Malus domestica HOM05D001020 ORTHO05D001137 1.3e-07 60.5 95 40.0
RcHm_v2.0_Chr7g0185001 Rosa chinensis HOM05D001020 ORTHO05D001137 1.7e-07 60.1 91 42.9
Lj2g0021750 Lotus japonicus HOM05D001020 ORTHO05D001137 2.2e-07 59.7 74 43.2
RcHm_v2.0_Chr2g0136111 Rosa chinensis HOM05D001020 ORTHO05D001137 2.2e-07 59.7 95 35.8
MD00G1097200 Malus domestica HOM05D001020 ORTHO05D246914 2.9e-07 59.3 100 37.0
MD17G1037200 Malus domestica HOM05D001020 ORTHO05D245464 2.9e-07 59.3 74 44.6
Prupe.5G219100 Prunus persica HOM05D001020 ORTHO05D001137 3.8e-07 58.9 96 37.5
RcHm_v2.0_Chr7g0184981 Rosa chinensis HOM05D001020 ORTHO05D001137 3.8e-07 58.9 107 36.4
MD00G1160800 Malus domestica HOM05D001020 ORTHO05D036584 4.9e-07 58.5 104 34.6
QL08p022056 Quercus lobata HOM05D001020 ORTHO05D001137 4.9e-07 58.5 95 36.8
RcHm_v2.0_Chr4g0429291 Rosa chinensis HOM05D001020 ORTHO05D001137 4.9e-07 58.5 74 40.5
RcHm_v2.0_Chr7g0184991 Rosa chinensis HOM05D001020 ORTHO05D001137 4.9e-07 58.5 108 38.0
VMungo1215G0156 Vigna mungo HOM05D001020 ORTHO05D001137 4.9e-07 58.5 95 35.8
DCAR_018409 Daucus carota HOM05D001020 ORTHO05D001137 6.4e-07 58.2 123 30.9
Glyma.01G061800 Glycine max HOM05D001020 ORTHO05D001137 6.4e-07 58.2 96 38.5
Lj2g0015122 Lotus japonicus HOM05D001020 ORTHO05D001137 6.4e-07 58.2 74 43.2
Medtr3g103410 Medicago truncatula HOM05D001020 ORTHO05D001137 6.4e-07 58.2 96 37.5
Carub.0003s2518 Capsella rubella HOM05D001020 ORTHO05D001137 8.4e-07 57.8 88 40.9
Carub.0006s1138 Capsella rubella HOM05D001020 ORTHO05D001137 1.1e-06 57.4 85 44.7
FAN04G3057 Fragaria x ananassa HOM05D001020 ORTHO05D001137 1.1e-06 57.4 101 37.6
PSO421G0430 Papaver somniferum HOM05D001020 ORTHO05D001137 1.1e-06 57.4 95 37.9
Prupe.5G035500 Prunus persica HOM05D001020 ORTHO05D019284 1.1e-06 57.4 95 43.2
Prupe.5G035900 Prunus persica HOM05D001020 ORTHO05D019284 1.1e-06 57.4 95 43.2
SGA_v2.0_scaffold32G12982 Striga asiatica HOM05D001020 ORTHO05D001137 1.1e-06 57.4 99 37.4
Atru.chr11.2407 Acer truncatum HOM05D001020 ORTHO05D001137 1.4e-06 57.0 95 35.8
Ciclev10004503m.g Citrus clementina HOM05D001020 ORTHO05D001137 1.4e-06 57.0 96 37.5
ECA246G1399 Erigeron canadensis HOM05D001020 ORTHO05D001137 1.4e-06 57.0 95 35.8
FvH4_5g12491 Fragaria vesca HOM05D001020 ORTHO05D001137 1.4e-06 57.0 110 37.3
FAN18G0410 Fragaria x ananassa HOM05D001020 ORTHO05D001137 1.4e-06 57.0 110 37.3
FAN18G0912 Fragaria x ananassa HOM05D001020 ORTHO05D001137 1.4e-06 57.0 110 37.3
Gohir.A03G003400 Gossypium hirsutum HOM05D001020 ORTHO05D001137 1.4e-06 57.0 74 41.9
MD05G1260200 Malus domestica HOM05D001020 ORTHO05D001137 1.4e-06 57.0 98 38.8
MD06G1212600 Malus domestica HOM05D001020 ORTHO05D001137 1.4e-06 57.0 95 37.9
MD06G1212700 Malus domestica HOM05D001020 ORTHO05D001137 1.4e-06 57.0 74 41.9
Psat2g131480 Pisum sativum HOM05D001020 ORTHO05D001137 1.4e-06 57.0 74 40.5
Prupe.5G210300 Prunus persica HOM05D001020 ORTHO05D001137 1.4e-06 57.0 103 37.9
RcHm_v2.0_Chr7g0204841 Rosa chinensis HOM05D001020 ORTHO05D001137 1.4e-06 57.0 96 36.5
Medtr5g045160 Medicago truncatula HOM05D001020 ORTHO05D001137 1.9e-06 56.6 74 40.5
QL03p050166 Quercus lobata HOM05D001020 ORTHO05D001137 1.9e-06 56.6 74 41.9
SHI14711 Sapria himalayana HOM05D001020 ORTHO05D001137 1.9e-06 56.6 96 36.5
CARHR148470 Cardamine hirsuta HOM05D001020 ORTHO05D001137 2.4e-06 56.2 78 44.9
Lj2g0019120 Lotus japonicus HOM05D001020 ORTHO05D001137 2.4e-06 56.2 74 41.9
Lalb_Chr17g0341291 Lupinus albus HOM05D001020 ORTHO05D001137 2.4e-06 56.2 95 35.8
MD00G1160900 Malus domestica HOM05D001020 ORTHO05D036584 2.4e-06 56.2 94 39.4
MD06G1229000 Malus domestica HOM05D001020 ORTHO05D036584 2.4e-06 56.2 94 39.4
Phvul.002G119600 Phaseolus vulgaris HOM05D001020 ORTHO05D001137 2.4e-06 56.2 74 40.5
PGR057G0002 Punica granatum HOM05D001020 ORTHO05D001137 2.4e-06 56.2 74 40.5
PGR119G2255 Punica granatum HOM05D001020 ORTHO05D001137 2.4e-06 56.2 74 40.5
BcaB01g01497 Brassica carinata HOM05D001020 ORTHO05D001137 3.2e-06 55.8 99 37.4
Ca_04996_v3 Cicer arietinum L. HOM05D001020 ORTHO05D001137 3.2e-06 55.8 95 34.7
Ah.05g168920 Amaranthus hybridus HOM05D001020 ORTHO05D001137 4.2e-06 55.5 77 40.3
arahy.Tifrunner.gnm1.ann1.3R7UBK Arachis hypogaea HOM05D001020 ORTHO05D001137 4.2e-06 55.5 95 38.9
DCAR_002348 Daucus carota HOM05D001020 ORTHO05D001137 4.2e-06 55.5 96 37.5
ECA246G2777 Erigeron canadensis HOM05D001020 ORTHO05D001137 4.2e-06 55.5 95 34.7
FvH4_5g12490 Fragaria vesca HOM05D001020 ORTHO05D001137 4.2e-06 55.5 111 35.1
FAN18G0521 Fragaria x ananassa HOM05D001020 ORTHO05D001137 4.2e-06 55.5 111 35.1
Manes.09G186000 Manihot esculenta HOM05D001020 ORTHO05D001137 4.2e-06 55.5 77 40.3
VMungo1215G0384 Vigna mungo HOM05D001020 ORTHO05D001137 4.2e-06 55.5 96 36.5
FvH4_4g23010 Fragaria vesca HOM05D001020 ORTHO05D001137 5.4e-06 55.1 74 40.5
Gorai.003G179100 Gossypium raimondii HOM05D001020 ORTHO05D001137 5.4e-06 55.1 74 40.5
Lj2g0005108 Lotus japonicus HOM05D001020 ORTHO05D001137 5.4e-06 55.1 73 41.1
Medtr6g445440 Medicago truncatula HOM05D001020 ORTHO05D001137 5.4e-06 55.1 97 36.1
Prupe.4G045100 Prunus persica HOM05D001020 ORTHO05D001137 5.4e-06 55.1 105 37.1
Prupe.5G219000 Prunus persica HOM05D001020 ORTHO05D001137 5.4e-06 55.1 95 33.7
SGA_v2.0_scaffold21G09627 Striga asiatica HOM05D001020 ORTHO05D001137 5.4e-06 55.1 74 40.5
ECA246G0667 Erigeron canadensis HOM05D001020 ORTHO05D001137 7.1e-06 54.7 95 34.7
Migut.L01909 Erythranthe guttata HOM05D001020 ORTHO05D001137 7.1e-06 54.7 95 34.7
PSO478G2143 Papaver somniferum HOM05D001020 ORTHO05D001137 7.1e-06 54.7 95 35.8
Potri.003G165200 Populus trichocarpa HOM05D001020 ORTHO05D001137 7.1e-06 54.7 74 39.2
A09p28570 Brassica napus HOM05D001020 ORTHO05D001137 9.2e-06 54.3 100 34.0
BraA09t38418Z Brassica rapa HOM05D001020 ORTHO05D001137 9.2e-06 54.3 100 34.0
CSS0048799 Camellia sinensis var. sinensis HOM05D001020 ORTHO05D001137 9.2e-06 54.3 73 42.5
Lalb_Chr17g0341301 Lupinus albus HOM05D001020 ORTHO05D001137 9.2e-06 54.3 95 37.9
Peaxi162Scf00316g00001 Petunia axillaris HOM05D001020 ORTHO05D001137 9.2e-06 54.3 95 35.8


User provided reference genes

Program Settings