Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.4G189400 Prunus persica HOM05D010293 ORTHO05D009871 5.8e-76 287.7 172 100.0
Prupe.4G189500 Prunus persica HOM05D010293 ORTHO05D009871 5.6e-39 164.9 134 64.2
MD03G1219600 Malus domestica HOM05D010293 ORTHO05D009871 4.9e-35 151.8 163 65.6
FAN21G2602 Fragaria x ananassa HOM05D001272 ORTHO05D001843 1.9e-26 123.2 147 49.0
FvH4_3g20890 Fragaria vesca HOM05D010293 ORTHO05D009871 1.2e-25 120.6 147 49.0
FAN11G0092 Fragaria x ananassa HOM05D010293 ORTHO05D009871 1.2e-25 120.6 147 49.0
RcHm_v2.0_Chr5g0035311 Rosa chinensis HOM05D010293 ORTHO05D009871 1.2e-20 104.0 131 43.5
QL08p018353 Quercus lobata HOM05D010293 ORTHO05D009871 3.8e-19 99.0 129 42.6
MD11G1237800 Malus domestica HOM05D010293 ORTHO05D009871 8.5e-19 97.8 84 56.0
CiPaw.11G176000 Carya illinoinensis HOM05D008666 ORTHO05D009871 4.4e-15 85.5 130 41.5
CANSAT11G1747 Cannabis sativa HOM05D008666 ORTHO05D009871 5.7e-15 85.1 88 45.5
Hma1.2p1_1003F.1_g246770 Hydrangea macrophylla HOM05D008666 ORTHO05D009871 3.7e-14 82.4 109 40.4
Actinidia18749 Actinidia chinensis HOM05D008666 ORTHO05D009871 6.3e-14 81.6 130 39.2
Dinv08338 Davidia involucrata HOM05D008666 ORTHO05D009871 1.4e-13 80.5 130 39.2
QL93p2023_0014 Quercus lobata HOM05D010293 ORTHO05D009871 2.4e-13 79.7 89 46.1
Haze_09525 Corylus avellana HOM05D008666 ORTHO05D009871 5.3e-13 78.6 135 37.8
Thecc.07G071900 Theobroma cacao HOM05D008666 ORTHO05D009871 1.5e-12 77.0 138 35.5
QL93p2023_0047 Quercus lobata HOM05D010293 ORTHO05D009871 2.0e-12 76.6 121 38.8
QL08p018333 Quercus lobata HOM05D010293 ORTHO05D009871 5.9e-12 75.1 126 34.1
Cc05_g12640 Coffea canephora HOM05D008666 ORTHO05D009871 7.7e-12 74.7 110 42.7
COL.COLO4_09475 Corchorus olitorius HOM05D008666 ORTHO05D009871 1.7e-11 73.6 141 36.2
Ciclev10009573m.g Citrus clementina HOM05D008666 ORTHO05D009871 2.2e-11 73.2 137 35.0
Potri.008G084200 Populus trichocarpa HOM05D008666 ORTHO05D009871 3.8e-11 72.4 135 36.3
MBI18_g11119_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.1e-10 70.9 76 44.7
RcHm_v2.0_Chr5g0035271 Rosa chinensis HOM05D010293 ORTHO05D009871 1.1e-10 70.9 82 46.3
Oeu030433.2 Olea europaea HOM05D008666 ORTHO05D009871 1.4e-10 70.5 96 42.7
Cc10_g08880 Coffea canephora HOM05D008666 ORTHO05D009871 2.1e-09 66.6 107 40.2
MBI18_g11118_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 1.0e-08 64.3 77 40.3
Migut.H01908 Erythranthe guttata HOM05D008666 ORTHO05D009871 1.8e-08 63.5 135 30.4
Hund16095 Selenicereus undatus HOM05D014664 ORTHO05D009871 1.8e-08 63.5 125 27.2
Oeu008031.1 Olea europaea HOM05D052362 ORTHO05D009871 2.3e-08 63.2 85 43.5
PGSC0003DMG402008565 Solanum tuberosum HOM05D008666 ORTHO05D009871 2.3e-08 63.2 117 32.5
Oeu008032.1 Olea europaea HOM05D008666 ORTHO05D009871 3.9e-08 62.4 115 34.8
TAR599G0004 Trochodendron aralioides HOM05D008666 ORTHO05D009871 5.2e-08 62.0 91 39.6
Gohir.D13G148800 Gossypium hirsutum HOM05D001272 ORTHO05D001843 1.5e-07 60.5 161 31.1
Gorai.013G166500 Gossypium raimondii HOM05D001272 ORTHO05D001843 2.0e-07 60.1 161 29.8
MBI18_g11116_MAGBIO Magnolia biondii HOM05D008666 ORTHO05D009871 2.0e-07 60.1 92 35.9
Solyc12g013530.2 Solanum lycopersicum HOM05D008666 ORTHO05D009871 2.0e-07 60.1 116 33.6
Nitab4.5_0005141g0060 Nicotiana tabacum HOM05D008666 ORTHO05D009871 2.6e-07 59.7 115 29.6
MSTRG.14377 Avicennia marina HOM05D008666 ORTHO05D009871 1.3e-06 57.4 110 32.7
FAN25G1744 Fragaria x ananassa HOM05D010293 ORTHO05D009871 1.3e-06 57.4 90 42.2
Sopen12g006880 Solanum pennellii HOM05D008666 ORTHO05D009871 1.3e-06 57.4 116 33.6
Cpa.g.sc80.110 Carica papaya HOM05D048510 ORTHO05D009871 2.2e-06 56.6 129 31.8
Nn1g06738 Nelumbo nucifera HOM05D008666 ORTHO05D009871 3.7e-06 55.8 89 39.3
AUR62026950 Chenopodium quinoa HOM05D014664 ORTHO05D009871 6.3e-06 55.1 130 24.6


User provided reference genes

Program Settings