Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 2.2e-202 708.8 358 100.0
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 7.7e-99 364.8 390 59.0
MD03G1216800 Malus domestica HOM05D008268 ORTHO05D010144 8.0e-96 354.8 376 59.8
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 6.4e-45 185.7 375 43.2
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 3.8e-37 159.8 358 42.2
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 8.7e-34 148.7 359 39.8
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 5.6e-33 146.0 370 35.9
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 5.6e-33 146.0 379 38.3
RcHm_v2.0_Chr6g0255571 Rosa chinensis HOM05D014484 ORTHO05D017021 1.3e-32 144.8 412 39.3
Prupe.6G133800 Prunus persica HOM05D037566 ORTHO05D010144 3.1e-31 140.2 199 45.7
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 2.6e-30 137.1 381 37.5
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 2.9e-29 133.7 369 37.1
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 1.9e-28 131.0 377 35.8
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 3.2e-28 130.2 322 37.6
FAN27G0943 Fragaria x ananassa HOM05D014484 ORTHO05D017021 5.5e-28 129.4 398 36.9
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 7.1e-28 129.0 368 36.7
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 7.9e-27 125.6 374 36.1
FAN15G0243 Fragaria x ananassa HOM05D014484 ORTHO05D017021 1.0e-26 125.2 394 36.8
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 1.0e-26 125.2 349 37.8
FvH4_2g05340 Fragaria vesca HOM05D014484 ORTHO05D017021 3.9e-26 123.2 399 36.3
FAN24G1810 Fragaria x ananassa HOM05D014484 ORTHO05D017021 3.9e-26 123.2 399 36.3
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 3.3e-25 120.2 355 37.7
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 4.8e-24 116.3 346 35.3
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 1.1e-23 115.2 384 32.6
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 1.4e-23 114.8 327 35.5
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 4.1e-23 113.2 381 32.5
Potri.011G125600 Populus trichocarpa HOM05D019858 ORTHO05D010144 6.9e-23 112.5 378 33.6
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 1.2e-22 111.7 379 31.7
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 1.5e-22 111.3 369 32.8
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 7.7e-22 109.0 382 33.0
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 7.7e-22 109.0 382 33.0
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 1.3e-21 108.2 381 32.0
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 8.5e-21 105.5 355 34.6
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 1.9e-20 104.4 389 31.6
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 3.2e-20 103.6 392 34.2
ClCG11G018600 Citrullus lanatus HOM05D008268 ORTHO05D010144 2.1e-19 100.9 358 33.2
FAN20G1673 Fragaria x ananassa HOM05D014484 ORTHO05D017021 3.9e-18 96.7 287 37.6
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 3.9e-18 96.7 351 32.8
TWI38G2068 Tripterygium wilfordii HOM05D008268 ORTHO05D010144 5.1e-18 96.3 374 32.6
MELO3C018179.2 Cucumis melo HOM05D008268 ORTHO05D010144 2.0e-17 94.4 333 34.5
Sabra11G0111900 Salix brachista HOM05D019858 ORTHO05D010144 2.5e-17 94.0 382 32.5
GSVIVG01014468001 Vitis vinifera HOM05D008268 ORTHO05D010144 2.5e-17 94.0 244 40.2
CANSAT11G1352 Cannabis sativa HOM05D008268 ORTHO05D010144 5.7e-17 92.8 423 32.2
CsaV3_3G044260 Cucumis sativus L. HOM05D008268 ORTHO05D010144 5.3e-15 86.3 371 31.5
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 5.3e-15 86.3 365 32.3
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 9.1e-15 85.5 326 32.8
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 2.6e-14 84.0 294 33.0
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 5.9e-14 82.8 316 34.8
Nn1g03824 Nelumbo nucifera HOM05D008268 ORTHO05D010144 1.1e-12 78.6 287 34.1
RhsimUnG0257100 Rhododendron simsii HOM05D047612 ORTHO05D010144 7.2e-12 75.9 374 31.0
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 1.6e-11 74.7 276 33.0
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 2.7e-11 73.9 327 31.5
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 3.6e-11 73.6 328 31.4
Eucgr.F01065 Eucalyptus grandis HOM05D008268 ORTHO05D010144 4.7e-11 73.2 238 35.3
PGR083G1493 Punica granatum HOM05D008268 ORTHO05D010144 4.7e-11 73.2 270 33.7
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 6.1e-11 72.8 328 30.2
Prupe.6G133900 Prunus persica HOM05D037566 ORTHO05D010144 1.0e-10 72.0 66 57.6
Sed0023643 Sechium edule HOM05D008268 ORTHO05D010144 1.8e-10 71.2 337 30.6
arahy.Tifrunner.gnm1.ann1.Y898LB Arachis hypogaea HOM05D008268 ORTHO05D010144 2.3e-10 70.9 327 30.0
Medtr2g081240 Medicago truncatula HOM05D008268 ORTHO05D010144 3.9e-10 70.1 349 27.8
Migut.M01849 Erythranthe guttata HOM05D008268 ORTHO05D010144 2.6e-09 67.4 280 32.1
TPR.G32855 Trifolium pratense HOM05D008268 ORTHO05D010144 3.3e-09 67.0 233 36.5
Sabra15G0071800 Salix brachista HOM05D019858 ORTHO05D010144 5.7e-09 66.2 233 33.9
Psat5g247560 Pisum sativum HOM05D008268 ORTHO05D010144 7.4e-09 65.9 368 28.8
THA.LOC104799901 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 7.4e-09 65.9 327 29.1
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 1.7e-08 64.7 380 27.1
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 3.7e-08 63.5 348 27.0
Sopen07g031850 Solanum pennellii HOM05D015394 ORTHO05D017774 3.7e-08 63.5 271 28.0
Solyc07g063670.2 Solanum lycopersicum HOM05D015394 ORTHO05D017774 4.8e-08 63.2 346 25.7
Peaxi162Scf00000g07812 Petunia axillaris HOM05D015394 ORTHO05D017774 1.1e-07 62.0 344 29.1
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 5.3e-07 59.7 376 27.1
Ca_01792_v3 Cicer arietinum L. HOM05D008268 ORTHO05D010144 1.2e-06 58.5 101 42.6
SHI51816 Sapria himalayana HOM05D008268 ORTHO05D010144 1.2e-06 58.5 413 26.6
CDE02G2061 Ceratophyllum demersum HOM05D057939 ORTHO05D010144 1.5e-06 58.2 68 52.9
THA.LOC104809278 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 7.7e-06 55.8 312 28.8


User provided reference genes

Program Settings