Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 2.1e-186 655.6 337 100.0
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 3.0e-145 518.8 339 80.2
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 7.4e-136 487.6 338 76.3
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 5.7e-128 461.5 339 72.3
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 1.7e-127 459.9 342 70.5
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 4.8e-127 458.4 342 70.2
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.2e-117 427.2 338 66.0
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 4.5e-117 425.2 337 65.9
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 1.3e-116 423.7 347 66.0
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 2.3e-116 422.9 341 65.1
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 2.5e-115 419.5 343 66.2
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 8.0e-114 414.5 338 63.9
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 4.0e-113 412.1 347 64.8
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 4.0e-113 412.1 344 64.0
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 3.4e-112 409.1 344 65.1
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 4.4e-112 408.7 341 62.8
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.7e-111 406.8 343 64.4
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 2.2e-111 406.4 341 62.5
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 2.2e-111 406.4 340 65.0
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 8.3e-111 404.4 344 63.7
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 1.8e-110 403.3 339 65.2
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 2.4e-110 402.9 343 64.1
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 5.4e-110 401.7 285 70.5
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 2.0e-109 399.8 344 63.1
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 2.0e-109 399.8 340 61.2
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 2.9e-108 396.0 347 61.7
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 3.9e-108 395.6 349 61.0
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 5.0e-108 395.2 343 59.8
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 5.0e-108 395.2 343 59.8
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 5.0e-108 395.2 338 63.0
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 5.0e-108 395.2 341 61.6
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.1e-107 394.0 341 62.2
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 3.3e-107 392.5 353 60.6
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 7.3e-107 391.3 346 61.6
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 4.7e-106 388.7 342 61.1
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.8e-105 386.7 343 60.1
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 2.3e-105 386.3 342 61.1
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 2.3e-105 386.3 342 60.8
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 8.9e-105 384.4 342 62.6
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.2e-104 384.0 342 60.5
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 1.5e-104 383.6 340 60.9
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 2.6e-104 382.9 330 61.2
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 1.7e-103 380.2 341 61.6
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 4.9e-103 378.6 346 61.0
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 8.3e-103 377.9 344 59.6
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 2.4e-102 376.3 344 60.2
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 2.4e-102 376.3 339 58.7
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 3.2e-102 375.9 339 59.3
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 7.0e-102 374.8 346 58.1
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 1.6e-101 373.6 340 60.0
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.0e-101 373.2 344 58.1
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 2.7e-101 372.9 339 58.4
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 7.8e-101 371.3 343 58.6
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 1.3e-100 370.5 340 59.7
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 6.6e-100 368.2 285 66.0
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.5e-99 367.1 344 57.6
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 1.5e-99 367.1 280 69.6
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 1.9e-99 366.7 342 59.4
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 7.3e-99 364.8 344 58.1
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 9.5e-99 364.4 340 57.9
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 1.2e-98 364.0 340 57.6
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 1.2e-98 364.0 340 58.8
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 3.4e-96 355.9 346 56.6
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 7.5e-96 354.8 344 57.0
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 9.8e-96 354.4 354 57.6
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 1.9e-94 350.1 345 57.4
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 3.5e-93 345.9 276 63.0
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 2.3e-89 333.2 276 61.2
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 2.6e-88 329.7 347 54.8
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 4.4e-88 328.9 280 62.9
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 1.7e-87 327.0 347 53.0
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 3.7e-87 325.9 347 54.5
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 1.4e-86 323.9 305 58.0
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 1.4e-86 323.9 350 53.4
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 4.1e-86 322.4 349 54.7
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 9.2e-86 321.2 347 54.2
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 9.2e-86 321.2 350 54.3
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 6.0e-85 318.5 339 53.7
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 7.8e-85 318.2 347 52.2
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 1.0e-84 317.8 345 53.0
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 1.0e-84 317.8 345 53.0
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 1.3e-84 317.4 346 52.0
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 1.5e-83 313.9 351 52.4
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 3.6e-82 309.3 285 60.4
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 3.6e-82 309.3 308 52.6
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 2.4e-78 296.6 347 52.7
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 2.3e-76 290.0 335 51.9
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 2.4e-73 280.0 332 47.3
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 1.7e-68 263.8 204 64.2
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 1.6e-61 240.7 347 42.1
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 3.0e-60 236.5 227 57.7
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 7.4e-59 231.9 133 88.7
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 3.7e-58 229.6 283 47.0
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 1.2e-53 214.5 183 56.8
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 3.3e-51 206.5 265 41.5
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 4.3e-43 179.5 120 68.3
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 3.1e-33 146.7 264 33.3
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 1.5e-32 144.4 114 65.8
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 1.2e-29 134.8 263 33.1
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 1.5e-27 127.9 253 39.5
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 2.2e-26 124.0 114 57.9
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 5.3e-25 119.4 229 40.2
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 4.5e-24 116.3 134 44.8
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 2.6e-19 100.5 269 27.1
MCO11G003 Micromonas commoda HOM05D007317 ORTHO05D009299 5.0e-15 86.3 280 25.4
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 1.5e-11 74.7 297 25.9
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 4.8e-10 69.7 101 35.6


User provided reference genes

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