Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G189500 Prunus persica HOM05D010293 ORTHO05D009871 3.2e-113 411.8 208 100.0
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 2.6e-38 162.9 134 64.2
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 2.7e-27 126.3 125 52.8
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 1.5e-25 120.6 147 49.0
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 1.5e-25 120.6 147 49.0
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 2.1e-24 116.7 147 46.9
RcHm_v2.0_Chr5g0035311 Rosa chinensis HOM05D010293 ORTHO05D009871 4.8e-16 89.0 142 39.4
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 7.6e-14 81.6 147 34.7
MD11G1237800 Malus domestica HOM05D010293 ORTHO05D009871 9.9e-14 81.3 85 49.4
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 2.7e-11 73.2 149 36.9
FAN25G1744 Fragaria x ananassa HOM05D010293 ORTHO05D009871 2.7e-11 73.2 90 50.0
RcHm_v2.0_Chr5g0035271 Rosa chinensis HOM05D010293 ORTHO05D009871 3.5e-11 72.8 175 36.0
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 7.9e-11 71.6 112 33.9
RcHm_v2.0_Chr5g0035261 Rosa chinensis HOM05D010293 ORTHO05D009871 7.9e-11 71.6 84 52.4
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 6.7e-10 68.6 146 34.9
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 2.5e-09 66.6 139 31.7
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 3.3e-09 66.2 151 35.8
THA.LOC104799910 Tarenaya hassleriana HOM05D008666 ORTHO05D009871 5.6e-09 65.5 152 30.9
Prupe.2G133200 Prunus persica HOM05D027201 ORTHO05D008897 1.3e-08 64.3 51 58.8
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 2.1e-08 63.5 144 34.0
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 6.2e-08 62.0 158 32.9
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 1.1e-07 61.2 118 35.6
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 1.1e-07 61.2 99 38.4
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 1.4e-07 60.8 103 38.8
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 1.8e-07 60.5 119 32.8
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 2.4e-07 60.1 147 29.3
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 1.5e-06 57.4 142 31.0
Oeu008031.1 Olea europaea HOM05D052362 ORTHO05D009871 2.0e-06 57.0 77 42.9
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 2.6e-06 56.6 120 33.3
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 3.4e-06 56.2 139 30.9
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 7.6e-06 55.1 141 29.8


User provided reference genes

Program Settings