Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G190300 Prunus persica HOM05D007566 ORTHO05D009505 2.8e-43 178.3 99 100.0
MD11G1237100 Malus domestica HOM05D007566 ORTHO05D009505 5.7e-36 154.1 99 86.9
RcHm_v2.0_Chr5g0035981 Rosa chinensis HOM05D007566 ORTHO05D009505 2.9e-32 141.7 99 80.8
FvH4_3g21000 Fragaria vesca HOM05D007566 ORTHO05D009505 3.8e-32 141.4 99 79.8
FAN11G3987 Fragaria x ananassa HOM05D007566 ORTHO05D009505 3.8e-32 141.4 99 79.8
FAN25G3649 Fragaria x ananassa HOM05D007566 ORTHO05D009505 4.3e-31 137.9 99 77.8
FAN21G0859 Fragaria x ananassa HOM05D007566 ORTHO05D009505 2.0e-25 119.0 99 70.7
Manes.15G083200 Manihot esculenta HOM05D007566 ORTHO05D009505 3.9e-24 114.8 99 67.7
Duzib213G0757 Durio zibethinus HOM05D007566 ORTHO05D009505 2.5e-23 112.1 100 65.0
Atru.chr2.2863 Acer truncatum HOM05D007566 ORTHO05D009505 7.3e-23 110.5 99 66.7
CiPaw.11G176600 Carya illinoinensis HOM05D007566 ORTHO05D009505 2.1e-22 109.0 100 67.0
TWI39G1107 Tripterygium wilfordii HOM05D007566 ORTHO05D009505 1.1e-21 106.7 99 64.6
MELO3C016554.2 Cucumis melo HOM05D007566 ORTHO05D009505 1.4e-21 106.3 100 64.0
CANSAT11G1965 Cannabis sativa HOM05D007566 ORTHO05D009505 6.8e-21 104.0 100 63.0
COL.COLO4_09480 Corchorus olitorius HOM05D007566 ORTHO05D009505 2.0e-20 102.4 100 61.0
Dinv08341 Davidia involucrata HOM05D007566 ORTHO05D009505 2.0e-20 102.4 98 65.3
Ciclev10010014m.g Citrus clementina HOM05D007566 ORTHO05D009505 4.4e-20 101.3 100 63.0
Sabra16G0268300 Salix brachista HOM05D007566 ORTHO05D009505 5.8e-20 100.9 100 66.0
Sabra16G0270600 Salix brachista HOM05D007566 ORTHO05D009505 5.8e-20 100.9 100 66.0
Thecc.07G071100 Theobroma cacao HOM05D007566 ORTHO05D009505 5.8e-20 100.9 101 63.4
CsaV3_3G005960 Cucumis sativus L. HOM05D007566 ORTHO05D009505 2.2e-19 99.0 100 62.0
Potri.001G406900 Populus trichocarpa HOM05D007566 ORTHO05D009505 3.7e-19 98.2 100 64.0
Lj3g0013461 Lotus japonicus HOM05D007566 ORTHO05D009505 1.1e-18 96.7 100 62.0
TAR627G0519 Trochodendron aralioides HOM05D007566 ORTHO05D009505 1.9e-18 95.9 100 61.0
Psat5g246560 Pisum sativum HOM05D007566 ORTHO05D009505 2.4e-18 95.5 101 60.4
Glyma.12G219500 Glycine max HOM05D007566 ORTHO05D009505 4.1e-18 94.7 102 59.8
Phvul.005G086000 Phaseolus vulgaris HOM05D007566 ORTHO05D009505 4.1e-18 94.7 101 57.4
PGR083G0896 Punica granatum HOM05D007566 ORTHO05D009505 4.1e-18 94.7 100 59.0
TPR.G32847 Trifolium pratense HOM05D007566 ORTHO05D009505 7.0e-18 94.0 101 59.4
GSVIVG01014436001 Vitis vinifera HOM05D007566 ORTHO05D009505 7.0e-18 94.0 103 57.3
Lalb_Chr25g0286741 Lupinus albus HOM05D007566 ORTHO05D009505 9.2e-18 93.6 101 57.4
Glyma.13G281800 Glycine max HOM05D007566 ORTHO05D009505 1.2e-17 93.2 102 59.8
EL10Ac4g08058 Beta vulgaris HOM05D007566 ORTHO05D009505 6.0e-17 90.9 100 59.0
Nitab4.5_0000297g0110 Nicotiana tabacum HOM05D007566 ORTHO05D009505 1.0e-16 90.1 99 56.6
Cc05_g12690 Coffea canephora HOM05D007566 ORTHO05D009505 1.7e-16 89.4 102 59.8
Gorai.002G076000 Gossypium raimondii HOM05D007566 ORTHO05D009505 1.7e-16 89.4 100 56.0
Medtr2g080990 Medicago truncatula HOM05D007566 ORTHO05D009505 1.1e-15 86.7 104 57.7
Gohir.D01G055900 Gossypium hirsutum HOM05D007566 ORTHO05D009505 1.5e-15 86.3 100 55.0
Hma1.2p1_3251F.1_g334500 Hydrangea macrophylla HOM05D007566 ORTHO05D009505 1.9e-15 85.9 106 60.4
TAR371G0602 Trochodendron aralioides HOM05D007566 ORTHO05D009505 2.5e-15 85.5 102 57.8
Eucgr.F01078 Eucalyptus grandis HOM05D007566 ORTHO05D009505 4.3e-15 84.7 101 58.4
Oeu030434.1 Olea europaea HOM05D007566 ORTHO05D009505 7.3e-15 84.0 104 56.7
Gohir.A01G068600 Gossypium hirsutum HOM05D007566 ORTHO05D009505 1.2e-14 83.2 100 54.0
DCAR_009984 Daucus carota HOM05D007566 ORTHO05D009505 1.6e-14 82.8 103 55.3
Sc16g0006770 Simmondsia chinensis HOM05D007566 ORTHO05D009505 1.6e-14 82.8 99 54.5
Solyc07g063575.1 Solanum lycopersicum HOM05D007566 ORTHO05D009505 1.6e-14 82.8 99 56.6
Sopen07g031760 Solanum pennellii HOM05D007566 ORTHO05D009505 1.6e-14 82.8 99 56.6
Actinidia39409 Actinidia chinensis HOM05D007566 ORTHO05D009505 2.8e-14 82.0 102 57.8
Ah.04g165410 Amaranthus hybridus HOM05D007566 ORTHO05D009505 2.8e-14 82.0 100 58.0
Rhsim06G0192900 Rhododendron simsii HOM05D007566 ORTHO05D009505 2.8e-14 82.0 104 59.6
ClCG10G006500 Citrullus lanatus HOM05D007566 ORTHO05D009505 3.6e-14 81.6 100 53.0
PGSC0003DMG401019249 Solanum tuberosum HOM05D007566 ORTHO05D009505 3.6e-14 81.6 99 55.6
Hund23375 Selenicereus undatus HOM05D007566 ORTHO05D009505 4.7e-14 81.3 103 58.3
arahy.Tifrunner.gnm1.ann1.MQ63GR Arachis hypogaea HOM05D007566 ORTHO05D009505 1.4e-13 79.7 108 52.8
arahy.Tifrunner.gnm1.ann1.YDUQ9T Arachis hypogaea HOM05D007566 ORTHO05D009505 1.4e-13 79.7 108 53.7
Cpa.g.sc389.3 Carica papaya HOM05D007566 ORTHO05D009505 1.8e-13 79.3 100 56.0
THA.LOC104811846 Tarenaya hassleriana HOM05D007566 ORTHO05D009505 3.1e-13 78.6 101 51.5
Aa31LG5G10140 Aethionema arabicum HOM05D007566 ORTHO05D009505 5.2e-13 77.8 103 52.4
PSO541G1909 Papaver somniferum HOM05D007566 ORTHO05D009505 5.2e-13 77.8 101 51.5
ECA246G4377 Erigeron canadensis HOM05D007566 ORTHO05D009505 8.9e-13 77.0 101 54.5
Aqoxy1G02746 Aquilegia oxysepala HOM05D007566 ORTHO05D009505 1.5e-12 76.3 99 56.6
Migut.M01859 Erythranthe guttata HOM05D007566 ORTHO05D009505 1.5e-12 76.3 100 53.0
Nitab4.5_0008686g0030 Nicotiana tabacum HOM05D007566 ORTHO05D009505 2.0e-12 75.9 99 51.5
HanXRQChr05g0151621 Helianthus annuus HOM05D007566 ORTHO05D009505 4.4e-12 74.7 102 54.9
Lsat_1_v5_gn_5_6820 Lactuca sativa HOM05D007566 ORTHO05D009505 9.9e-12 73.6 102 56.9
SGA_v2.0_scaffold73G24317 Striga asiatica HOM05D007566 ORTHO05D009505 1.7e-11 72.8 120 50.0
Nn1g03914 Nelumbo nucifera HOM05D007566 ORTHO05D009505 2.9e-11 72.0 100 50.0
BraA01t01804Z Brassica rapa HOM05D007566 ORTHO05D009505 3.7e-11 71.6 104 51.0
PSO675G4296 Papaver somniferum HOM05D007566 ORTHO05D009505 3.7e-11 71.6 101 48.5
GSVIVG01014434001 Vitis vinifera HOM05D007566 ORTHO05D009505 5.4e-10 67.8 90 50.0
Zm00001eb106900 Zea mays HOM05D007566 ORTHO05D009505 5.4e-10 67.8 111 50.5
BcaNung07200 Brassica carinata HOM05D007566 ORTHO05D009505 7.1e-10 67.4 105 49.5
C01p23510 Brassica napus HOM05D007566 ORTHO05D009505 7.1e-10 67.4 105 49.5
BolC1t02296H Brassica oleracea HOM05D007566 ORTHO05D009505 7.1e-10 67.4 105 49.5
AUR62015600 Chenopodium quinoa HOM05D007566 ORTHO05D009505 7.1e-10 67.4 100 51.0
TWI38G1712 Tripterygium wilfordii HOM05D007566 ORTHO05D009505 7.1e-10 67.4 186 33.3
A01p18560 Brassica napus HOM05D007566 ORTHO05D009505 1.2e-09 66.6 105 50.5
Sp7g25310 Schrenkiella parvula HOM05D007566 ORTHO05D009505 2.7e-09 65.5 103 46.6
Solyc10g047330.1 Solanum lycopersicum HOM05D007566 ORTHO05D009505 1.0e-08 63.5 99 48.5
unitig_0.g2051 Utricularia gibba HOM05D007566 ORTHO05D009505 1.3e-08 63.2 107 46.7
vmacro11813 Vaccinium macrocarpon HOM05D007566 ORTHO05D009505 2.3e-08 62.4 54 70.4
BcaNung03032 Brassica carinata HOM05D007566 ORTHO05D009505 6.6e-08 60.8 104 48.1
CDE05G3101 Ceratophyllum demersum HOM05D007566 ORTHO05D009505 1.5e-07 59.7 101 47.5
MSTRG.15205 Avicennia marina HOM05D007566 ORTHO05D009505 2.1e-06 55.8 104 48.1
CARHR235050 Cardamine hirsuta HOM05D007566 ORTHO05D009505 8.1e-06 53.9 108 44.4


User provided reference genes

Program Settings